Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15668781

Identifier: 15668781

GI number: 15668781

Start: 532160

End: 532963

Strand: Direct

Name: 15668781

Synonym: MJ0601

Alternate gene names: NA

Gene position: 532160-532963 (Clockwise)

Preceding gene: 15668780

Following gene: 15668791

Centisome position: 31.96

GC content: 37.69

Gene sequence:

>804_bases
ATGGTGAATCTAATGAATATAAAGGATATAAAGTTGAATGCAGATGAAACAAAAACAACTAAAGCTATATTGAAGGCAAG
CTTTGATATGTGGTTAGATATTGTTGAAGCTGATGTTGTTATAGTTGGAGCTGGACCAAGTGGTTTAACATGTGCGAGAT
ATTTGGCAAAAGAGGGCTTTAAAGTCGTTGTTTTAGAGAGGCATTTAGCATTTGGTGGAGGAACCTGGGGAGGAGGAATG
GGCTTCCCATACATTGTTGTTGAAGAGCCAGCTGATGAGTTGTTGAGAGAGGTTGGAATTAAGTTAATTGATATGGGAGA
TGGTTATTACGTTGCTGACTCTGTTGAAGTTCCTGCCAAATTGGCAGTTGCAGCAATGGATGCTGGAGCTAAAATATTGA
CTGGAATTGTTGTTGAAGATTTAATTTTAAGAGAGGATGGAGTTGCGGGGGTTGTTATAAACAGCTATGCAATTGAAAGG
GCTGGATTGCATATTGACCCATTGACTATAAGAAGTAAAGTTGTAGTTGATGCTACTGGGCATGAGGCTTCAATAGTTAA
TATCCTTGTAAAAAAGAACAAGTTAGAGGCAGATGTTCCTGGAGAAAAATCAATGTGGGCTGAAAAGGGAGAAAATGCAT
TATTAAGAAACACAAGAGAAGTTTATCCAAATCTATTTGTTTGTGGAATGGCTGCCAATGCCTCTCATGGCGGATACAGA
ATGGGGGCAATATTTGGTGGAATGTATTTATCAGGGAAATTATGTGCAGAATTAATTACTGAAAAGTTGAAAAATAAAGA
ATAA

Upstream 100 bases:

>100_bases
AAATTGTGAATGATACCATTATTCAATTTCCAAAATGTATAAAAACTTGATCTTGAAAATAATATTGAAACTAAACTTTA
AATAATATTAAAAATTACAG

Downstream 100 bases:

>100_bases
TTTTAATTTTTTATACTCTCTTTTAATAAAACAATCTGCTCTCTCAATTTGTGATTTCCCACTTTTCTGGCAATATTTAA
AATTGATTCAATCTCTTCAT

Product: ribulose-1,5-biphosphate synthetase

Products: NA

Alternate protein names: Ribulose 1,5-bisphosphate synthase; RuBP synthase

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MVNLMNIKDIKLNADETKTTKAILKASFDMWLDIVEADVVIVGAGPSGLTCARYLAKEGFKVVVLERHLAFGGGTWGGGM
GFPYIVVEEPADELLREVGIKLIDMGDGYYVADSVEVPAKLAVAAMDAGAKILTGIVVEDLILREDGVAGVVINSYAIER
AGLHIDPLTIRSKVVVDATGHEASIVNILVKKNKLEADVPGEKSMWAEKGENALLRNTREVYPNLFVCGMAANASHGGYR
MGAIFGGMYLSGKLCAELITEKLKNKE

Sequences:

>Translated_267_residues
MVNLMNIKDIKLNADETKTTKAILKASFDMWLDIVEADVVIVGAGPSGLTCARYLAKEGFKVVVLERHLAFGGGTWGGGM
GFPYIVVEEPADELLREVGIKLIDMGDGYYVADSVEVPAKLAVAAMDAGAKILTGIVVEDLILREDGVAGVVINSYAIER
AGLHIDPLTIRSKVVVDATGHEASIVNILVKKNKLEADVPGEKSMWAEKGENALLRNTREVYPNLFVCGMAANASHGGYR
MGAIFGGMYLSGKLCAELITEKLKNKE
>Mature_267_residues
MVNLMNIKDIKLNADETKTTKAILKASFDMWLDIVEADVVIVGAGPSGLTCARYLAKEGFKVVVLERHLAFGGGTWGGGM
GFPYIVVEEPADELLREVGIKLIDMGDGYYVADSVEVPAKLAVAAMDAGAKILTGIVVEDLILREDGVAGVVINSYAIER
AGLHIDPLTIRSKVVVDATGHEASIVNILVKKNKLEADVPGEKSMWAEKGENALLRNTREVYPNLFVCGMAANASHGGYR
MGAIFGGMYLSGKLCAELITEKLKNKE

Specific function: Catalyzes the conversion of ribose 1,5-bisphosphate to ribulose 1,5-bisphosphate (RuBP), the CO(2) acceptor and substrate for RubisCO

COG id: COG1635

COG function: function code H; Flavoprotein involved in thiazole biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the THI4 family

Homologues:

Organism=Saccharomyces cerevisiae, GI6321583, Length=280, Percent_Identity=28.9285714285714, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUBPS_METJA (Q58018)

Other databases:

- EMBL:   L77117
- PIR:   A64375
- RefSeq:   NP_247583.1
- ProteinModelPortal:   Q58018
- GeneID:   1451466
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0601
- NMPDR:   fig|243232.1.peg.620
- TIGR:   MJ0601
- HOGENOM:   HBG325902
- OMA:   GLHVDPL
- ProtClustDB:   PRK04176
- BioCyc:   MJAN243232:MJ_0601-MONOMER
- HAMAP:   MF_00304
- InterPro:   IPR003042
- InterPro:   IPR002922
- InterPro:   IPR022828
- PRINTS:   PR00420
- TIGRFAMs:   TIGR00292

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28656; Mature: 28656

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNLMNIKDIKLNADETKTTKAILKASFDMWLDIVEADVVIVGAGPSGLTCARYLAKEGF
CCEECEEEEEEECCCCHHHHHHHHHHHHHHHHEEEEECEEEEECCCCCHHHHHHHHHCCC
KVVVLERHLAFGGGTWGGGMGFPYIVVEEPADELLREVGIKLIDMGDGYYVADSVEVPAK
EEEEEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHCCCEEEECCCCEEEECCCCCCHH
LAVAAMDAGAKILTGIVVEDLILREDGVAGVVINSYAIERAGLHIDPLTIRSKVVVDATG
EEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECEEHHHCCCEECCEEEEEEEEEEECC
HEASIVNILVKKNKLEADVPGEKSMWAEKGENALLRNTREVYPNLFVCGMAANASHGGYR
CCCEEEEEEEECCCCCCCCCCCHHHHHHCCCCHHHHCHHHHCCCEEEEEEECCCCCCCEE
MGAIFGGMYLSGKLCAELITEKLKNKE
HHHHHCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MVNLMNIKDIKLNADETKTTKAILKASFDMWLDIVEADVVIVGAGPSGLTCARYLAKEGF
CCEECEEEEEEECCCCHHHHHHHHHHHHHHHHEEEEECEEEEECCCCCHHHHHHHHHCCC
KVVVLERHLAFGGGTWGGGMGFPYIVVEEPADELLREVGIKLIDMGDGYYVADSVEVPAK
EEEEEEEEEECCCCCCCCCCCCCEEEEECCHHHHHHHCCCEEEECCCCEEEECCCCCCHH
LAVAAMDAGAKILTGIVVEDLILREDGVAGVVINSYAIERAGLHIDPLTIRSKVVVDATG
EEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEEECEEHHHCCCEECCEEEEEEEEEEECC
HEASIVNILVKKNKLEADVPGEKSMWAEKGENALLRNTREVYPNLFVCGMAANASHGGYR
CCCEEEEEEEECCCCCCCCCCCHHHHHHCCCCHHHHCHHHHCCCEEEEEEECCCCCCCEE
MGAIFGGMYLSGKLCAELITEKLKNKE
HHHHHCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087