Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is mjaIIIM
Identifier: 15668778
GI number: 15668778
Start: 529634
End: 530503
Strand: Direct
Name: mjaIIIM
Synonym: MJ0598
Alternate gene names: 15668778
Gene position: 529634-530503 (Clockwise)
Preceding gene: 15668777
Following gene: 15668779
Centisome position: 31.81
GC content: 27.82
Gene sequence:
>870_bases ATGGAAGTTAAACCTTTTTTAAAATGGGCTGGAGGAAAAACACAAATTTTAAGTCAAATAGAAGAAAATTTACCAAAAGA ATTGAAGGAAGGAAACATTAAAAAATATATAGAACCCTTTGTTGGTGGAGGGGCAGTTTTATTTTACCTTTTACAAAAAT ACGAATTTAAAAAAGTTATTATCAGTGATATTAACGAGGATTTGATGCTATGCTATAAAGTTGTTAAAAATGATGTCGAT AGATTAATTGAGGAGTTATCATCCTTAAGGGATGAATTTTTATCATTGGATGAAGAAAAAAGGAAAGAATTTTATTATAA AGTTAGAGATGACTTTAACAAAAACAAGAATGATTGTGATGAAGTTAAAAGAGTGGCACAGTTTATATTTTTAAATAAAA CATGTTATAATGGGCTATATAGGGTTAATAAAAAAGGAGAATTTAATGTTCCTTATGGAAGGTATAAAAACCCAAAGATT TTTGATGAACAAAATTTGAAAAATGTTTCAAAATTATTAAAGAACGTTAAAATCCTCTGTGGAGATTTTGAGATTGTTGA TGAGTATGTTGATGCTGAAAGCTTTGTTTATTTCGATCCACCATATAAGCCGTTAAATAAAACATCTTCCTTCACATCCT ATACAAAGTATGATTTTAACGATGATGATCAAATTAGATTGGCAAAATTTTATAGAAAATTGGATAAAAGAGGGGCTAAG TTGATGTTAAGCAACTCTTATAATGTTGATTTCTTTGGAAAGCTTTATGAGGGCTTTAATATAAAAAAGGTTGTTGCTAA GAGGATGATTAACTGCAAAGGAGATAAAAGAAAAGATGGTATATATGAGTTATTGATTATGAATTATTGA
Upstream 100 bases:
>100_bases GTTGAGGAGCTTAGAGAAAATATAAATGAGAGAATAGAAAGTTATGTATCTAAAGTTTTAAGGAAGATTAAAGCCAGTTA ATCTAATTTTTTGGGATAAA
Downstream 100 bases:
>100_bases ATAATTTTAAGGTGATTTAATGCAAATAAAGCCATTTGAAGAGAATAAGCCCTATCCAGAATGGGATCCAGATGAGCCAG ATAAAGTCCCAGGAATTCCT
Product: type II R/M system modification methyltransferase
Products: NA
Alternate protein names: M.MjaIII; Adenine-specific methyltransferase MjaIII
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MEVKPFLKWAGGKTQILSQIEENLPKELKEGNIKKYIEPFVGGGAVLFYLLQKYEFKKVIISDINEDLMLCYKVVKNDVD RLIEELSSLRDEFLSLDEEKRKEFYYKVRDDFNKNKNDCDEVKRVAQFIFLNKTCYNGLYRVNKKGEFNVPYGRYKNPKI FDEQNLKNVSKLLKNVKILCGDFEIVDEYVDAESFVYFDPPYKPLNKTSSFTSYTKYDFNDDDQIRLAKFYRKLDKRGAK LMLSNSYNVDFFGKLYEGFNIKKVVAKRMINCKGDKRKDGIYELLIMNY
Sequences:
>Translated_289_residues MEVKPFLKWAGGKTQILSQIEENLPKELKEGNIKKYIEPFVGGGAVLFYLLQKYEFKKVIISDINEDLMLCYKVVKNDVD RLIEELSSLRDEFLSLDEEKRKEFYYKVRDDFNKNKNDCDEVKRVAQFIFLNKTCYNGLYRVNKKGEFNVPYGRYKNPKI FDEQNLKNVSKLLKNVKILCGDFEIVDEYVDAESFVYFDPPYKPLNKTSSFTSYTKYDFNDDDQIRLAKFYRKLDKRGAK LMLSNSYNVDFFGKLYEGFNIKKVVAKRMINCKGDKRKDGIYELLIMNY >Mature_289_residues MEVKPFLKWAGGKTQILSQIEENLPKELKEGNIKKYIEPFVGGGAVLFYLLQKYEFKKVIISDINEDLMLCYKVVKNDVD RLIEELSSLRDEFLSLDEEKRKEFYYKVRDDFNKNKNDCDEVKRVAQFIFLNKTCYNGLYRVNKKGEFNVPYGRYKNPKI FDEQNLKNVSKLLKNVKILCGDFEIVDEYVDAESFVYFDPPYKPLNKTSSFTSYTKYDFNDDDQIRLAKFYRKLDKRGAK LMLSNSYNVDFFGKLYEGFNIKKVVAKRMINCKGDKRKDGIYELLIMNY
Specific function: This methylase recognizes the double-stranded sequence GATC, causes specific methylation on A-2 on both strands, and protects the DNA from cleavage by the MjaIII endonuclease (Potential)
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family
Homologues:
Organism=Escherichia coli, GI1789789, Length=284, Percent_Identity=35.5633802816901, Blast_Score=160, Evalue=1e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTM3_METJA (Q58015)
Other databases:
- EMBL: L77117 - PIR: F64374 - RefSeq: NP_247580.1 - ProteinModelPortal: Q58015 - SMR: Q58015 - REBASE: 3890 - GeneID: 1451463 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0598 - NMPDR: fig|243232.1.peg.617 - TIGR: MJ0598 - HOGENOM: HBG586381 - OMA: KARRTIS - ProtClustDB: CLSK2517633 - BioCyc: MJAN243232:MJ_0598-MONOMER - BRENDA: 2.1.1.72 - InterPro: IPR023095 - InterPro: IPR002052 - InterPro: IPR012327 - Gene3D: G3DSA:1.10.1020.10 - PRINTS: PR00505 - TIGRFAMs: TIGR00571
Pfam domain/function: PF02086 MethyltransfD12
EC number: =2.1.1.72
Molecular weight: Translated: 34235; Mature: 34235
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: PS00092 N6_MTASE
Important sites: BINDING 9-9 BINDING 13-13 BINDING 63-63 BINDING 199-199
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVKPFLKWAGGKTQILSQIEENLPKELKEGNIKKYIEPFVGGGAVLFYLLQKYEFKKVI CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH ISDINEDLMLCYKVVKNDVDRLIEELSSLRDEFLSLDEEKRKEFYYKVRDDFNKNKNDCD HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHH EVKRVAQFIFLNKTCYNGLYRVNKKGEFNVPYGRYKNPKIFDEQNLKNVSKLLKNVKILC HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GDFEIVDEYVDAESFVYFDPPYKPLNKTSSFTSYTKYDFNDDDQIRLAKFYRKLDKRGAK CHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCE LMLSNSYNVDFFGKLYEGFNIKKVVAKRMINCKGDKRKDGIYELLIMNY EEEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHEEEECC >Mature Secondary Structure MEVKPFLKWAGGKTQILSQIEENLPKELKEGNIKKYIEPFVGGGAVLFYLLQKYEFKKVI CCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHH ISDINEDLMLCYKVVKNDVDRLIEELSSLRDEFLSLDEEKRKEFYYKVRDDFNKNKNDCD HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHH EVKRVAQFIFLNKTCYNGLYRVNKKGEFNVPYGRYKNPKIFDEQNLKNVSKLLKNVKILC HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH GDFEIVDEYVDAESFVYFDPPYKPLNKTSSFTSYTKYDFNDDDQIRLAKFYRKLDKRGAK CHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCCE LMLSNSYNVDFFGKLYEGFNIKKVVAKRMINCKGDKRKDGIYELLIMNY EEEECCCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087