Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is yraQ [C]

Identifier: 15668764

GI number: 15668764

Start: 516562

End: 517659

Strand: Direct

Name: yraQ [C]

Synonym: MJ0584

Alternate gene names: 15668764

Gene position: 516562-517659 (Clockwise)

Preceding gene: 15668763

Following gene: 15668765

Centisome position: 31.03

GC content: 36.52

Gene sequence:

>1098_bases
ATGAAAATGGATGTTATGAGCTTTATAATGAACATTATTAATGTTATGATAAACACAATCATCGATTATTTAAATGTAAA
TAGAGTCTTAGCCTTATTGATGGCTTTCTTAATGGCTGGAGGCATTGCTTCAATGATTAACAAGAACTTTATTATAAAAT
ATTTCGGTTCAAACACACCAAAATACATATCCTATACTGTAGCTGCTGTTAGTGGTAGCTTATTAGCTGTCTGTTCTTGC
ACTATCCTTCCATTATTTGCCAGTATTTACAAAAGAGGAGCTGGAATAGGGCCAGCAACAACATTCTTGTTCTCTGGGCC
AGCAATAAATGTTTTGGCTATATTTTACTCAGCGGCATTGCTTGGATGGGACATTGGATTTTTAAGGGCTGTGTTTGCAG
TAGTAGTCTCAATACTTATTGGTTTATCAATGGAGATAATATTTAAAAGCCATGAGAAAAAGAGAGCTTTAAGAGTCCCA
AAGGCAGATAAAATATCAGATAGGCCTCTATATCAAACAATAACATTCTTTGCTCTGCAGTTTATCATGTTGTTGGTAAT
TACCGCCTCACCCAAGCTGTTTCCAACGTTATCAATGCCTCTATACGATGGATTTTTATTAAAGCATCTGCTATTTATAA
TACTTGGGATTATCTTGGCTGTAACAACAAAAATCTGGTTTAAAGATGAGGAGATTAAGAACTGGCTCAGAGAGAGCTTT
ACACTGCTAAAGATTGTCTTTCCACTGCTAATTATTGGAGTTGCCATAGCTGGAGCTATTAAGGCAATTATCCCACCAAG
TTATATAGCAACCTATGTAGGAGGAAACTCCATAACTGCCAACTTTATTGCCTCATTTATTGGAGCTTTGATGTATTTCG
CCACATTAACAGAAGTGCCAATTATAAAGGCATTGATGGAGCTTGGTATGGGTGTAGGGCCGGCAATGGCTCTGCTGTTA
GCTGGACCAAGTTTGAGTATTCCAACAGTCTTAACCATCTCAAAAGTCTTAGGAAAGACGAAGGCTTTAACATATTTGGG
TTTAGTTGTTATATTCTCAACAATATGTGGCTATATAGCTGGAATAATCCTCAGATAA

Upstream 100 bases:

>100_bases
GCATGGCTTCTGAGGTAGAGCTTCCAAACTGCCCAGATTGTGGAGAAAAGATGGTTCATGATTATACTTCATTAAAAGGA
AGAAGGAGAATTAGGAGGGG

Downstream 100 bases:

>100_bases
GATAATATTTGGTGAAGAAATGAAAAAATTAGCTTTTTTAATACTTTTAATTGTATTTTCTAATTTATCATTAGTAAATG
CTATAGATGACAATATCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MKMDVMSFIMNIINVMINTIIDYLNVNRVLALLMAFLMAGGIASMINKNFIIKYFGSNTPKYISYTVAAVSGSLLAVCSC
TILPLFASIYKRGAGIGPATTFLFSGPAINVLAIFYSAALLGWDIGFLRAVFAVVVSILIGLSMEIIFKSHEKKRALRVP
KADKISDRPLYQTITFFALQFIMLLVITASPKLFPTLSMPLYDGFLLKHLLFIILGIILAVTTKIWFKDEEIKNWLRESF
TLLKIVFPLLIIGVAIAGAIKAIIPPSYIATYVGGNSITANFIASFIGALMYFATLTEVPIIKALMELGMGVGPAMALLL
AGPSLSIPTVLTISKVLGKTKALTYLGLVVIFSTICGYIAGIILR

Sequences:

>Translated_365_residues
MKMDVMSFIMNIINVMINTIIDYLNVNRVLALLMAFLMAGGIASMINKNFIIKYFGSNTPKYISYTVAAVSGSLLAVCSC
TILPLFASIYKRGAGIGPATTFLFSGPAINVLAIFYSAALLGWDIGFLRAVFAVVVSILIGLSMEIIFKSHEKKRALRVP
KADKISDRPLYQTITFFALQFIMLLVITASPKLFPTLSMPLYDGFLLKHLLFIILGIILAVTTKIWFKDEEIKNWLRESF
TLLKIVFPLLIIGVAIAGAIKAIIPPSYIATYVGGNSITANFIASFIGALMYFATLTEVPIIKALMELGMGVGPAMALLL
AGPSLSIPTVLTISKVLGKTKALTYLGLVVIFSTICGYIAGIILR
>Mature_365_residues
MKMDVMSFIMNIINVMINTIIDYLNVNRVLALLMAFLMAGGIASMINKNFIIKYFGSNTPKYISYTVAAVSGSLLAVCSC
TILPLFASIYKRGAGIGPATTFLFSGPAINVLAIFYSAALLGWDIGFLRAVFAVVVSILIGLSMEIIFKSHEKKRALRVP
KADKISDRPLYQTITFFALQFIMLLVITASPKLFPTLSMPLYDGFLLKHLLFIILGIILAVTTKIWFKDEEIKNWLRESF
TLLKIVFPLLIIGVAIAGAIKAIIPPSYIATYVGGNSITANFIASFIGALMYFATLTEVPIIKALMELGMGVGPAMALLL
AGPSLSIPTVLTISKVLGKTKALTYLGLVVIFSTICGYIAGIILR

Specific function: Unknown

COG id: COG0701

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0718 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y584_METJA (Q58004)

Other databases:

- EMBL:   L77117
- PIR:   H64372
- RefSeq:   NP_247563.1
- ProteinModelPortal:   Q58004
- GeneID:   1451449
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0584
- NMPDR:   fig|243232.1.peg.600
- TIGR:   MJ0584
- HOGENOM:   HBG449339
- OMA:   TCLVPAF
- ProtClustDB:   CLSK796479
- BioCyc:   MJAN243232:MJ_0584-MONOMER
- InterPro:   IPR005524

Pfam domain/function: PF03773 DUF318

EC number: NA

Molecular weight: Translated: 39664; Mature: 39664

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xc3277fc)-; HASH(0xcd23cc4)-; HASH(0xaf8c0a8)-; HASH(0xc8aac1c)-; HASH(0xcd4a334)-; HASH(0xd184b0c)-; HASH(0xd01fb58)-; HASH(0xcddeaa0)-; HASH(0xca7db5c)-; HASH(0xb2db76c)-; HASH(0xd1971d8)-;

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMDVMSFIMNIINVMINTIIDYLNVNRVLALLMAFLMAGGIASMINKNFIIKYFGSNTP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCC
KYISYTVAAVSGSLLAVCSCTILPLFASIYKRGAGIGPATTFLFSGPAINVLAIFYSAAL
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
LGWDIGFLRAVFAVVVSILIGLSMEIIFKSHEKKRALRVPKADKISDRPLYQTITFFALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
FIMLLVITASPKLFPTLSMPLYDGFLLKHLLFIILGIILAVTTKIWFKDEEIKNWLRESF
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TLLKIVFPLLIIGVAIAGAIKAIIPPSYIATYVGGNSITANFIASFIGALMYFATLTEVP
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
IIKALMELGMGVGPAMALLLAGPSLSIPTVLTISKVLGKTKALTYLGLVVIFSTICGYIA
HHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIILR
HHHCH
>Mature Secondary Structure
MKMDVMSFIMNIINVMINTIIDYLNVNRVLALLMAFLMAGGIASMINKNFIIKYFGSNTP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCC
KYISYTVAAVSGSLLAVCSCTILPLFASIYKRGAGIGPATTFLFSGPAINVLAIFYSAAL
HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHH
LGWDIGFLRAVFAVVVSILIGLSMEIIFKSHEKKRALRVPKADKISDRPLYQTITFFALQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
FIMLLVITASPKLFPTLSMPLYDGFLLKHLLFIILGIILAVTTKIWFKDEEIKNWLRESF
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
TLLKIVFPLLIIGVAIAGAIKAIIPPSYIATYVGGNSITANFIASFIGALMYFATLTEVP
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
IIKALMELGMGVGPAMALLLAGPSLSIPTVLTISKVLGKTKALTYLGLVVIFSTICGYIA
HHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GIILR
HHHCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087