Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is yraQ [C]
Identifier: 15668764
GI number: 15668764
Start: 516562
End: 517659
Strand: Direct
Name: yraQ [C]
Synonym: MJ0584
Alternate gene names: 15668764
Gene position: 516562-517659 (Clockwise)
Preceding gene: 15668763
Following gene: 15668765
Centisome position: 31.03
GC content: 36.52
Gene sequence:
>1098_bases ATGAAAATGGATGTTATGAGCTTTATAATGAACATTATTAATGTTATGATAAACACAATCATCGATTATTTAAATGTAAA TAGAGTCTTAGCCTTATTGATGGCTTTCTTAATGGCTGGAGGCATTGCTTCAATGATTAACAAGAACTTTATTATAAAAT ATTTCGGTTCAAACACACCAAAATACATATCCTATACTGTAGCTGCTGTTAGTGGTAGCTTATTAGCTGTCTGTTCTTGC ACTATCCTTCCATTATTTGCCAGTATTTACAAAAGAGGAGCTGGAATAGGGCCAGCAACAACATTCTTGTTCTCTGGGCC AGCAATAAATGTTTTGGCTATATTTTACTCAGCGGCATTGCTTGGATGGGACATTGGATTTTTAAGGGCTGTGTTTGCAG TAGTAGTCTCAATACTTATTGGTTTATCAATGGAGATAATATTTAAAAGCCATGAGAAAAAGAGAGCTTTAAGAGTCCCA AAGGCAGATAAAATATCAGATAGGCCTCTATATCAAACAATAACATTCTTTGCTCTGCAGTTTATCATGTTGTTGGTAAT TACCGCCTCACCCAAGCTGTTTCCAACGTTATCAATGCCTCTATACGATGGATTTTTATTAAAGCATCTGCTATTTATAA TACTTGGGATTATCTTGGCTGTAACAACAAAAATCTGGTTTAAAGATGAGGAGATTAAGAACTGGCTCAGAGAGAGCTTT ACACTGCTAAAGATTGTCTTTCCACTGCTAATTATTGGAGTTGCCATAGCTGGAGCTATTAAGGCAATTATCCCACCAAG TTATATAGCAACCTATGTAGGAGGAAACTCCATAACTGCCAACTTTATTGCCTCATTTATTGGAGCTTTGATGTATTTCG CCACATTAACAGAAGTGCCAATTATAAAGGCATTGATGGAGCTTGGTATGGGTGTAGGGCCGGCAATGGCTCTGCTGTTA GCTGGACCAAGTTTGAGTATTCCAACAGTCTTAACCATCTCAAAAGTCTTAGGAAAGACGAAGGCTTTAACATATTTGGG TTTAGTTGTTATATTCTCAACAATATGTGGCTATATAGCTGGAATAATCCTCAGATAA
Upstream 100 bases:
>100_bases GCATGGCTTCTGAGGTAGAGCTTCCAAACTGCCCAGATTGTGGAGAAAAGATGGTTCATGATTATACTTCATTAAAAGGA AGAAGGAGAATTAGGAGGGG
Downstream 100 bases:
>100_bases GATAATATTTGGTGAAGAAATGAAAAAATTAGCTTTTTTAATACTTTTAATTGTATTTTCTAATTTATCATTAGTAAATG CTATAGATGACAATATCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 365; Mature: 365
Protein sequence:
>365_residues MKMDVMSFIMNIINVMINTIIDYLNVNRVLALLMAFLMAGGIASMINKNFIIKYFGSNTPKYISYTVAAVSGSLLAVCSC TILPLFASIYKRGAGIGPATTFLFSGPAINVLAIFYSAALLGWDIGFLRAVFAVVVSILIGLSMEIIFKSHEKKRALRVP KADKISDRPLYQTITFFALQFIMLLVITASPKLFPTLSMPLYDGFLLKHLLFIILGIILAVTTKIWFKDEEIKNWLRESF TLLKIVFPLLIIGVAIAGAIKAIIPPSYIATYVGGNSITANFIASFIGALMYFATLTEVPIIKALMELGMGVGPAMALLL AGPSLSIPTVLTISKVLGKTKALTYLGLVVIFSTICGYIAGIILR
Sequences:
>Translated_365_residues MKMDVMSFIMNIINVMINTIIDYLNVNRVLALLMAFLMAGGIASMINKNFIIKYFGSNTPKYISYTVAAVSGSLLAVCSC TILPLFASIYKRGAGIGPATTFLFSGPAINVLAIFYSAALLGWDIGFLRAVFAVVVSILIGLSMEIIFKSHEKKRALRVP KADKISDRPLYQTITFFALQFIMLLVITASPKLFPTLSMPLYDGFLLKHLLFIILGIILAVTTKIWFKDEEIKNWLRESF TLLKIVFPLLIIGVAIAGAIKAIIPPSYIATYVGGNSITANFIASFIGALMYFATLTEVPIIKALMELGMGVGPAMALLL AGPSLSIPTVLTISKVLGKTKALTYLGLVVIFSTICGYIAGIILR >Mature_365_residues MKMDVMSFIMNIINVMINTIIDYLNVNRVLALLMAFLMAGGIASMINKNFIIKYFGSNTPKYISYTVAAVSGSLLAVCSC TILPLFASIYKRGAGIGPATTFLFSGPAINVLAIFYSAALLGWDIGFLRAVFAVVVSILIGLSMEIIFKSHEKKRALRVP KADKISDRPLYQTITFFALQFIMLLVITASPKLFPTLSMPLYDGFLLKHLLFIILGIILAVTTKIWFKDEEIKNWLRESF TLLKIVFPLLIIGVAIAGAIKAIIPPSYIATYVGGNSITANFIASFIGALMYFATLTEVPIIKALMELGMGVGPAMALLL AGPSLSIPTVLTISKVLGKTKALTYLGLVVIFSTICGYIAGIILR
Specific function: Unknown
COG id: COG0701
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0718 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y584_METJA (Q58004)
Other databases:
- EMBL: L77117 - PIR: H64372 - RefSeq: NP_247563.1 - ProteinModelPortal: Q58004 - GeneID: 1451449 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0584 - NMPDR: fig|243232.1.peg.600 - TIGR: MJ0584 - HOGENOM: HBG449339 - OMA: TCLVPAF - ProtClustDB: CLSK796479 - BioCyc: MJAN243232:MJ_0584-MONOMER - InterPro: IPR005524
Pfam domain/function: PF03773 DUF318
EC number: NA
Molecular weight: Translated: 39664; Mature: 39664
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc3277fc)-; HASH(0xcd23cc4)-; HASH(0xaf8c0a8)-; HASH(0xc8aac1c)-; HASH(0xcd4a334)-; HASH(0xd184b0c)-; HASH(0xd01fb58)-; HASH(0xcddeaa0)-; HASH(0xca7db5c)-; HASH(0xb2db76c)-; HASH(0xd1971d8)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMDVMSFIMNIINVMINTIIDYLNVNRVLALLMAFLMAGGIASMINKNFIIKYFGSNTP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCC KYISYTVAAVSGSLLAVCSCTILPLFASIYKRGAGIGPATTFLFSGPAINVLAIFYSAAL HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHH LGWDIGFLRAVFAVVVSILIGLSMEIIFKSHEKKRALRVPKADKISDRPLYQTITFFALQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH FIMLLVITASPKLFPTLSMPLYDGFLLKHLLFIILGIILAVTTKIWFKDEEIKNWLRESF HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TLLKIVFPLLIIGVAIAGAIKAIIPPSYIATYVGGNSITANFIASFIGALMYFATLTEVP HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH IIKALMELGMGVGPAMALLLAGPSLSIPTVLTISKVLGKTKALTYLGLVVIFSTICGYIA HHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIILR HHHCH >Mature Secondary Structure MKMDVMSFIMNIINVMINTIIDYLNVNRVLALLMAFLMAGGIASMINKNFIIKYFGSNTP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEECCCCCC KYISYTVAAVSGSLLAVCSCTILPLFASIYKRGAGIGPATTFLFSGPAINVLAIFYSAAL HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHH LGWDIGFLRAVFAVVVSILIGLSMEIIFKSHEKKRALRVPKADKISDRPLYQTITFFALQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH FIMLLVITASPKLFPTLSMPLYDGFLLKHLLFIILGIILAVTTKIWFKDEEIKNWLRESF HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH TLLKIVFPLLIIGVAIAGAIKAIIPPSYIATYVGGNSITANFIASFIGALMYFATLTEVP HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH IIKALMELGMGVGPAMALLLAGPSLSIPTVLTISKVLGKTKALTYLGLVVIFSTICGYIA HHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIILR HHHCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087