Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15668743

Identifier: 15668743

GI number: 15668743

Start: 497048

End: 497980

Strand: Reverse

Name: 15668743

Synonym: MJ0563

Alternate gene names: NA

Gene position: 497980-497048 (Counterclockwise)

Preceding gene: 15668744

Following gene: 15668742

Centisome position: 29.91

GC content: 29.8

Gene sequence:

>933_bases
ATGAATGTTATTGATTTATTCTCTGGATGTGGAGGTTTTTCAAAAGGTTTTTTAGATGAAAACTTCAGAATTTTGGGAGC
TATAGAGAACTTTAAGCCAGTTGTTAAAACTTATTTATACAATATAAAAGCCCCTGTCTGGATGGATGATATAAAGAGGA
TTCCTCCGAAAGCGTTTGATGAATTTATAAAAAATGAGAAAGTTGATGTAATTATCGGCTCTCCTCCATGTGAGCCATTT
ACAAAGGCAAATAAATTAATTAAAGACAATCCATTAGATAGATTATATAAAGACAAAGTTGGTAGGTTAGTTTTGTATTA
TATAGATTATGTCAATTACTTTACACAAAGAAATGATGATTTAATATTTGTTATGGAAAATGTTCCACAAATTAAAGAAA
TTAAGGATGAACTAAAAAAGTTGTTTGGAGATATAGGGCATAAGGTTTATTTTAATATATTAAGAGCAGAGGATTATGGA
AATCCATCAAAAAGAGCGAGAATGTTTATTTCAAATATAAAATTAAAGCCAAAGAAAGTTGATAAACTTGTTGTTGTAGA
AGAAGCTTTAAAAGACATTCCAAAAGACGCAAAAAATCATGAAATTAAAAAGTTATCTAAAGAAAAAGTAGAGATGATTT
CAAAATTAAAGTGGGGTGAGGCATTATATAGATATAGAGGAAAGAAAAAGTTAATGTTTAATTGGTATAAGTTGCATCCT
AAAAAATTAGCTCCAACTGTTAAAGGAAGGAGCAGGTTTATCCACCCTTATGAAGATAGGTTATTAACTGTAAGAGAACA
GGCAAGATTGATGAGTTATCCTGATGATTTTGTATTCTTTGGAGGAAGAGATGTTCAGTATAATCAAATTGGAGAAAGTG
TTCCTCCGATACTGGGTAGGGCTATAGCTAAAGAAATCAAAAAACAGTTATAA

Upstream 100 bases:

>100_bases
ACTTAATGGAACGAGTTTTGATGAAACCGAAGCGTTAGCTTCGGGCTACAAAAACTCGAAGAGTTTTTGTTCAACTTTTA
CTAAAAGTTTCGGTGAGAAT

Downstream 100 bases:

>100_bases
TTTTGATGAACCTTTTACTAAAAGGTTTGAATAAGCAGTCCATTAAAACAAGAAAGGAAATCCTATTGAAAAAACTAAAT
AATAAGCTACAAATATGGTT

Product: type II R/M system modification methyltransferase

Products: NA

Alternate protein names: Cytosine-specific methyltransferase MJ0563; M.MjaVIIIP

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MNVIDLFSGCGGFSKGFLDENFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPPKAFDEFIKNEKVDVIIGSPPCEPF
TKANKLIKDNPLDRLYKDKVGRLVLYYIDYVNYFTQRNDDLIFVMENVPQIKEIKDELKKLFGDIGHKVYFNILRAEDYG
NPSKRARMFISNIKLKPKKVDKLVVVEEALKDIPKDAKNHEIKKLSKEKVEMISKLKWGEALYRYRGKKKLMFNWYKLHP
KKLAPTVKGRSRFIHPYEDRLLTVREQARLMSYPDDFVFFGGRDVQYNQIGESVPPILGRAIAKEIKKQL

Sequences:

>Translated_310_residues
MNVIDLFSGCGGFSKGFLDENFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPPKAFDEFIKNEKVDVIIGSPPCEPF
TKANKLIKDNPLDRLYKDKVGRLVLYYIDYVNYFTQRNDDLIFVMENVPQIKEIKDELKKLFGDIGHKVYFNILRAEDYG
NPSKRARMFISNIKLKPKKVDKLVVVEEALKDIPKDAKNHEIKKLSKEKVEMISKLKWGEALYRYRGKKKLMFNWYKLHP
KKLAPTVKGRSRFIHPYEDRLLTVREQARLMSYPDDFVFFGGRDVQYNQIGESVPPILGRAIAKEIKKQL
>Mature_310_residues
MNVIDLFSGCGGFSKGFLDENFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPPKAFDEFIKNEKVDVIIGSPPCEPF
TKANKLIKDNPLDRLYKDKVGRLVLYYIDYVNYFTQRNDDLIFVMENVPQIKEIKDELKKLFGDIGHKVYFNILRAEDYG
NPSKRARMFISNIKLKPKKVDKLVVVEEALKDIPKDAKNHEIKKLSKEKVEMISKLKWGEALYRYRGKKKLMFNWYKLHP
KKLAPTVKGRSRFIHPYEDRLLTVREQARLMSYPDDFVFFGGRDVQYNQIGESVPPILGRAIAKEIKKQL

Specific function: Unknown

COG id: COG0270

COG function: function code L; Site-specific DNA methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the C5-methyltransferase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MT51_METJA (Q57983)

Other databases:

- EMBL:   L77117
- PIR:   C64370
- RefSeq:   NP_247542.1
- ProteinModelPortal:   Q57983
- REBASE:   3888
- GeneID:   1451428
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_0563
- NMPDR:   fig|243232.1.peg.579
- TIGR:   MJ0563
- HOGENOM:   HBG682358
- OMA:   RARMFIS
- ProtClustDB:   CLSK2749894
- BioCyc:   MJAN243232:MJ_0563-MONOMER
- BRENDA:   2.1.1.37
- InterPro:   IPR001525
- PANTHER:   PTHR10629
- PRINTS:   PR00105
- TIGRFAMs:   TIGR00675

Pfam domain/function: PF00145 DNA_methylase

EC number: =2.1.1.37

Molecular weight: Translated: 36290; Mature: 36290

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS00094 C5_MTASE_1; PS00095 C5_MTASE_2

Important sites: ACT_SITE 77-77

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVIDLFSGCGGFSKGFLDENFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPPKAFD
CCHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHH
EFIKNEKVDVIIGSPPCEPFTKANKLIKDNPLDRLYKDKVGRLVLYYIDYVNYFTQRNDD
HHHCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LIFVMENVPQIKEIKDELKKLFGDIGHKVYFNILRAEDYGNPSKRARMFISNIKLKPKKV
EEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH
DKLVVVEEALKDIPKDAKNHEIKKLSKEKVEMISKLKWGEALYRYRGKKKLMFNWYKLHP
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCH
KKLAPTVKGRSRFIHPYEDRLLTVREQARLMSYPDDFVFFGGRDVQYNQIGESVPPILGR
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCHHHHHH
AIAKEIKKQL
HHHHHHHHCC
>Mature Secondary Structure
MNVIDLFSGCGGFSKGFLDENFRILGAIENFKPVVKTYLYNIKAPVWMDDIKRIPPKAFD
CCHHHHHHCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCHHHHHCCCHHHHH
EFIKNEKVDVIIGSPPCEPFTKANKLIKDNPLDRLYKDKVGRLVLYYIDYVNYFTQRNDD
HHHCCCCEEEEECCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
LIFVMENVPQIKEIKDELKKLFGDIGHKVYFNILRAEDYGNPSKRARMFISNIKLKPKKV
EEEEECCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHH
DKLVVVEEALKDIPKDAKNHEIKKLSKEKVEMISKLKWGEALYRYRGKKKLMFNWYKLHP
HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHCH
KKLAPTVKGRSRFIHPYEDRLLTVREQARLMSYPDDFVFFGGRDVQYNQIGESVPPILGR
HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCHHHHHH
AIAKEIKKQL
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087