Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is 15668740
Identifier: 15668740
GI number: 15668740
Start: 494887
End: 495303
Strand: Reverse
Name: 15668740
Synonym: MJ0560
Alternate gene names: NA
Gene position: 495303-494887 (Counterclockwise)
Preceding gene: 15668742
Following gene: 15668738
Centisome position: 29.75
GC content: 28.78
Gene sequence:
>417_bases GTGATGATAATGAAATTTGTTAGATTAGAATTTATATCTTATGAGGAGTCATATGATTTTGAATTTATGGCTCCGGATGA CATCACTGAAGATAAGTTTATAGATGACTTGTCAGATGCTATAGTGAAAAGCATAAATTGGGAGTATATAAAGGGATACT TTCAAGAAGAAGATGAATTAGGTATGGAAATTCTCCCTAATTTAATAGACTGCATTGATTTTAAAAATGTGAATGTAGAA ATGGAAAAGAAAGGGTATAAACCCATAAAATATGACATCATTGTGTATGCAGGGGCATGGTCATATTTTAATCCAAAAAA GTTAAGTATTATCGACTTTCATGAAACAGGAGAATTGACAAAATTAGAAAAAGCAATTCAAGAGAAATTAAAAAGATTAA AGACAGATATTTATTAA
Upstream 100 bases:
>100_bases AGATTTTATTAGTTTTGAAAAGAACCATATAATTTCACAAAATGATAAATAATTTAAACCTTCAAATAATAAACCATAAC AACCCCCCAGTGAAAATGAA
Downstream 100 bases:
>100_bases ATTATGTTTCAAACTACATCTCACAAAGAATCTTCCCATATTTTTCCTTAAATTCATCTAAATTCTTGATAGTTGTATCT AAAGTTAGAGGAGTTATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MMIMKFVRLEFISYEESYDFEFMAPDDITEDKFIDDLSDAIVKSINWEYIKGYFQEEDELGMEILPNLIDCIDFKNVNVE MEKKGYKPIKYDIIVYAGAWSYFNPKKLSIIDFHETGELTKLEKAIQEKLKRLKTDIY
Sequences:
>Translated_138_residues MMIMKFVRLEFISYEESYDFEFMAPDDITEDKFIDDLSDAIVKSINWEYIKGYFQEEDELGMEILPNLIDCIDFKNVNVE MEKKGYKPIKYDIIVYAGAWSYFNPKKLSIIDFHETGELTKLEKAIQEKLKRLKTDIY >Mature_138_residues MMIMKFVRLEFISYEESYDFEFMAPDDITEDKFIDDLSDAIVKSINWEYIKGYFQEEDELGMEILPNLIDCIDFKNVNVE MEKKGYKPIKYDIIVYAGAWSYFNPKKLSIIDFHETGELTKLEKAIQEKLKRLKTDIY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y560_METJA (Q57980)
Other databases:
- EMBL: L77117 - PIR: H64369 - RefSeq: NP_247539.1 - GeneID: 1451425 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0560 - NMPDR: fig|243232.1.peg.576 - TIGR: MJ0560 - ProtClustDB: CLSK2749893 - BioCyc: MJAN243232:MJ_0560-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16470; Mature: 16470
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIMKFVRLEFISYEESYDFEFMAPDDITEDKFIDDLSDAIVKSINWEYIKGYFQEEDEL CHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC GMEILPNLIDCIDFKNVNVEMEKKGYKPIKYDIIVYAGAWSYFNPKKLSIIDFHETGELT CHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCHH KLEKAIQEKLKRLKTDIY HHHHHHHHHHHHHHHCCC >Mature Secondary Structure MMIMKFVRLEFISYEESYDFEFMAPDDITEDKFIDDLSDAIVKSINWEYIKGYFQEEDEL CHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCC GMEILPNLIDCIDFKNVNVEMEKKGYKPIKYDIIVYAGAWSYFNPKKLSIIDFHETGELT CHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEEEECCCCCCCCCEEEEEEECCCCCHH KLEKAIQEKLKRLKTDIY HHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087