Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
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Accession | NC_000909 |
Length | 1,664,970 |
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The map label for this gene is frvX [C]
Identifier: 15668735
GI number: 15668735
Start: 490782
End: 491834
Strand: Direct
Name: frvX [C]
Synonym: MJ0555
Alternate gene names: 15668735
Gene position: 490782-491834 (Clockwise)
Preceding gene: 15668729
Following gene: 15668739
Centisome position: 29.48
GC content: 35.52
Gene sequence:
>1053_bases ATGTCAGTTGTTGAATACTTAAAAAAGCTCTCAAAACTACATGGAATATCTGGGAGGGAGGATAGTGTTAGAGAGTTTAT GAAAAAAGAGTTGGAAAAATACTGTGATTCCGTTGAAATTGATAACTTTGGGAATTTAATAGCAAAGAGAGGGAATAAAG GAAAGAAGATTATGATAGCAGCTCACATGGATGAGATTGGTTTGATGGTTAAATATATTGACGATAATGGTTTCTTAAAA TTCACAAAGATTGGAGGCATTTATGACCCAACAATATTAAACCAAAAGGTTGTTGTTCATGGAAGTAAAGGGGATTTAAT TGGTGTTTTAGGCTCAAAACCTCCACACAGAATGAAAGAAGAAGAAAAAACCAAAATAATTAAATATGAAGATATGTTTA TAGACATTGGAGCTGAGAGTAGGGAAGAGGCTATAGAAATGGGGGTTAATATAGGAACATGGGTTTCTTTTTTAAGTGAG GTTTATGATTTAGGTAAAAATAGATTAACTGGAAAGGCATTTGATGATAGGGTGGGATGTGCTGTTCTCTTAGAAGTTAT GAAAAGGTTATCTGAAGAAGATATTGACTGTCAGGTCTATGCAGTGGGAACTGTCCAAGAGGAAGTTGGATTAAAAGGGG CAAGAGTCTCTGCCTTTAAAATAAATCCAGATGTTGCCATTGCGTTAGATGTTACTATAGCAGGAGACCATCCAGGAATT AAAAAAGAAGATGCTCCGGTAGATTTAGGTAAGGGGCCAGTGGTTGGAATAGTAGATGCATCTGGTAGAGGGTTGATAGC TCATCCAAAAGTCTTAGATATGATTAAAGCTGTTTCTGAAAAGTATAAAATAGATGTTCAGTGGGAAGTTGGTGAGGGAG GAACTACAGATGCAACAGCCATTCATTTAACAAGAGAGGGAATTCCAACTGGTGTTATCTCTGTTCCAGCAAGATATATA CATACTCCAGTTGAAGTTATTGATAAGAGAGATTTAGAAAAAACTGTGGAATTGGTTTATAATTGCATAAAAGAGGTCAA TAATTTCTTCTAA
Upstream 100 bases:
>100_bases AAAATTGACGAAAGGAAATTGGACACTTACCATTAAAACATAAATCTAAAATAGTTGGATTAGGAATACATTAACTACTA TTTAAAAAAGGTGAGAGATT
Downstream 100 bases:
>100_bases AAGTATTTTTAATTATTCTAAGTTCTTTTTTTAGCTTTAATATTTTATCTTAATCTCAGTATTGTGATTGTAGAAACTTA CAAGAGTTTTTAACTCTTTT
Product: endoglucanase CelM
Products: D-glucose; GDP
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSVVEYLKKLSKLHGISGREDSVREFMKKELEKYCDSVEIDNFGNLIAKRGNKGKKIMIAAHMDEIGLMVKYIDDNGFLK FTKIGGIYDPTILNQKVVVHGSKGDLIGVLGSKPPHRMKEEEKTKIIKYEDMFIDIGAESREEAIEMGVNIGTWVSFLSE VYDLGKNRLTGKAFDDRVGCAVLLEVMKRLSEEDIDCQVYAVGTVQEEVGLKGARVSAFKINPDVAIALDVTIAGDHPGI KKEDAPVDLGKGPVVGIVDASGRGLIAHPKVLDMIKAVSEKYKIDVQWEVGEGGTTDATAIHLTREGIPTGVISVPARYI HTPVEVIDKRDLEKTVELVYNCIKEVNNFF
Sequences:
>Translated_350_residues MSVVEYLKKLSKLHGISGREDSVREFMKKELEKYCDSVEIDNFGNLIAKRGNKGKKIMIAAHMDEIGLMVKYIDDNGFLK FTKIGGIYDPTILNQKVVVHGSKGDLIGVLGSKPPHRMKEEEKTKIIKYEDMFIDIGAESREEAIEMGVNIGTWVSFLSE VYDLGKNRLTGKAFDDRVGCAVLLEVMKRLSEEDIDCQVYAVGTVQEEVGLKGARVSAFKINPDVAIALDVTIAGDHPGI KKEDAPVDLGKGPVVGIVDASGRGLIAHPKVLDMIKAVSEKYKIDVQWEVGEGGTTDATAIHLTREGIPTGVISVPARYI HTPVEVIDKRDLEKTVELVYNCIKEVNNFF >Mature_349_residues SVVEYLKKLSKLHGISGREDSVREFMKKELEKYCDSVEIDNFGNLIAKRGNKGKKIMIAAHMDEIGLMVKYIDDNGFLKF TKIGGIYDPTILNQKVVVHGSKGDLIGVLGSKPPHRMKEEEKTKIIKYEDMFIDIGAESREEAIEMGVNIGTWVSFLSEV YDLGKNRLTGKAFDDRVGCAVLLEVMKRLSEEDIDCQVYAVGTVQEEVGLKGARVSAFKINPDVAIALDVTIAGDHPGIK KEDAPVDLGKGPVVGIVDASGRGLIAHPKVLDMIKAVSEKYKIDVQWEVGEGGTTDATAIHLTREGIPTGVISVPARYIH TPVEVIDKRDLEKTVELVYNCIKEVNNFF
Specific function: Unknown
COG id: COG1363
COG function: function code G; Cellulase M and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M42 family
Homologues:
Organism=Escherichia coli, GI1790332, Length=337, Percent_Identity=36.7952522255193, Blast_Score=248, Evalue=4e-67, Organism=Escherichia coli, GI87082417, Length=346, Percent_Identity=34.6820809248555, Blast_Score=217, Evalue=7e-58, Organism=Escherichia coli, GI1788727, Length=364, Percent_Identity=29.6703296703297, Blast_Score=162, Evalue=4e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y555_METJA (Q57975)
Other databases:
- EMBL: L77117 - PIR: C64369 - RefSeq: NP_247534.1 - ProteinModelPortal: Q57975 - GeneID: 1451420 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0555 - NMPDR: fig|243232.1.peg.571 - TIGR: MJ0555 - HOGENOM: HBG426188 - OMA: LEKYCDS - ProtClustDB: CLSK876246 - BioCyc: MJAN243232:MJ_0555-MONOMER - InterPro: IPR008007 - PIRSF: PIRSF001123
Pfam domain/function: PF05343 Peptidase_M42
EC number: 3.2.1.4
Molecular weight: Translated: 38622; Mature: 38491
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: ACT_SITE 207-207
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVVEYLKKLSKLHGISGREDSVREFMKKELEKYCDSVEIDNFGNLIAKRGNKGKKIMIA CCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEE AHMDEIGLMVKYIDDNGFLKFTKIGGIYDPTILNQKVVVHGSKGDLIGVLGSKPPHRMKE EECCCCCEEEEEECCCCCEEEEECCCEECCHHCCCEEEEECCCCCEEEECCCCCCHHCCH EEKTKIIKYEDMFIDIGAESREEAIEMGVNIGTWVSFLSEVYDLGKNRLTGKAFDDRVGC HHHHEEEEEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH AVLLEVMKRLSEEDIDCQVYAVGTVQEEVGLKGARVSAFKINPDVAIALDVTIAGDHPGI HHHHHHHHHHCCCCCCEEEEEEECCHHHHCCCCCEEEEEEECCCEEEEEEEEEECCCCCC KKEDAPVDLGKGPVVGIVDASGRGLIAHPKVLDMIKAVSEKYKIDVQWEVGEGGTTDATA CCCCCCCCCCCCCEEEEEECCCCCEEECHHHHHHHHHHHHHEEEEEEEECCCCCCCCCEE IHLTREGIPTGVISVPARYIHTPVEVIDKRDLEKTVELVYNCIKEVNNFF EEEECCCCCCCHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SVVEYLKKLSKLHGISGREDSVREFMKKELEKYCDSVEIDNFGNLIAKRGNKGKKIMIA CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEEEE AHMDEIGLMVKYIDDNGFLKFTKIGGIYDPTILNQKVVVHGSKGDLIGVLGSKPPHRMKE EECCCCCEEEEEECCCCCEEEEECCCEECCHHCCCEEEEECCCCCEEEECCCCCCHHCCH EEKTKIIKYEDMFIDIGAESREEAIEMGVNIGTWVSFLSEVYDLGKNRLTGKAFDDRVGC HHHHEEEEEEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH AVLLEVMKRLSEEDIDCQVYAVGTVQEEVGLKGARVSAFKINPDVAIALDVTIAGDHPGI HHHHHHHHHHCCCCCCEEEEEEECCHHHHCCCCCEEEEEEECCCEEEEEEEEEECCCCCC KKEDAPVDLGKGPVVGIVDASGRGLIAHPKVLDMIKAVSEKYKIDVQWEVGEGGTTDATA CCCCCCCCCCCCCEEEEEECCCCCEEECHHHHHHHHHHHHHEEEEEEEECCCCCCCCCEE IHLTREGIPTGVISVPARYIHTPVEVIDKRDLEKTVELVYNCIKEVNNFF EEEECCCCCCCHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GDPglucose; H2O
Specific reaction: GDP-glucose + H2O = D-glucose + GDP
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087