Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
---|---|
Accession | NC_000909 |
Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15668706
Identifier: 15668706
GI number: 15668706
Start: 464406
End: 464654
Strand: Reverse
Name: 15668706
Synonym: MJ0526.1
Alternate gene names: NA
Gene position: 464654-464406 (Counterclockwise)
Preceding gene: 15668707
Following gene: 15668705
Centisome position: 27.91
GC content: 32.13
Gene sequence:
>249_bases ATGATGGATATTGTAGAGATAATTATTGGATTTATAGCATTGTTAATGACAGCAAGGATATTCTTAGAAAGAAGTAGAGC AAGAAAATTGCTTTACCTTTGTTGTTTAAGCTTCTGTATCTCTGCATTAATTGCTCTATATGTGGATTCACCAATGGGAG GTATAGTGGCTATAACATACTTTATATGCTCAACTATCTCATCCAATGCAATTGCCTATACAATAGAGCAAACAAAACAT ATTGAATAG
Upstream 100 bases:
>100_bases TTGTGGGAATGGTCTTGGCAATATTTACAATTCAAGGATTTGAGCACAGATATGCCTCTATATTACTTGGAAAAATAGCT AAAAAGATGAATAGAGGGGA
Downstream 100 bases:
>100_bases GTGAAAATTTGGAGGTTTTACCATTAGTATCTGGAATATGTTGCATATTGGGAGGAATTGGAGTTATCTTACATACAAAT CCAATAAACAAAATTATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MMDIVEIIIGFIALLMTARIFLERSRARKLLYLCCLSFCISALIALYVDSPMGGIVAITYFICSTISSNAIAYTIEQTKH IE
Sequences:
>Translated_82_residues MMDIVEIIIGFIALLMTARIFLERSRARKLLYLCCLSFCISALIALYVDSPMGGIVAITYFICSTISSNAIAYTIEQTKH IE >Mature_82_residues MMDIVEIIIGFIALLMTARIFLERSRARKLLYLCCLSFCISALIALYVDSPMGGIVAITYFICSTISSNAIAYTIEQTKH IE
Specific function: Unknown
COG id: COG4040
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH386
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y52A_METJA (P81309)
Other databases:
- EMBL: L77117 - RefSeq: NP_247505.1 - GeneID: 1451391 - GenomeReviews: L77117_GR - KEGG: mja:MJ_0526.1 - NMPDR: fig|243232.1.peg.542 - TIGR: MJ0526.1 - HOGENOM: HBG546207 - OMA: CINFCIA - ProtClustDB: CLSK876229 - BioCyc: MJAN243232:MJ_0526.1-MONOMER - InterPro: IPR019214 - InterPro: IPR011316 - PIRSF: PIRSF036534
Pfam domain/function: PF09882 DUF2109
EC number: NA
Molecular weight: Translated: 9169; Mature: 9169
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.9 %Cys (Translated Protein) 4.9 %Met (Translated Protein) 9.8 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 9.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMDIVEIIIGFIALLMTARIFLERSRARKLLYLCCLSFCISALIALYVDSPMGGIVAITY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH FICSTISSNAIAYTIEQTKHIE HHHHHHCCCCEEEEECCCCCCC >Mature Secondary Structure MMDIVEIIIGFIALLMTARIFLERSRARKLLYLCCLSFCISALIALYVDSPMGGIVAITY CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH FICSTISSNAIAYTIEQTKHIE HHHHHHCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087