Definition Aeropyrum pernix K1, complete genome.
Accession NC_000854
Length 1,669,696

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The map label for this gene is cas3

Identifier: 14601273

GI number:

Start: 778745

End: 780457

Strand: Reverse

Name: cas3

Synonym: APE_1232

Alternate gene names: NA

Gene position: NA

Preceding gene: 118431375

Following gene: 14601272

Centisome position: NA

GC content: NA

Gene sequence:

>1713_bases
ATGGAATATGGATGCCAGCCTAACGTCCTCAAAAAGACAATCTTGAAGATGGTGAAGAGACGGATCCATGTGGAAGGTGC
TAAGAAGGCTGTTAACGAAGCTCTACTAAACAGCCAGGCTAAGGCCGCCGAGGAGATTTGCAGGATAGCATATGAAAGTC
CAGGAGGTGTTGTCTTTCTTGGGGCCCCTACTGGGGCCGGGAAAACAGAGGTGTTCATGGCACCCTTACTGGCTAGCTTT
GCCAGTAAAAGGCCTATTGCGGCCCGGGGGTTCCTTGTTGAGCCTATGCACTCCCTAATAAAAGCCATGGTTGACAGGCT
TAAGACCTCTATAGAGACTTTGGGAGTTTCTGAAGATCATGGTGAGACGGTACAGCCTACTTTCCTATATACTGCTCCCA
TCACCGTGACCACGCCGGACACGTACTTCTACGGTTTCGCCGCCTCCAGAGTCTACCGGATTCTAACGCATGAAGGTGTT
GAGACAGGCAGGTTCTCGATGCCCGTGGGTCTGCAGGCTACTAGTTATACTGTTTTCGACGAGGCCCACCTTGTGCAGGA
CGAGGTGTTCCTTAGCCCCAGGCTTCTTTCACTCGTTGTAGCTGCACTAGCCAGAGCAGGTGGATTAATCGTTGTCTCCT
CCGCCACACTACCAAGCTATTATAAAACGGTTATAAGGGAGAAGCTTGGTGATTGGCGAGTTGAAGAGGTTGAGCTAGAT
CATACTGTATTATCTCCCAAGATAGATGTAGAAGTGAAGAATAATAGTCTAGAGCCAGATGATGTAGATTGCAACGTTAA
GGGGCTTGTCCTAGTAAACACTGTCTCAAAGTCGATAAGAGTCTACAAATCACTGAAGACAAGATGCAGCAACTCGAAGG
TACTTTTGTTGCATTCGCTTTTCAAACGTAGAGACAAGAACAGCAAGATAGAGTTGCTACAAAAGCTACTTAAAGAGCAA
GATAATGGCGTTATAGCTGTAGCCACTCAAGTCCTAGAAGTTGGGGTAGACCTTGATTTCGAAGCGCTCTATACTGAGAC
GGCTCCCATAGATTCTGTCATACAGAGGCTAGGCAGGATAGGTAGGAGGCGTGGCCGTGGTTACGCAATCATTTACAACG
CCGAAACCCACCATCCATATCCCGAAAAGCTGTACTTAAAAAGCAAGGAGATAATGGATCAGCTGGCTGGAACCTACACA
CCAAGTATTAGGACCTCCTCGGATCTAGTTAATACAGTATATGAAAGAGATGTGGTAGACTCGCTAGCAAGGCTTGGAGA
CAAGCTAATGCTCCGAGCCCTCGCATACCTTGAGAGCCTCGCCCCCCTTTCATACCCGCCTAACGACGACTTGTACTTCC
GTCCTTCAGCTTTCATAGACATAGCAATACTCCCCTGTGACATTGTGGGAGACGGTAGAGAGTGGGAGCCCGAGTGGGAA
GAGCACCTAGTTAGACTATCAATACCTCTCTCTGCAAACGAGAGGACCTCGGGTTGGGACAGGCTTACTAGATTATTGAG
TAAGGCGAAGGAGGTTTACGAGGTACGGAGTGGACCTGGTGGCCGGAGGCTAATTCGAGCTTCGCAGAGACCAAAGCCTG
GTTCCACGCTCGTAGTCTGCCTTGAGAATCCAGAATATGTCTACAATGATGAAGAGGGGCTTCTAGTATCGCCACTTGTC
GGGGGAAGGCCTAGAGTGGGGGGTAAATCATGA

Upstream 100 bases:

>100_bases
GAGATAGAAGTTGAAGGCTCGGTATACGGATGCAGCGTTGAGGGGATCGACGGGAGGATTAATGTAGCTGTGCACGAGAG
CTTCCACGAGGTGTCCGGCT

Downstream 100 bases:

>100_bases
GTAGGGTGGCCTGCGCCTACATAATTCGGAAAGCTACTGGCGAGCATGAGTGCTGTGAGACGCTGGAGGAACATGTTCAG
CGGTCTTTGGAAGTGTGGCT

Product: CRISPR-associated helicase Cas3

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>570_residues
MEYGCQPNVLKKTILKMVKRRIHVEGAKKAVNEALLNSQAKAAEEICRIAYESPGGVVFLGAPTGAGKTEVFMAPLLASF
ASKRPIAARGFLVEPMHSLIKAMVDRLKTSIETLGVSEDHGETVQPTFLYTAPITVTTPDTYFYGFAASRVYRILTHEGV
ETGRFSMPVGLQATSYTVFDEAHLVQDEVFLSPRLLSLVVAALARAGGLIVVSSATLPSYYKTVIREKLGDWRVEEVELD
HTVLSPKIDVEVKNNSLEPDDVDCNVKGLVLVNTVSKSIRVYKSLKTRCSNSKVLLLHSLFKRRDKNSKIELLQKLLKEQ
DNGVIAVATQVLEVGVDLDFEALYTETAPIDSVIQRLGRIGRRRGRGYAIIYNAETHHPYPEKLYLKSKEIMDQLAGTYT
PSIRTSSDLVNTVYERDVVDSLARLGDKLMLRALAYLESLAPLSYPPNDDLYFRPSAFIDIAILPCDIVGDGREWEPEWE
EHLVRLSIPLSANERTSGWDRLTRLLSKAKEVYEVRSGPGGRRLIRASQRPKPGSTLVVCLENPEYVYNDEEGLLVSPLV
GGRPRVGGKS

Sequences:
NA

Specific function: NA

COG id: COG1203

COG function: function code R; Predicted helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA