Definition | Aeropyrum pernix K1, complete genome. |
---|---|
Accession | NC_000854 |
Length | 1,669,696 |
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Identifier: 118431420
GI number:
Start: 858609
End: 862574
Strand: Direct
Name: Not Available
Synonym: APE_1353.1
Alternate gene names: NA
Gene position: NA
Preceding gene: 118431418
Following gene: 118431423
Centisome position: NA
GC content: NA
Gene sequence:
>3966_bases TTGAAGAGGCTTTGGGAGAGGATCGCCGATAGCCTGGGGCTGAGGAGGGAGCTTGCGTTCGCCGACGTCCTCGACAACCC CCTGCTCCTGGAGAGGTTTCTCAGCGAGAAGGGCTGCCCGGGGGATGAGGGGCTTCGGGAGGCTGTGGAGAGGGGTCTTC ACGAGATTATTATTAAAGTTAAGGCTGCTGGCTGCAGTGTGCCGGGTGATATTGAACGTGAGGCGGCTGCCGTCCTGATA TTCAATGGTAAGAGGCCTCCCGGCTTGTATGATGTCGAGCCCGGGGGGGTCGCCATTGCCGTTTGCAGCGATGACAGGGT GGTTGTAGGGTATGGTGGGTATGTGCTGGACACCGACTCCATGGGGCCGGGAGGAAAGGCTAGAGTGCTGTCTAACAGCG ACGCCGCTGGGCTGGCGGCATGGAGCCTCGGCGCCTCGATACTTGTGCACTGGGGCTGTCGTACCCGGTACCCCCGGGCT GTAGATGCCTCGCTGCTGTCGGCGATAGCCGTTCCGGAAGCTGGCGGGGATATCGGCCTCAGCATTTACCACTTCTCCGC GGCGCCGGGCAGTGTTGTTGATGCTGTGGCTGATATTGTGTCAAAATCTGTAGCCCTGCTCGAGAGTTTGGGGGTAGATT GGTCTAGAATGCCGCCCGAGGTTAGGCTGGCTCCGGAGGCGACGGTAGCCCGGGGAGAACTAGCTGGTAGCGTTGAAATA AGGAGGTCGGCGGCGGAGGTCGTCGCCTCCGACGCTCCCCGACTCTTCTTCAGGACCTGGAGGCCCTACATCCTAGAGCC GCCCGGGGACCATGGCTATAAGGGGCTCGAGTACGCAGCGTATATGGCTGTAAGAAGTATAGCATACCGGGGAGGCAGCG TCTGGAGGGCTCTGGAGACTGCTCCAGCGAAGCTAGTAGAGCCTATGCTGAGGCTTCTAAGGTCCTCGGAGATCAGGCCT AACCCCCGTCCTCCAGAGCCAGGGGAGCAGGTGGAGGCAGCAGACCTGGGCCTAGCGGGGTGGGGTGGCGAGGTCCTCCT GGACTGTGTGAAGCCTTTGGACCGCTGCCTCTCCGCGGCCCCGCAGGCCTCATCTTCCATGCCAGAGGACCTGAGGATGA GGATTGAAATGGCCTCCAAGAAGCCTGCCAGCCCTAGAAGGTGGGGTAGGCTTAGGATTAGGGTTAGGGGGTGGAGCCCT AGGGAGATAGCGTCTATGCTGGGTGTGGAGACCGCGTCCCAAGCGGATGCTCCCAAGGTTAGGCTTGTTCCCCCTCAGGG AAGGGGGCCCTTGGGGCTTGTCGAGGATCTGAGGCGGATTCTCGAGGGTGAGGATGGTAGGATACTTGTTATAACTCCCG AGGAGAGGCTGGCTTCGCTGGTTGCTGAAGGTCTTGGAGGCTACACGCCGGACTCCCAGGGTGAAGTGTTCCACCGCTGG TTCGTGGAGGGCGGTCTGCTGGTAGTGCCTTGGGGTTATCTACAGGCCCGCCCGGAGATCGCCAATGTGGCTGACAGGAG CGTGGTGCTCCTGCCGGAGGTAATGCTGAGGGATGAGACCCTGGCCCGCATTATACGCCTCTTCTACTCTGGGAGAGCGG GGCTGGTATCAGTCCAGTGGGGTAGGATAGTCGAGCTCCTACATAGGCTGGGCGCGGTTGGTGTCTCCTGGGCCGCCGGG CTTGGCGAGCCCAGAAGCTCTAGCGCGACTGTTGCTGAGGAGGTTGTGGATGACGTTCTGGCCGGCGTTGTCAACAGGCT CCTGGGCGTCTCAAGGCTGAGGCCTGGGCAGGAGGCTGTTTTAAGGAGGATATCACGGGTGTACGCATCCCTCTCACCCT CAGTAACCATTGCCGTTATGCCTACGGGCTATGGAAAATCCCTTCTCTTCCAGGCCCCCGCACGGGGGCTAGCATACCTA GGTTACGGGGCTCTGACCCTCGTTGTGACGCCTCTCAAAGCCCTAATGAGGGACCAGACAAGAGCAGCTCTAGGGAGGGG GCTAGCGGCTTGCTACATCGACTCTAGCCTTAGCCTGAAGGCTAGGGGCGAGGTGCTTAGGGCTGCTGCCATGGGCCTCA TAGACCTCCTCTACATTGCGCCGGAGAGGTTTGAGGACGCTAGGATAAGGGAGGTTGTTGAGGGGGGCAGGCTCGCGCTG GCAGTGTTGGACGAGGCCCACACTGCGTCGAGGTGGGGTGAGACGTTTAGGAACAGCTACCTCTACATGGCTAAAACCCT GGCTAGCTTGAGGCTGGAGGAGGGCTGGCCACCAATCCTGGCCCTGACGGCCACGGCCACACTAGATATTATAGAGTCGC TGGTGGCCATGCTTGGAGCCGCCGACTACTCGGTCGTAGACCTGGAGGAGGATGGCGCTATACCCGGAGAGGGTAGCCCG GAGGAGACTATAGTCTACAGGATAGCCCCCGTCAGGCCGAACATAGCTGTCGAGGCCAGGATTGCTCCCCCCGGGAGGGC AAGACTTGACGTGGCTGCGGAGCATGTGAGGGAGCTCGCAGCATGGGCAACGGGAGTCTCCGAGAGCTGGGTGGGAGCGG TTTTCACGGGGTTCGTCAAGAGTAAGGCTATGGACTGGGCTAACGCTGAGACCATAGCCTCCAGGCTTGAGCCTGCGCTA GGAGGGGTCTGCGAGGTCCTCGTGTACCACGGCCAGATGGGTGAGAAGAGGAGGAAGATGGTGGAGGAGAGGGCGGCTGA GCCCCGGGGGAGGAAGATTATAGTGGCGACTAAGGCGTTCGGCATGGGAGTAGATATTAGGAACCTGAGGTGGACCCTAC ACCTATTCCCCAGCGATTCTGTCGAGGACCTCGTACAGGAGATAGGGAGGGCGGGGAGAGACGGGCTCCCCGCAAGATCG CTGGTCCTATTCGACCCCGAGGACTTCCGGGTTAGACGCGCCATGGGGCTTAGACAGCTTCCACGGCTCTCCTCAGTGCT GGCTCTCTACAACTCTCTCGTCGAACTCCATGGGAGGGAGGAGAGCTACACCCTCGTCCTAACACCACCCGCAGTGCCTC CAAAGGTGGTCAGGCTCCTCGACATACTGAGGACCTCCGGGCTGCTTGACTACAGTATAACCAGGCGCCTACACCTATAT AGGCTGAGGAAGGGTGTCTCGTGGAGGGATCTAGAGGAGGCTGGCGTCACCCCCAGGCTTGTGCTGCCGAGGCTTGGCAT AGTTGGGTTCGAGGAGAAGGTACCCCCCGGGGAGATGCTGGAGCCTGCGAGCCTCTCGATAAAGCTGTGTATAAGTCCCG ACAACTCCTTTGAAATATTCTACGGCAGGCATGGCAACACAGGTAGGGAGTGCCGTAGAGCCGTGATAGAGAGGTCAGGC GTGGCGTTGCTAATAGATCTCAACCCGGACGTCAGGCACAGGAGCATTACAAAGCCGACTCCAGACCTGCTCGTATATCA TGCCAGGCTCGCCTCCCTAGAAGCCCTGAAGGTGGAGAGGCTTAGAAAGCTCCTCGAAAGCCTCTCTGGCCTGCGGGGTG AAAAGTCGAGCCAGGCTTTTAGAGAGGGTGTTAGAGAATACTTCAACAAACCTCTCCTCAGGCCTCTGCCTGAGAACCCT GAAAAGGCTTTGAAGCAGCCGCGGTCTATAGAGTGCGCGGGCGTCTCAAAATGCCGCGCCCTAGCAGCTACCCTCGAGAG GTTAGTGGAGGTCCTCGGCCCCTTAGGCGTTACTATAGCTGTCCCCAGCGGGGAAGCTAGGGCTTCATTCCTCAGAGCAT ACAGCAGCCTCTTCCCAGTGGAGCCCAGAATTGTAGGTGTCAGGAAGGTGCTTAATAGGCTGAAAGCAGGTGGAGTCGCA GCAGCCGACCTCGGCTATGTAGTGGCGGTTACACACAAGGAGAGCCAATACAATATGCTCCTTTCCACGGTAGAAGGCTC AGGCTACCCCTACGTGACCGTTGTACATGCTAAAATGCCAGTATAA
Upstream 100 bases:
>100_bases TACACCTCCCTCCGAGACCGCAGGGGGGTTTTGACCTAATTAGAGGGACCCACCCTACCTAATTCCGGTAGGGGCTGAAG GGTTCGGCGGGTGCTGGTTG
Downstream 100 bases:
>100_bases CCGCTGTTAGCTGATAGCAGCAATACAAACCCCCCGTGTTTCAGTAATCTATCCTATCTAGGTTACTTTGGGCGCAGGTC GGAGGTGTCTGATGGTGATG
Product: ATP-dependent helicase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1321_residues MKRLWERIADSLGLRRELAFADVLDNPLLLERFLSEKGCPGDEGLREAVERGLHEIIIKVKAAGCSVPGDIEREAAAVLI FNGKRPPGLYDVEPGGVAIAVCSDDRVVVGYGGYVLDTDSMGPGGKARVLSNSDAAGLAAWSLGASILVHWGCRTRYPRA VDASLLSAIAVPEAGGDIGLSIYHFSAAPGSVVDAVADIVSKSVALLESLGVDWSRMPPEVRLAPEATVARGELAGSVEI RRSAAEVVASDAPRLFFRTWRPYILEPPGDHGYKGLEYAAYMAVRSIAYRGGSVWRALETAPAKLVEPMLRLLRSSEIRP NPRPPEPGEQVEAADLGLAGWGGEVLLDCVKPLDRCLSAAPQASSSMPEDLRMRIEMASKKPASPRRWGRLRIRVRGWSP REIASMLGVETASQADAPKVRLVPPQGRGPLGLVEDLRRILEGEDGRILVITPEERLASLVAEGLGGYTPDSQGEVFHRW FVEGGLLVVPWGYLQARPEIANVADRSVVLLPEVMLRDETLARIIRLFYSGRAGLVSVQWGRIVELLHRLGAVGVSWAAG LGEPRSSSATVAEEVVDDVLAGVVNRLLGVSRLRPGQEAVLRRISRVYASLSPSVTIAVMPTGYGKSLLFQAPARGLAYL GYGALTLVVTPLKALMRDQTRAALGRGLAACYIDSSLSLKARGEVLRAAAMGLIDLLYIAPERFEDARIREVVEGGRLAL AVLDEAHTASRWGETFRNSYLYMAKTLASLRLEEGWPPILALTATATLDIIESLVAMLGAADYSVVDLEEDGAIPGEGSP EETIVYRIAPVRPNIAVEARIAPPGRARLDVAAEHVRELAAWATGVSESWVGAVFTGFVKSKAMDWANAETIASRLEPAL GGVCEVLVYHGQMGEKRRKMVEERAAEPRGRKIIVATKAFGMGVDIRNLRWTLHLFPSDSVEDLVQEIGRAGRDGLPARS LVLFDPEDFRVRRAMGLRQLPRLSSVLALYNSLVELHGREESYTLVLTPPAVPPKVVRLLDILRTSGLLDYSITRRLHLY RLRKGVSWRDLEEAGVTPRLVLPRLGIVGFEEKVPPGEMLEPASLSIKLCISPDNSFEIFYGRHGNTGRECRRAVIERSG VALLIDLNPDVRHRSITKPTPDLLVYHARLASLEALKVERLRKLLESLSGLRGEKSSQAFREGVREYFNKPLLRPLPENP EKALKQPRSIECAGVSKCRALAATLERLVEVLGPLGVTIAVPSGEARASFLRAYSSLFPVEPRIVGVRKVLNRLKAGGVA AADLGYVVAVTHKESQYNMLLSTVEGSGYPYVTVVHAKMPV
Sequences:
NA
Specific function: NA
COG id: COG0514
COG function: function code L; Superfamily II DNA helicase
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA