Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99081039

Identifier: 99081039

GI number: 99081039

Start: 1288731

End: 1289417

Strand: Direct

Name: 99081039

Synonym: TM1040_1198

Alternate gene names: NA

Gene position: 1288731-1289417 (Clockwise)

Preceding gene: 99081038

Following gene: 99081040

Centisome position: 40.26

GC content: 59.39

Gene sequence:

>687_bases
ATGACCCTGATTCTGCGCCTTGATACCAGCCCCCGTGTAAAAGGGGCGTACTCTCGTCATCTGGGAGATCGGTTCATCGA
AGAATGGATCAACCGACGCAGTGATATGCGGCTTATCGCGCGCGACATTGGGTGTCCTTCGCCAAGTGCCCCTGGGGGAT
TGCATGATCCGCGCCTGTGTTTTGATACGGCCAAAAAACAATACATCCCGTGCAACCATCGAAAGAGGTTGTCTGCAGGG
ATATATGCAGAGGTCGATGCAGCCGAGGTCATCGTCATCACCGCGCCTCTGGGCGTTGATGGTGTGCCCGCTGCATTGAC
GGAATGGTGTGATCACGTGGCGCAGGCCCAATCACGCCGCGCCTCTGGGCCTTTTGGGCGGCGGTACGCCCGCAATGCCA
TGCTCATGGGGAAGATGATTGTGCTCCTGAGCGCCTGGGAAGAGGACCTTTGGAGCGACCGTGACGGGGCAAGCCTGCCG
CATTTGAATGTCGAGACGCGCCCACTTGGTGCATCGGTCATCCACCACATGCACATCGCGCGATCTGGTATGGGCCATGA
GGCGCAGGCCCTCTCGAGGTTCACTGCCGCAGGTGTGCTGGAGGATCTTGTGGCCCGCTTCGCGCATCCAAGATCCCACG
CTGAGTCTGTGGTCACAGCATCCGCGTGTTCGGCCCAAGTGGCTTGA

Upstream 100 bases:

>100_bases
TCGACGTCCTGTCCACAGGCGGCGTCACTTTCCTTTCTGGGTAAGCGTGTTTTGGCCGCTTCGCTTTTGTTGATTTCCTG
CCTTGAGGAGAACCATCGCC

Downstream 100 bases:

>100_bases
ATTTCGGATTGCTGCCGATCAACTCTACGTCATCAAGGGGCGCGTTTCCGGCCTGAGAGGCTGAGCCATTGACGTCCAGA
CGTATCAGCATGCTCGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTLILRLDTSPRVKGAYSRHLGDRFIEEWINRRSDMRLIARDIGCPSPSAPGGLHDPRLCFDTAKKQYIPCNHRKRLSAG
IYAEVDAAEVIVITAPLGVDGVPAALTEWCDHVAQAQSRRASGPFGRRYARNAMLMGKMIVLLSAWEEDLWSDRDGASLP
HLNVETRPLGASVIHHMHIARSGMGHEAQALSRFTAAGVLEDLVARFAHPRSHAESVVTASACSAQVA

Sequences:

>Translated_228_residues
MTLILRLDTSPRVKGAYSRHLGDRFIEEWINRRSDMRLIARDIGCPSPSAPGGLHDPRLCFDTAKKQYIPCNHRKRLSAG
IYAEVDAAEVIVITAPLGVDGVPAALTEWCDHVAQAQSRRASGPFGRRYARNAMLMGKMIVLLSAWEEDLWSDRDGASLP
HLNVETRPLGASVIHHMHIARSGMGHEAQALSRFTAAGVLEDLVARFAHPRSHAESVVTASACSAQVA
>Mature_227_residues
TLILRLDTSPRVKGAYSRHLGDRFIEEWINRRSDMRLIARDIGCPSPSAPGGLHDPRLCFDTAKKQYIPCNHRKRLSAGI
YAEVDAAEVIVITAPLGVDGVPAALTEWCDHVAQAQSRRASGPFGRRYARNAMLMGKMIVLLSAWEEDLWSDRDGASLPH
LNVETRPLGASVIHHMHIARSGMGHEAQALSRFTAAGVLEDLVARFAHPRSHAESVVTASACSAQVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24951; Mature: 24820

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLILRLDTSPRVKGAYSRHLGDRFIEEWINRRSDMRLIARDIGCPSPSAPGGLHDPRLC
CEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHH
FDTAKKQYIPCNHRKRLSAGIYAEVDAAEVIVITAPLGVDGVPAALTEWCDHVAQAQSRR
HHHHHCCCCCCCCHHHHCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC
ASGPFGRRYARNAMLMGKMIVLLSAWEEDLWSDRDGASLPHLNVETRPLGASVIHHMHIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RSGMGHEAQALSRFTAAGVLEDLVARFAHPRSHAESVVTASACSAQVA
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLILRLDTSPRVKGAYSRHLGDRFIEEWINRRSDMRLIARDIGCPSPSAPGGLHDPRLC
EEEEEECCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCHHH
FDTAKKQYIPCNHRKRLSAGIYAEVDAAEVIVITAPLGVDGVPAALTEWCDHVAQAQSRR
HHHHHCCCCCCCCHHHHCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHC
ASGPFGRRYARNAMLMGKMIVLLSAWEEDLWSDRDGASLPHLNVETRPLGASVIHHMHIA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
RSGMGHEAQALSRFTAAGVLEDLVARFAHPRSHAESVVTASACSAQVA
HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA