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The map label for this gene is 99080983

Identifier: 99080983

GI number: 99080983

Start: 1227757

End: 1229316

Strand: Direct

Name: 99080983

Synonym: TM1040_1142

Alternate gene names: NA

Gene position: 1227757-1229316 (Clockwise)

Preceding gene: 99080975

Following gene: 99080989

Centisome position: 38.36

GC content: 66.22

Gene sequence:

>1560_bases
ATGGGCGGCGCGCGTGAGAAAGAGCACAGGCGAGAAGGCGAAACAGGCATGCGAGGATTTCTGGGTGGCGTGAGCGTAGG
GGCGCTGGTCGCAGTTGCGGGGGCGGCGGTGTGGTCGCTGTCGACGCCATTGCCGCAGGCGGTCGATGTCTCGCAGGAAC
TGCCCGTCACAACATTGCAGCCGCGTGAGGTTCCAGCGCCCCCGTCCGATGTGCCCGGAAGCGACGCAGATCTGGTTGAG
GCCGCCCCAGCGGAACCCGATGCAAATGCCCTTGGCCGAGACAGCGCCCCAGATGAGATCGACACTTCGCTGCCAGAGCG
TCCCAGCGTTTCGACCGATCCCGAGGTCACATTGGATGGCGCCCCGGTTCAGAGCGACACCCCCCGGATTGCGGTGACTT
CCGATGCGGATGCGCCCGTGTCTGGTGGCGATGACAGCATCCGCCCTGAGGCGCCCTCGCAAGACACCACACCGGATCTG
GGAGCAGATTCCGCCACACGGCCCGAGGTTTCGGCGGCCTCAGACCTGCCACTGCAGGCGCCAGACGCGGAAATCCCCAC
CCCCGATCTGTCGACCGAGGCCGATCCGGCGCCCCTGCGCCAGGAGACGCTTCAAGTGGAGGCGCCAGATATCGGCACGC
CTCCGGATGTGACCGCGTCGCCCGTGTTGACCACTCCGCCCGTGCGGTCGCTCACCCCTTCTGATCCGGTCGAGGACAAC
GCGGGGGCAAATGGGGGCGTGAGAATCGCGGATCTGCCGCAGGCCTCCGAGGACCCAGAGACAAATGCAGGACCCAGTAT
CGGCACGCGCGTGCTGCCACTGACAGAACGCGACACCACGGGCGCGGATGCGTCTTCTGCAGCAGACAGTAGTGCTGCGC
CCTTTGTGCGCAACAGCGAGCCGGCAAACCCGGAGCCGGGCCTGCCCTTGATGTCGATTGTCCTCGTCGAAGAAGAAGGC
GCGGTGGGCGCCGAGGCGCTTGAGGATTTCCCCTATCCGCTGACGTTTACCATCGACCCGAGCGACCCGGATGCGGTGGC
ACGCATGAAAGCCCGGCGCGCGGCGGGGTTTGAGGTCATGGTGTTGGCGGATCTGCCCCGCGAAGGCCAGCCGCAGGACG
CCGAAACCGCGATGCCGGTGTGGTTTGACCGCCTTCCAGAGGCGGTGGGCATCCTTGAGGGCATCGACAGCGGCGTGCAG
GGCAACCGGGCGCTTGCGGATCAGGTGGCCAGCATCGCCGGTGATCTGGGCTATGGGCTGGTGCTACAGGACAATGGCCT
GAACACGGTCCACAAAATGGCGCTGCGCGATGGTATTCCTTCGGGCGTGGTGTTTCGCGACTTTGACGGCGCGGGTCAGG
ACCCGCGCGCCATGCGCCGTTTTCTGGACCAGGCCGCGTTCCGCTCCGGTCAGGAGGGCGCGGTCATCATGCTGGGACGT
CTGAAGCCGGACACGATTTCCGCGCTGCTGATCTGGGGGCTGCAAGACCGCGCCAGCAGCGTGGCGCTGGTGCCGATCTC
GACCAGTCTCAAACGCCTGCTGGAGCCGGTCTCAAACTAA

Upstream 100 bases:

>100_bases
GTGTGGGACCATACATGTTCAGGGATGCGCGGCAGCGTCAAGGGCACATCCGGTCTGGCGCGCGTCAGACGGTAAAGATG
ACCGGCGCTGAGGCCTTTGG

Downstream 100 bases:

>100_bases
TACCGTCGGCCAATGCGACAGCCGAATGTCAAAAAAAACGCGCTCCACGAGGATCTCGGGAGCGCGTTTTTCTTTTCCCT
GCTGGGCATTTAGCTCAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Divergent Polysaccharide Deacetylase Family

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MGGAREKEHRREGETGMRGFLGGVSVGALVAVAGAAVWSLSTPLPQAVDVSQELPVTTLQPREVPAPPSDVPGSDADLVE
AAPAEPDANALGRDSAPDEIDTSLPERPSVSTDPEVTLDGAPVQSDTPRIAVTSDADAPVSGGDDSIRPEAPSQDTTPDL
GADSATRPEVSAASDLPLQAPDAEIPTPDLSTEADPAPLRQETLQVEAPDIGTPPDVTASPVLTTPPVRSLTPSDPVEDN
AGANGGVRIADLPQASEDPETNAGPSIGTRVLPLTERDTTGADASSAADSSAAPFVRNSEPANPEPGLPLMSIVLVEEEG
AVGAEALEDFPYPLTFTIDPSDPDAVARMKARRAAGFEVMVLADLPREGQPQDAETAMPVWFDRLPEAVGILEGIDSGVQ
GNRALADQVASIAGDLGYGLVLQDNGLNTVHKMALRDGIPSGVVFRDFDGAGQDPRAMRRFLDQAAFRSGQEGAVIMLGR
LKPDTISALLIWGLQDRASSVALVPISTSLKRLLEPVSN

Sequences:

>Translated_519_residues
MGGAREKEHRREGETGMRGFLGGVSVGALVAVAGAAVWSLSTPLPQAVDVSQELPVTTLQPREVPAPPSDVPGSDADLVE
AAPAEPDANALGRDSAPDEIDTSLPERPSVSTDPEVTLDGAPVQSDTPRIAVTSDADAPVSGGDDSIRPEAPSQDTTPDL
GADSATRPEVSAASDLPLQAPDAEIPTPDLSTEADPAPLRQETLQVEAPDIGTPPDVTASPVLTTPPVRSLTPSDPVEDN
AGANGGVRIADLPQASEDPETNAGPSIGTRVLPLTERDTTGADASSAADSSAAPFVRNSEPANPEPGLPLMSIVLVEEEG
AVGAEALEDFPYPLTFTIDPSDPDAVARMKARRAAGFEVMVLADLPREGQPQDAETAMPVWFDRLPEAVGILEGIDSGVQ
GNRALADQVASIAGDLGYGLVLQDNGLNTVHKMALRDGIPSGVVFRDFDGAGQDPRAMRRFLDQAAFRSGQEGAVIMLGR
LKPDTISALLIWGLQDRASSVALVPISTSLKRLLEPVSN
>Mature_518_residues
GGAREKEHRREGETGMRGFLGGVSVGALVAVAGAAVWSLSTPLPQAVDVSQELPVTTLQPREVPAPPSDVPGSDADLVEA
APAEPDANALGRDSAPDEIDTSLPERPSVSTDPEVTLDGAPVQSDTPRIAVTSDADAPVSGGDDSIRPEAPSQDTTPDLG
ADSATRPEVSAASDLPLQAPDAEIPTPDLSTEADPAPLRQETLQVEAPDIGTPPDVTASPVLTTPPVRSLTPSDPVEDNA
GANGGVRIADLPQASEDPETNAGPSIGTRVLPLTERDTTGADASSAADSSAAPFVRNSEPANPEPGLPLMSIVLVEEEGA
VGAEALEDFPYPLTFTIDPSDPDAVARMKARRAAGFEVMVLADLPREGQPQDAETAMPVWFDRLPEAVGILEGIDSGVQG
NRALADQVASIAGDLGYGLVLQDNGLNTVHKMALRDGIPSGVVFRDFDGAGQDPRAMRRFLDQAAFRSGQEGAVIMLGRL
KPDTISALLIWGLQDRASSVALVPISTSLKRLLEPVSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53766; Mature: 53635

Theoretical pI: Translated: 3.91; Mature: 3.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGAREKEHRREGETGMRGFLGGVSVGALVAVAGAAVWSLSTPLPQAVDVSQELPVTTLQ
CCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHCCCCEECC
PREVPAPPSDVPGSDADLVEAAPAEPDANALGRDSAPDEIDTSLPERPSVSTDPEVTLDG
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEECC
APVQSDTPRIAVTSDADAPVSGGDDSIRPEAPSQDTTPDLGADSATRPEVSAASDLPLQA
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDAEIPTPDLSTEADPAPLRQETLQVEAPDIGTPPDVTASPVLTTPPVRSLTPSDPVEDN
CCCCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
AGANGGVRIADLPQASEDPETNAGPSIGTRVLPLTERDTTGADASSAADSSAAPFVRNSE
CCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PANPEPGLPLMSIVLVEEEGAVGAEALEDFPYPLTFTIDPSDPDAVARMKARRAAGFEVM
CCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE
VLADLPREGQPQDAETAMPVWFDRLPEAVGILEGIDSGVQGNRALADQVASIAGDLGYGL
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEE
VLQDNGLNTVHKMALRDGIPSGVVFRDFDGAGQDPRAMRRFLDQAAFRSGQEGAVIMLGR
EEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC
LKPDTISALLIWGLQDRASSVALVPISTSLKRLLEPVSN
CCCHHEEEEEEECCCCCCCCEEEEECHHHHHHHHHHHCC
>Mature Secondary Structure 
GGAREKEHRREGETGMRGFLGGVSVGALVAVAGAAVWSLSTPLPQAVDVSQELPVTTLQ
CCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHCCCCEECC
PREVPAPPSDVPGSDADLVEAAPAEPDANALGRDSAPDEIDTSLPERPSVSTDPEVTLDG
CCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEECC
APVQSDTPRIAVTSDADAPVSGGDDSIRPEAPSQDTTPDLGADSATRPEVSAASDLPLQA
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDAEIPTPDLSTEADPAPLRQETLQVEAPDIGTPPDVTASPVLTTPPVRSLTPSDPVEDN
CCCCCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC
AGANGGVRIADLPQASEDPETNAGPSIGTRVLPLTERDTTGADASSAADSSAAPFVRNSE
CCCCCCEEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PANPEPGLPLMSIVLVEEEGAVGAEALEDFPYPLTFTIDPSDPDAVARMKARRAAGFEVM
CCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCCEEE
VLADLPREGQPQDAETAMPVWFDRLPEAVGILEGIDSGVQGNRALADQVASIAGDLGYGL
EEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCEE
VLQDNGLNTVHKMALRDGIPSGVVFRDFDGAGQDPRAMRRFLDQAAFRSGQEGAVIMLGR
EEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEC
LKPDTISALLIWGLQDRASSVALVPISTSLKRLLEPVSN
CCCHHEEEEEEECCCCCCCCEEEEECHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA