| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080882
Identifier: 99080882
GI number: 99080882
Start: 1122288
End: 1122662
Strand: Direct
Name: 99080882
Synonym: TM1040_1041
Alternate gene names: NA
Gene position: 1122288-1122662 (Clockwise)
Preceding gene: 99080881
Following gene: 99080887
Centisome position: 35.06
GC content: 55.2
Gene sequence:
>375_bases ATGCGCACGAATGTGCAGCGCTACCGTTGTGGAAGCTGTAAAAAGACCTTCAGTGGACGCACTGGCACACGGATTGCGCG CATTCATCGGCCAGGGCTGTTCTTCGATGTGTTGAAGGATATGCCGGGGCCACGCCCGCTATCATCCGTTCGCGTGCTGG CAAGATGCCTTGGTCTCAACAAACACACAGTATGGCGCTGGCGTTTGATTGCACTCTCCGCTCTTTCTGGCACATCCGAT ACGGACTTTTCAGGCATCGTTGAGGCCGACGAAACATACCAGAGGGAATCCCGCAAAGGCAGTCGTGAGTGGATCAGACA TCAGCGCGATCCTCTCGACGACTCCAAGCCTCCTAGAATGCGCTGGTATGAATAG
Upstream 100 bases:
>100_bases GGCTCGGATTAGGATAAAGGAAGCACTCGCTCAAATCGAGGGTTGCGGCGCTCGTGAATGCCCCCAGTGCGGTAGCGGCA AGCGTTAAAAATGGGGCAAG
Downstream 100 bases:
>100_bases GGCAAGAAAGGGGTGCCTATGCTGTGCGGTCTCTCCAAGTGGCAGTTGCCCATTCTCACTGTTGTTGATCGTTACCGTGC CCGCTGCTTTGAGCGCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MRTNVQRYRCGSCKKTFSGRTGTRIARIHRPGLFFDVLKDMPGPRPLSSVRVLARCLGLNKHTVWRWRLIALSALSGTSD TDFSGIVEADETYQRESRKGSREWIRHQRDPLDDSKPPRMRWYE
Sequences:
>Translated_124_residues MRTNVQRYRCGSCKKTFSGRTGTRIARIHRPGLFFDVLKDMPGPRPLSSVRVLARCLGLNKHTVWRWRLIALSALSGTSD TDFSGIVEADETYQRESRKGSREWIRHQRDPLDDSKPPRMRWYE >Mature_124_residues MRTNVQRYRCGSCKKTFSGRTGTRIARIHRPGLFFDVLKDMPGPRPLSSVRVLARCLGLNKHTVWRWRLIALSALSGTSD TDFSGIVEADETYQRESRKGSREWIRHQRDPLDDSKPPRMRWYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14479; Mature: 14479
Theoretical pI: Translated: 11.21; Mature: 11.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTNVQRYRCGSCKKTFSGRTGTRIARIHRPGLFFDVLKDMPGPRPLSSVRVLARCLGLN CCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHCCC KHTVWRWRLIALSALSGTSDTDFSGIVEADETYQRESRKGSREWIRHQRDPLDDSKPPRM CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCC RWYE CCCC >Mature Secondary Structure MRTNVQRYRCGSCKKTFSGRTGTRIARIHRPGLFFDVLKDMPGPRPLSSVRVLARCLGLN CCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHCCC KHTVWRWRLIALSALSGTSDTDFSGIVEADETYQRESRKGSREWIRHQRDPLDDSKPPRM CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCC RWYE CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA