Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080882

Identifier: 99080882

GI number: 99080882

Start: 1122288

End: 1122662

Strand: Direct

Name: 99080882

Synonym: TM1040_1041

Alternate gene names: NA

Gene position: 1122288-1122662 (Clockwise)

Preceding gene: 99080881

Following gene: 99080887

Centisome position: 35.06

GC content: 55.2

Gene sequence:

>375_bases
ATGCGCACGAATGTGCAGCGCTACCGTTGTGGAAGCTGTAAAAAGACCTTCAGTGGACGCACTGGCACACGGATTGCGCG
CATTCATCGGCCAGGGCTGTTCTTCGATGTGTTGAAGGATATGCCGGGGCCACGCCCGCTATCATCCGTTCGCGTGCTGG
CAAGATGCCTTGGTCTCAACAAACACACAGTATGGCGCTGGCGTTTGATTGCACTCTCCGCTCTTTCTGGCACATCCGAT
ACGGACTTTTCAGGCATCGTTGAGGCCGACGAAACATACCAGAGGGAATCCCGCAAAGGCAGTCGTGAGTGGATCAGACA
TCAGCGCGATCCTCTCGACGACTCCAAGCCTCCTAGAATGCGCTGGTATGAATAG

Upstream 100 bases:

>100_bases
GGCTCGGATTAGGATAAAGGAAGCACTCGCTCAAATCGAGGGTTGCGGCGCTCGTGAATGCCCCCAGTGCGGTAGCGGCA
AGCGTTAAAAATGGGGCAAG

Downstream 100 bases:

>100_bases
GGCAAGAAAGGGGTGCCTATGCTGTGCGGTCTCTCCAAGTGGCAGTTGCCCATTCTCACTGTTGTTGATCGTTACCGTGC
CCGCTGCTTTGAGCGCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MRTNVQRYRCGSCKKTFSGRTGTRIARIHRPGLFFDVLKDMPGPRPLSSVRVLARCLGLNKHTVWRWRLIALSALSGTSD
TDFSGIVEADETYQRESRKGSREWIRHQRDPLDDSKPPRMRWYE

Sequences:

>Translated_124_residues
MRTNVQRYRCGSCKKTFSGRTGTRIARIHRPGLFFDVLKDMPGPRPLSSVRVLARCLGLNKHTVWRWRLIALSALSGTSD
TDFSGIVEADETYQRESRKGSREWIRHQRDPLDDSKPPRMRWYE
>Mature_124_residues
MRTNVQRYRCGSCKKTFSGRTGTRIARIHRPGLFFDVLKDMPGPRPLSSVRVLARCLGLNKHTVWRWRLIALSALSGTSD
TDFSGIVEADETYQRESRKGSREWIRHQRDPLDDSKPPRMRWYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14479; Mature: 14479

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTNVQRYRCGSCKKTFSGRTGTRIARIHRPGLFFDVLKDMPGPRPLSSVRVLARCLGLN
CCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHCCC
KHTVWRWRLIALSALSGTSDTDFSGIVEADETYQRESRKGSREWIRHQRDPLDDSKPPRM
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCC
RWYE
CCCC
>Mature Secondary Structure
MRTNVQRYRCGSCKKTFSGRTGTRIARIHRPGLFFDVLKDMPGPRPLSSVRVLARCLGLN
CCCCCCCCCCCCCHHHCCCCCCCEEEEEECCCHHHHHHHCCCCCCCHHHHHHHHHHHCCC
KHTVWRWRLIALSALSGTSDTDFSGIVEADETYQRESRKGSREWIRHQRDPLDDSKPPRM
CCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCC
RWYE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA