| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is fljL [H]
Identifier: 99080879
GI number: 99080879
Start: 1118812
End: 1119660
Strand: Direct
Name: fljL [H]
Synonym: TM1040_1038
Alternate gene names: 99080879
Gene position: 1118812-1119660 (Clockwise)
Preceding gene: 99080876
Following gene: 99080880
Centisome position: 34.95
GC content: 59.36
Gene sequence:
>849_bases ATGTCCAGCATTCTGACAAACAACGGCGCAATGGTTGCGCTCCAGACCCTGAAGTCCGTCAACGACGACCTCGGCAAAGT TCAAACCAGCATTTCCACCGGTAAAGAGGTGGGTACAGCGAAAGACAATTCCGCTGTTTGGGCGATCTCCAAGACCATGG AATCCGACATCGCAGGCTTTGAAGCCATTGAGGATGGCCTCTCCGTGGGTGAAGCCACCGTTGCGGTTGCCTCCGCCGGT GCCGAGCAGATCGTTGAAAAACTGACCGAGATGAAAGAGCTGATCGTCTCCGCGCAGTCCGAAAACGTGGACCACGCCAA GATCCAGACAGACATCGACTCCAAAGTGGCACAGGTCGATGCGATCATCTCCGCTGCGCAGTTCAACGGTGCCAACCTGC TGGCGACCGACGTTGACGGCAATGGCGCAACCAGCCTGGGTGTTCTGGCGTCGCTGGACCGTGAGGGTGCCGGTGGCACT GTGACCGCGGTTGAGATCAGCGTAGCGTCGGTTGACTTCGAGGCGGACCTTGATCTGTCTTCCAGCCTGACCTCGATCAC CGACTCCACCACCGCGGCCACCGCGCTGGGTGAGATCGAGACCATGATCCAGACTGCAATCACCGGTGCGGCTTCGTTGG GTGCGGATGCTGCACGTCTCGAGGACCAGTCCGAATTTGTGGGCAACCTCGTTGACTCCATGACCCTCGGTGTGTCGACC ATGACGGACACCGACATGGAAGAAGCCTCCGCGCGTCTGTCTGCTCTGCAGACCCAGCAGGATCTTGCGACCCAGTCGCT GACCATCGCGAATGAAGCGCCGAGCTCGCTGCTGCAGCTCTTCCGCTAA
Upstream 100 bases:
>100_bases ATGCAGGTTTAGGACGGGACCACTCGCCCCCGTGTAACGGGATAACCTGAATTTAGGACAGCTGTAAAAGCCACTGTCCT GCCACTAGATAAGGTGCTCT
Downstream 100 bases:
>100_bases GACGTATTTCACGCGTTGAATTGGATCGCCGGCCCCTTGGGGTCGGCGATTTTCGTTTTTATCCCAAGTGTTTGGCAGGA TTTTATGATGCATTTTCGAC
Product: flagellin-like
Products: NA
Alternate protein names: 27 kDa flagellin [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSSILTNNGAMVALQTLKSVNDDLGKVQTSISTGKEVGTAKDNSAVWAISKTMESDIAGFEAIEDGLSVGEATVAVASAG AEQIVEKLTEMKELIVSAQSENVDHAKIQTDIDSKVAQVDAIISAAQFNGANLLATDVDGNGATSLGVLASLDREGAGGT VTAVEISVASVDFEADLDLSSSLTSITDSTTAATALGEIETMIQTAITGAASLGADAARLEDQSEFVGNLVDSMTLGVST MTDTDMEEASARLSALQTQQDLATQSLTIANEAPSSLLQLFR
Sequences:
>Translated_282_residues MSSILTNNGAMVALQTLKSVNDDLGKVQTSISTGKEVGTAKDNSAVWAISKTMESDIAGFEAIEDGLSVGEATVAVASAG AEQIVEKLTEMKELIVSAQSENVDHAKIQTDIDSKVAQVDAIISAAQFNGANLLATDVDGNGATSLGVLASLDREGAGGT VTAVEISVASVDFEADLDLSSSLTSITDSTTAATALGEIETMIQTAITGAASLGADAARLEDQSEFVGNLVDSMTLGVST MTDTDMEEASARLSALQTQQDLATQSLTIANEAPSSLLQLFR >Mature_281_residues SSILTNNGAMVALQTLKSVNDDLGKVQTSISTGKEVGTAKDNSAVWAISKTMESDIAGFEAIEDGLSVGEATVAVASAGA EQIVEKLTEMKELIVSAQSENVDHAKIQTDIDSKVAQVDAIISAAQFNGANLLATDVDGNGATSLGVLASLDREGAGGTV TAVEISVASVDFEADLDLSSSLTSITDSTTAATALGEIETMIQTAITGAASLGADAARLEDQSEFVGNLVDSMTLGVSTM TDTDMEEASARLSALQTQQDLATQSLTIANEAPSSLLQLFR
Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
None
Paralogues:
None
Copy number: 200,000-400,000 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001029 [H]
Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 28884; Mature: 28753
Theoretical pI: Translated: 3.71; Mature: 3.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSILTNNGAMVALQTLKSVNDDLGKVQTSISTGKEVGTAKDNSAVWAISKTMESDIAGF CCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHH EAIEDGLSVGEATVAVASAGAEQIVEKLTEMKELIVSAQSENVDHAKIQTDIDSKVAQVD HHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AIISAAQFNGANLLATDVDGNGATSLGVLASLDREGAGGTVTAVEISVASVDFEADLDLS HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCH SSLTSITDSTTAATALGEIETMIQTAITGAASLGADAARLEDQSEFVGNLVDSMTLGVST HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHCCCC MTDTDMEEASARLSALQTQQDLATQSLTIANEAPSSLLQLFR CCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHC >Mature Secondary Structure SSILTNNGAMVALQTLKSVNDDLGKVQTSISTGKEVGTAKDNSAVWAISKTMESDIAGF CCEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHH EAIEDGLSVGEATVAVASAGAEQIVEKLTEMKELIVSAQSENVDHAKIQTDIDSKVAQVD HHHHHHHHHCHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AIISAAQFNGANLLATDVDGNGATSLGVLASLDREGAGGTVTAVEISVASVDFEADLDLS HHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCCCH SSLTSITDSTTAATALGEIETMIQTAITGAASLGADAARLEDQSEFVGNLVDSMTLGVST HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCHHHHHHHHHHHHHHHCCCC MTDTDMEEASARLSALQTQQDLATQSLTIANEAPSSLLQLFR CCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10940048; 11259647; 3469658; 1699845 [H]