Definition | Ruegeria sp. TM1040, complete genome. |
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Accession | NC_008044 |
Length | 3,200,938 |
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The map label for this gene is zraR [C]
Identifier: 99080872
GI number: 99080872
Start: 1110483
End: 1110878
Strand: Direct
Name: zraR [C]
Synonym: TM1040_1031
Alternate gene names: 99080872
Gene position: 1110483-1110878 (Clockwise)
Preceding gene: 99080871
Following gene: 99080873
Centisome position: 34.69
GC content: 60.86
Gene sequence:
>396_bases ATGACCAAGGTTCTGATTGTCGATGACAGCCCGGAGGACACCGAGATGCTGCGCAGGTTCTGCAGCGAGCTGCCCTCCTG CGTGATCGAGACCGCTGCCAGCGGTAGCGAGGGCGTGGCGCGGTTTGAAAAATGGCACGCAGATTGCGTACTGCTGGACT ATCACCTCGCCGATAACAATGGTCTTTCGGTACTGGCGGATCTCAAGGCGCGCGATCCCTTTGTACCGGTGATCGTTCTG TCGGGACGCGGCAGCGAAGAGCTGGCTGCGGCCACGATGAAAGCTGGCGCCACGCGCTATCTGACCAAGCGCGGGCTGTC GCTTGATATGCTGCGCACCGCCATCGAGGCCTCGATCCGATGGATGCAGCACGCAGCCTTATCGCAGCGCAAATAG
Upstream 100 bases:
>100_bases CCACCCCCGGAGAGGGGACTACCTTTTACTTTTCGCTGCCCAATGCGAAAGGTGAAGAGGCGATTTCTGTGACGGGCGAG GCGAGATTGGCGGACGCAAA
Downstream 100 bases:
>100_bases GTGCTGCTGGCCAGCCCTCGCTGCACCCGAGGCGCCGGGGTGTGGCTCCGTTTCCCAAAACCGATTGCCGTGGTTGACGC CAGCCCAGCGGGGGCGCCCG
Product: response regulator receiver protein
Products: NA
Alternate protein names: Multi-Sensor Hybrid Histidine Kinase; Two Component; PAS/PAC Sensor Protein; Response Regulator Receiver Protein; Two-Component Hybrid Sensor And Regulator; PAS/PAC Sensor Hybrid Histidine Kinase; Signal Transduction Histidine Kinase; HTR-Like Protein; Sensor Protein; Response Regulator Receiver; Signal Transduction Protein; ATPase Histidine Kinase- DNA Gyrase B- And
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTKVLIVDDSPEDTEMLRRFCSELPSCVIETAASGSEGVARFEKWHADCVLLDYHLADNNGLSVLADLKARDPFVPVIVL SGRGSEELAAATMKAGATRYLTKRGLSLDMLRTAIEASIRWMQHAALSQRK
Sequences:
>Translated_131_residues MTKVLIVDDSPEDTEMLRRFCSELPSCVIETAASGSEGVARFEKWHADCVLLDYHLADNNGLSVLADLKARDPFVPVIVL SGRGSEELAAATMKAGATRYLTKRGLSLDMLRTAIEASIRWMQHAALSQRK >Mature_130_residues TKVLIVDDSPEDTEMLRRFCSELPSCVIETAASGSEGVARFEKWHADCVLLDYHLADNNGLSVLADLKARDPFVPVIVLS GRGSEELAAATMKAGATRYLTKRGLSLDMLRTAIEASIRWMQHAALSQRK
Specific function: Member Of The Two-Component Regulatory System Zras/Zrar. When Activated By Zras It Acts In Conjunction With Sigma-54 To Regulate The Expression Of Zrap. Positively Autoregulates The Expression Of The Zrasr Operon. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14408; Mature: 14277
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVLIVDDSPEDTEMLRRFCSELPSCVIETAASGSEGVARFEKWHADCVLLDYHLADNN CCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEECCCC GLSVLADLKARDPFVPVIVLSGRGSEELAAATMKAGATRYLTKRGLSLDMLRTAIEASIR CCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHH WMQHAALSQRK HHHHHHHHCCC >Mature Secondary Structure TKVLIVDDSPEDTEMLRRFCSELPSCVIETAASGSEGVARFEKWHADCVLLDYHLADNN CEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCEEEEEEEECCCC GLSVLADLKARDPFVPVIVLSGRGSEELAAATMKAGATRYLTKRGLSLDMLRTAIEASIR CCEEEEECCCCCCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHH WMQHAALSQRK HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA