Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080763

Identifier: 99080763

GI number: 99080763

Start: 983670

End: 984593

Strand: Reverse

Name: 99080763

Synonym: TM1040_0922

Alternate gene names: NA

Gene position: 984593-983670 (Counterclockwise)

Preceding gene: 99080764

Following gene: 99080762

Centisome position: 30.76

GC content: 60.82

Gene sequence:

>924_bases
ATGTTTGATCTTGGTTCCACCCCCGCCATGCCCCGCCCTATTCAACGCAGCGCTTCACTCCGTACACTCGCGCAATCGCC
CGAGTTCTCGCGCGCATTGAACCTGGTTGGACAGACACCGCTGCATCTGGATCGCCTGCAAGACATGCTTGTGCTGCGGC
GCAAATTCTGGGGTGTCGAGGTCGCGATGGTCAACCGCGCAGAATTGCCTAAACCTTTGCGTTTGCTTGAAATTCTTCAA
GAAGAAGGGTTACGGCGGACCCCGGTGCTCCTGTCACCCGAGCATCCTGTGCCCGAACTTGGCCGTCTCGGGGCTTTGCC
GTTGATGACGCCGGCCAGCGTGGGGCTCTTGGATATTCTTGCAGATCGTACAGCGCAGCGGGACCGGCTTGCGCAGAAGT
GGCGCAACCGCCTGTCGCATGCGGAGGCGCAGGCCTTGCGGGTAACGCGACAGAACATGCCGATTGCGCCCGATCACTGG
ATTTTACGCGCCGATGCGGCGCAACAGCAAAAACGTCGTTATCGCAGCTGGCCTGCCGCGCTGACACTGGCTTATGCGCA
AGCAAATCGTGGGTCGGCAAAACTCTTTGAAGCGCATGAGGGGCGTGAGACAGTGGCCGGTATCCTGGTTCTGACCCATG
GTGAAGGCGCGACCTATCATATCGCCCATAGCACGGAGCGCGGGCGCAGGCTCTCCGCGCATAATCTCTTGATGTGGAAT
GCGATGGACTGGCTTGCCGCCAAGGGCATCCGACGATTGGATCTCGGCGTGATCAACACCGAGGACGCAAGTGGGCTTGC
ACGGTTCAAGCTGGGAACAGGCGCACGGCTCTCGCAACTCGGGGGGACATGGCTCTATTGGCCCCCGCTTGGACGCCGCC
TCGCTCCTCTGGCTGCTCTGGATCGTAGGCTGATGGGCGGCTGA

Upstream 100 bases:

>100_bases
TTGTCATGCGCGCGCCAGCGGCGCTGCGCCCGTAGATTTTAACGGTCTTTTTCATGATTTCATTAACCATCAATTAGGTT
TCCATCTTGTTAATGGCGGT

Downstream 100 bases:

>100_bases
TCGCGGCTCCTTTCTGCGTGGTTTAGCATCCTCAGGAGGTGTTATCGAGACCGCATGCATTGTCGAGAACTGACAATGGC
GCGGGACTGGACAGAATGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 307; Mature: 307

Protein sequence:

>307_residues
MFDLGSTPAMPRPIQRSASLRTLAQSPEFSRALNLVGQTPLHLDRLQDMLVLRRKFWGVEVAMVNRAELPKPLRLLEILQ
EEGLRRTPVLLSPEHPVPELGRLGALPLMTPASVGLLDILADRTAQRDRLAQKWRNRLSHAEAQALRVTRQNMPIAPDHW
ILRADAAQQQKRRYRSWPAALTLAYAQANRGSAKLFEAHEGRETVAGILVLTHGEGATYHIAHSTERGRRLSAHNLLMWN
AMDWLAAKGIRRLDLGVINTEDASGLARFKLGTGARLSQLGGTWLYWPPLGRRLAPLAALDRRLMGG

Sequences:

>Translated_307_residues
MFDLGSTPAMPRPIQRSASLRTLAQSPEFSRALNLVGQTPLHLDRLQDMLVLRRKFWGVEVAMVNRAELPKPLRLLEILQ
EEGLRRTPVLLSPEHPVPELGRLGALPLMTPASVGLLDILADRTAQRDRLAQKWRNRLSHAEAQALRVTRQNMPIAPDHW
ILRADAAQQQKRRYRSWPAALTLAYAQANRGSAKLFEAHEGRETVAGILVLTHGEGATYHIAHSTERGRRLSAHNLLMWN
AMDWLAAKGIRRLDLGVINTEDASGLARFKLGTGARLSQLGGTWLYWPPLGRRLAPLAALDRRLMGG
>Mature_307_residues
MFDLGSTPAMPRPIQRSASLRTLAQSPEFSRALNLVGQTPLHLDRLQDMLVLRRKFWGVEVAMVNRAELPKPLRLLEILQ
EEGLRRTPVLLSPEHPVPELGRLGALPLMTPASVGLLDILADRTAQRDRLAQKWRNRLSHAEAQALRVTRQNMPIAPDHW
ILRADAAQQQKRRYRSWPAALTLAYAQANRGSAKLFEAHEGRETVAGILVLTHGEGATYHIAHSTERGRRLSAHNLLMWN
AMDWLAAKGIRRLDLGVINTEDASGLARFKLGTGARLSQLGGTWLYWPPLGRRLAPLAALDRRLMGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34316; Mature: 34316

Theoretical pI: Translated: 11.70; Mature: 11.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDLGSTPAMPRPIQRSASLRTLAQSPEFSRALNLVGQTPLHLDRLQDMLVLRRKFWGVE
CCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEE
VAMVNRAELPKPLRLLEILQEEGLRRTPVLLSPEHPVPELGRLGALPLMTPASVGLLDIL
EEEECHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHH
ADRTAQRDRLAQKWRNRLSHAEAQALRVTRQNMPIAPDHWILRADAAQQQKRRYRSWPAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHCCCHH
LTLAYAQANRGSAKLFEAHEGRETVAGILVLTHGEGATYHIAHSTERGRRLSAHNLLMWN
HEEEHHHCCCCCHHHHHHCCCHHCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEH
AMDWLAAKGIRRLDLGVINTEDASGLARFKLGTGARLSQLGGTWLYWPPLGRRLAPLAAL
HHHHHHHCCCHHHHCEEEECCCCCCEEEEECCCCCHHHHCCCCEEECCCCCCHHHHHHHH
DRRLMGG
HHHHCCC
>Mature Secondary Structure
MFDLGSTPAMPRPIQRSASLRTLAQSPEFSRALNLVGQTPLHLDRLQDMLVLRRKFWGVE
CCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCEE
VAMVNRAELPKPLRLLEILQEEGLRRTPVLLSPEHPVPELGRLGALPLMTPASVGLLDIL
EEEECHHCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCHHHCCCCCCCCCCCHHHHHHHH
ADRTAQRDRLAQKWRNRLSHAEAQALRVTRQNMPIAPDHWILRADAAQQQKRRYRSWPAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHHHHHHCCCHH
LTLAYAQANRGSAKLFEAHEGRETVAGILVLTHGEGATYHIAHSTERGRRLSAHNLLMWN
HEEEHHHCCCCCHHHHHHCCCHHCEEEEEEEECCCCCEEEEEECCCCCCCCCCCCEEEEH
AMDWLAAKGIRRLDLGVINTEDASGLARFKLGTGARLSQLGGTWLYWPPLGRRLAPLAAL
HHHHHHHCCCHHHHCEEEECCCCCCEEEEECCCCCHHHHCCCCEEECCCCCCHHHHHHHH
DRRLMGG
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA