| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080758
Identifier: 99080758
GI number: 99080758
Start: 978666
End: 979214
Strand: Reverse
Name: 99080758
Synonym: TM1040_0917
Alternate gene names: NA
Gene position: 979214-978666 (Counterclockwise)
Preceding gene: 99080762
Following gene: 99080757
Centisome position: 30.59
GC content: 63.21
Gene sequence:
>549_bases GTGAGTTCCACCCCCTCTGAGACCGCCGCCCTGCGGGTTGCCGATCTGCCCCAGAATCGCCCGACGCGATTCACGCTGAC GCCAGAGGCCAAAGCCCTGGTCGGGATCGCCAGCGCACTCGGCGTCGATGCCCTGCGCAAGCTGCGGTTCGAGGGCGAGA TCAAGGCGCGCGGCAAGCGTGACTGGGTTTTGAAGGGCAAACTCGGCTTTACGGTAACGCAGCCGTGCGTGGTCACGCTC GACCCCGTCACCACCCGCATCGACACCGATGTGGAGCGCCTGTTTCTCGCAGAGATCGCCATTCCCGACGAAGCAGAGGT CGAGATGAGCGATGACGACAATATCGACGAGCTGGGCGAATTCATCTCTCCCTATGACGTGATGCTCGAAAGCGTGGCGC TCCATCTGCCGCAATATCCGCGCAAGGAAGGCGCCGAACTGGGCCAGCACATTCACGCCGAACCCGGCACAGCGCCGATG ACGGATGAGGACACCCGCCCCTTTGCCGGGCTTGCAGATTTGCTGAAACCCGGCGACAAGGACTCCTGA
Upstream 100 bases:
>100_bases GGACTTGCAATCATGCGCTTCCCCTGCGGTTCGGGTTGATAAAGACTGAAGTCCCGATTACCTAACTCGAGCTAATGGTT CAAGAAATGAAAGTACGCTC
Downstream 100 bases:
>100_bases GGTCCAGCCGCGCCGCCTCTGCACAGAGGCATGCGCCCCCCGAAAGAGGCAGAATTTTTTCTCGACTCGGGGGCAGGCTG GCATTGACGACCACTGAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MSSTPSETAALRVADLPQNRPTRFTLTPEAKALVGIASALGVDALRKLRFEGEIKARGKRDWVLKGKLGFTVTQPCVVTL DPVTTRIDTDVERLFLAEIAIPDEAEVEMSDDDNIDELGEFISPYDVMLESVALHLPQYPRKEGAELGQHIHAEPGTAPM TDEDTRPFAGLADLLKPGDKDS
Sequences:
>Translated_182_residues MSSTPSETAALRVADLPQNRPTRFTLTPEAKALVGIASALGVDALRKLRFEGEIKARGKRDWVLKGKLGFTVTQPCVVTL DPVTTRIDTDVERLFLAEIAIPDEAEVEMSDDDNIDELGEFISPYDVMLESVALHLPQYPRKEGAELGQHIHAEPGTAPM TDEDTRPFAGLADLLKPGDKDS >Mature_181_residues SSTPSETAALRVADLPQNRPTRFTLTPEAKALVGIASALGVDALRKLRFEGEIKARGKRDWVLKGKLGFTVTQPCVVTLD PVTTRIDTDVERLFLAEIAIPDEAEVEMSDDDNIDELGEFISPYDVMLESVALHLPQYPRKEGAELGQHIHAEPGTAPMT DEDTRPFAGLADLLKPGDKDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19882; Mature: 19750
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTPSETAALRVADLPQNRPTRFTLTPEAKALVGIASALGVDALRKLRFEGEIKARGKR CCCCCCCHHEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC DWVLKGKLGFTVTQPCVVTLDPVTTRIDTDVERLFLAEIAIPDEAEVEMSDDDNIDELGE CEEEECCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHH FISPYDVMLESVALHLPQYPRKEGAELGQHIHAEPGTAPMTDEDTRPFAGLADLLKPGDK HHCHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHCCCCC DS CC >Mature Secondary Structure SSTPSETAALRVADLPQNRPTRFTLTPEAKALVGIASALGVDALRKLRFEGEIKARGKR CCCCCCHHEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC DWVLKGKLGFTVTQPCVVTLDPVTTRIDTDVERLFLAEIAIPDEAEVEMSDDDNIDELGE CEEEECCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHH FISPYDVMLESVALHLPQYPRKEGAELGQHIHAEPGTAPMTDEDTRPFAGLADLLKPGDK HHCHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHCCCCC DS CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA