Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080758

Identifier: 99080758

GI number: 99080758

Start: 978666

End: 979214

Strand: Reverse

Name: 99080758

Synonym: TM1040_0917

Alternate gene names: NA

Gene position: 979214-978666 (Counterclockwise)

Preceding gene: 99080762

Following gene: 99080757

Centisome position: 30.59

GC content: 63.21

Gene sequence:

>549_bases
GTGAGTTCCACCCCCTCTGAGACCGCCGCCCTGCGGGTTGCCGATCTGCCCCAGAATCGCCCGACGCGATTCACGCTGAC
GCCAGAGGCCAAAGCCCTGGTCGGGATCGCCAGCGCACTCGGCGTCGATGCCCTGCGCAAGCTGCGGTTCGAGGGCGAGA
TCAAGGCGCGCGGCAAGCGTGACTGGGTTTTGAAGGGCAAACTCGGCTTTACGGTAACGCAGCCGTGCGTGGTCACGCTC
GACCCCGTCACCACCCGCATCGACACCGATGTGGAGCGCCTGTTTCTCGCAGAGATCGCCATTCCCGACGAAGCAGAGGT
CGAGATGAGCGATGACGACAATATCGACGAGCTGGGCGAATTCATCTCTCCCTATGACGTGATGCTCGAAAGCGTGGCGC
TCCATCTGCCGCAATATCCGCGCAAGGAAGGCGCCGAACTGGGCCAGCACATTCACGCCGAACCCGGCACAGCGCCGATG
ACGGATGAGGACACCCGCCCCTTTGCCGGGCTTGCAGATTTGCTGAAACCCGGCGACAAGGACTCCTGA

Upstream 100 bases:

>100_bases
GGACTTGCAATCATGCGCTTCCCCTGCGGTTCGGGTTGATAAAGACTGAAGTCCCGATTACCTAACTCGAGCTAATGGTT
CAAGAAATGAAAGTACGCTC

Downstream 100 bases:

>100_bases
GGTCCAGCCGCGCCGCCTCTGCACAGAGGCATGCGCCCCCCGAAAGAGGCAGAATTTTTTCTCGACTCGGGGGCAGGCTG
GCATTGACGACCACTGAGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSSTPSETAALRVADLPQNRPTRFTLTPEAKALVGIASALGVDALRKLRFEGEIKARGKRDWVLKGKLGFTVTQPCVVTL
DPVTTRIDTDVERLFLAEIAIPDEAEVEMSDDDNIDELGEFISPYDVMLESVALHLPQYPRKEGAELGQHIHAEPGTAPM
TDEDTRPFAGLADLLKPGDKDS

Sequences:

>Translated_182_residues
MSSTPSETAALRVADLPQNRPTRFTLTPEAKALVGIASALGVDALRKLRFEGEIKARGKRDWVLKGKLGFTVTQPCVVTL
DPVTTRIDTDVERLFLAEIAIPDEAEVEMSDDDNIDELGEFISPYDVMLESVALHLPQYPRKEGAELGQHIHAEPGTAPM
TDEDTRPFAGLADLLKPGDKDS
>Mature_181_residues
SSTPSETAALRVADLPQNRPTRFTLTPEAKALVGIASALGVDALRKLRFEGEIKARGKRDWVLKGKLGFTVTQPCVVTLD
PVTTRIDTDVERLFLAEIAIPDEAEVEMSDDDNIDELGEFISPYDVMLESVALHLPQYPRKEGAELGQHIHAEPGTAPMT
DEDTRPFAGLADLLKPGDKDS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19882; Mature: 19750

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTPSETAALRVADLPQNRPTRFTLTPEAKALVGIASALGVDALRKLRFEGEIKARGKR
CCCCCCCHHEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC
DWVLKGKLGFTVTQPCVVTLDPVTTRIDTDVERLFLAEIAIPDEAEVEMSDDDNIDELGE
CEEEECCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHH
FISPYDVMLESVALHLPQYPRKEGAELGQHIHAEPGTAPMTDEDTRPFAGLADLLKPGDK
HHCHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHCCCCC
DS
CC
>Mature Secondary Structure 
SSTPSETAALRVADLPQNRPTRFTLTPEAKALVGIASALGVDALRKLRFEGEIKARGKR
CCCCCCHHEEEEECCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC
DWVLKGKLGFTVTQPCVVTLDPVTTRIDTDVERLFLAEIAIPDEAEVEMSDDDNIDELGE
CEEEECCCCCEECCCEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCCCHHHHHH
FISPYDVMLESVALHLPQYPRKEGAELGQHIHAEPGTAPMTDEDTRPFAGLADLLKPGDK
HHCHHHHHHHHHHHHCCCCCCHHHHHHHHEECCCCCCCCCCCCCCCCHHHHHHHHCCCCC
DS
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA