Click here to switch to the map view.

The map label for this gene is yiaN [C]

Identifier: 99080721

GI number: 99080721

Start: 938924

End: 941278

Strand: Direct

Name: yiaN [C]

Synonym: TM1040_0880

Alternate gene names: 99080721

Gene position: 938924-941278 (Clockwise)

Preceding gene: 99080720

Following gene: 99080726

Centisome position: 29.33

GC content: 60.76

Gene sequence:

>2355_bases
ATGCTATTCGGACTTGATGGCGTCGAAATCGGCCTAATCATCGTCTTTCTCTGCCTCTTCGGGGGCATTCTCTCGGGCTT
TCCGGTGGCCTTTGCCATCGGGGGCGCCGGGGTCATCTCCTTCGGGATCATTGCCGCGCTCGACAGTGCGGGGCTTCTGA
TTCACCAGGCCATTGACACCTCCAGTCAGGCCTATCGAGATATCGTCAGCTCCGGCGTGAAGCCGGATGTGATTTCCGTA
TTCCGATACCCGGACTTGCCAAGGATCGCAGAGCCTGTGTTCCCGCAGGGCTGGGAAGTTGCGATGGACCGCAACGTCTC
CTTCATCGTGAACCGGATCAACGAGCGGGTTCTGGCCGGCGCCTCCATCGAGACGCTGCTGGCAGTGCTGATGTTCGTTC
TGATGGGCATCACGCTTGAACGCTCCAAGATCGCAAACGATCTTCTGACCACCATGGCGCGTGTCTTTGGCCCGCTGCCG
GGCGGTCTGGCTGTGTCCATCGTGGTTGTGGGCGCGTTTCTTGCGGCGTCCACCGGGATCGTGGGCGCAACGGTTGTGAC
CATGGGGCTTCTGGCCCTGCCGACCATGCTGCGCAACAACTACTCGCCGGAACTGGCGACAGGTGTGATTGCAGCCTCGG
GGACGCTTGGTCAGATCATTCCGCCCTCGATCGTGATCGTTCTTCTGGGCACGCTCGCAGGGGATCTCTACTCCACCGCG
CAGGAAAACCGGGCGCAGGAAGCGGGCTGTACGGATGCGCTGACGTATCTTGGCGAGCCTGCGGTTGTGTCCGTGGGCAC
ATTGTTCCAGGCGGCCTTGTTGCCGGGCATCATGCTTGCGCTTCTCTATGCGCTCTATGCCTTTGGCTACGCGCTCCTTA
ATCCGCACAAGGCTCCTGCCGTGCAGATGGGTGCTGCCAATGAAGAGCCGATCACCCGCGCAGAAAGCCTCACATGGTTC
CTCGGCGTTCCGGCGGCTCTGATCGTTGGCACGGTGCTCTTGAACAGCGTGAACCTCGTGGGCAGCCAGAACATCACCGT
TTCGGCCTTCTCTGATGCGGGGCAAACCGCAAGCCTGCGCACCAACGTGGGCCCGGAGTGTCAGGCGGCGATGATTGACC
TGCATGGTCAAGAAGCCTGGGATGCCGCCGTGGCTGAGCAGGTCGAGATCGATGCGGCGGGCGGCGTGGCTGAAGCCACC
AAGCTTTCTGAAGAAGAGCTGGCCCAGGCGCTGGAGCAGAAGATCGCCAATGCGGCGCCCATCGGCACCGGTATTGCGAC
CATCATCGTGCTTCTGGGGCTGACGCTGGCCGTGGGCCGGGGCGTGGCGCCGTCGCGTGATGCCAAGCCGTTGATCGTTG
GTGCCATTGGTCTGTTGCTGCTGGCGCTGATTGATGTGATCGCGATTGGACCCACCACCTCGGCCTCGGCCACGGTGGCG
TGGATGCTGCTGCCTGTCCTGCTTGCGCTTTATGGCTGCAAGGAAGCGGCGGCGCGCTGTGCCCGCAACGATCTGATCCG
GGTGGTCTTCCCGCCGCTGGTTCTGATCGTGGCGGTGCTGGGCTCGATCCTGGGTGGGATCACCAACCCGACGCCCGCTG
CGGCGCTTGGGGCCGGTGGCGCCATCATGCTCGCGGCCTACCGTCGCCTGAAGGATGAGGGTCAATCCGGCAATATCATC
ATCTGGGCCACCTTCGCGGTGATCCTGGCGATCCTCACCGGTATGAACTTTGACCTTCGGATCAATCAGGACGTGGTTCC
CGCAGAAAGCTACGCGGCATTCTTCTTTGCCTATTCGTGCTATCTGTTTGCGCTCTTTGGCCTGCTCTACGGGATCTGGG
TGCTCTTCAAAGGCGGGGTGATGACACCGATCGTGCGGGAAACCGCCAAGGTGACGTCGATGGTCTTTACCATCCTCATC
GGCTCGCAGCTGCTGAACCTGGTGGTGATCTCCTTTGGGGGCGAGCACTATATCCAGCAGTTCCTGAAGAGCTTTGACAA
TGAGCTCACCGTGTTCCTCATCGTGATGCTGGTGCTGTTCATCCTCGGGTTTGTGCTCGACTTCCTGGAGATCATCTACA
TCGTGATCCCCATTGTCGGCCCGGTGATCTATGGCGGATCTTTTGATCCCAAATGGGTGACGATCATGGTGGCTGTGAAC
CTGCAGACGTCCTTCCTCACGCCGCCCTTTGGCTTTGCGCTATTCTATCTGCGCGGCGTGGCGCCGAGGGAGGTCACGAC
TGGCCATATCTACCGTGGTGTGTTGCCCTTCGTGTTGATCCAGGTGCTTGGGCTGGCGATCCTGTGGTTCTTCCCCTCGA
TCGTGACCATTGTACCGTCGCTGATCCCGAACTGA

Upstream 100 bases:

>100_bases
ATCGAAGGCGAAGAGTCGGAAGGGAAATACCTCGACAAAGATACGCTTGGCGAAGGCGAAGAAGCCTATGAAGGCGCTCA
TTAACTAAGGGACAGCACCC

Downstream 100 bases:

>100_bases
TCGCGCAGAAGGTTCCAAAAGAGAAAAGGCCCCGCCATTGTGTGCGGGGCCTTTTTTAATTGTGCCGAGAGAGAAAGGGG
CGCTGCCCCTCTTGGCCTGC

Product: TRAP C4-dicarboxylate transport system permease DctM subunit

Products: NA

Alternate protein names: Trap Dicarboxylate Transporter Dctm Subunit; TRAP Dicarboxylate Transporter Subunit DctM; TRAP Transporter DctM-Like Membrane Protein; TRAP Dicarboxylate Transporter- DctM Subunit; TRAP Transporter DctM Subunit; TRAP Transporter DctM Subunit Subfamily; TRAP Transporter Large Transmembrane Protein; TRAP Dicarboxylate Transporter; C4-Dicarboxylate Transporter Family Protein DctM Subunit; TRAP Mannitol/C4-Dicarboxylate Transporter; C4 Dicarboxylate ABC Transporter Permease; Trap Dicarboxylate Transporter- Dctm Subunit; Tripartite Transporter Large Subunit; TRAP C4-Dicarboxylate Transporter Permease DctM Subunit; C4-Dicarboxylate Transporter; TRAP-T Family Tripartite Transporter; C4 Dicarboxylate Transporter Permease; Mannitol Transporter; C4-Dicarboxylate Transporter Permease; Permease Component Of C4 Dicarboxylate Transporter; C4-Dicarboxylate Transporter Large Subunit; Trap-Type Transport System Large Permease Component; TRAP-Type Transporter Large Permease Component; TRAP Transporter DctM-Like Subunit Family Protein; TRAP-Type Transport System Large Permease Component; TRAP Dicarboxylate Transporter DctM Subunit Protein; TRAP Transporter; TRAP-Type Large Permease Component; Large Permease Of TRAP-Type Transporter; TRAP C4-Dicarboxylate Transport System PermeaseDctM Subunit; TRAP Family Transmembrane Transporter Protein; TRAP C4-Dicarboxylate Transport System Permease; TRAP Transporter DctM Family Protein; DctM-Like Transporter Family Protein; TRAP Transporter DctM Related Transmembrane Protein

Number of amino acids: Translated: 784; Mature: 784

Protein sequence:

>784_residues
MLFGLDGVEIGLIIVFLCLFGGILSGFPVAFAIGGAGVISFGIIAALDSAGLLIHQAIDTSSQAYRDIVSSGVKPDVISV
FRYPDLPRIAEPVFPQGWEVAMDRNVSFIVNRINERVLAGASIETLLAVLMFVLMGITLERSKIANDLLTTMARVFGPLP
GGLAVSIVVVGAFLAASTGIVGATVVTMGLLALPTMLRNNYSPELATGVIAASGTLGQIIPPSIVIVLLGTLAGDLYSTA
QENRAQEAGCTDALTYLGEPAVVSVGTLFQAALLPGIMLALLYALYAFGYALLNPHKAPAVQMGAANEEPITRAESLTWF
LGVPAALIVGTVLLNSVNLVGSQNITVSAFSDAGQTASLRTNVGPECQAAMIDLHGQEAWDAAVAEQVEIDAAGGVAEAT
KLSEEELAQALEQKIANAAPIGTGIATIIVLLGLTLAVGRGVAPSRDAKPLIVGAIGLLLLALIDVIAIGPTTSASATVA
WMLLPVLLALYGCKEAAARCARNDLIRVVFPPLVLIVAVLGSILGGITNPTPAAALGAGGAIMLAAYRRLKDEGQSGNII
IWATFAVILAILTGMNFDLRINQDVVPAESYAAFFFAYSCYLFALFGLLYGIWVLFKGGVMTPIVRETAKVTSMVFTILI
GSQLLNLVVISFGGEHYIQQFLKSFDNELTVFLIVMLVLFILGFVLDFLEIIYIVIPIVGPVIYGGSFDPKWVTIMVAVN
LQTSFLTPPFGFALFYLRGVAPREVTTGHIYRGVLPFVLIQVLGLAILWFFPSIVTIVPSLIPN

Sequences:

>Translated_784_residues
MLFGLDGVEIGLIIVFLCLFGGILSGFPVAFAIGGAGVISFGIIAALDSAGLLIHQAIDTSSQAYRDIVSSGVKPDVISV
FRYPDLPRIAEPVFPQGWEVAMDRNVSFIVNRINERVLAGASIETLLAVLMFVLMGITLERSKIANDLLTTMARVFGPLP
GGLAVSIVVVGAFLAASTGIVGATVVTMGLLALPTMLRNNYSPELATGVIAASGTLGQIIPPSIVIVLLGTLAGDLYSTA
QENRAQEAGCTDALTYLGEPAVVSVGTLFQAALLPGIMLALLYALYAFGYALLNPHKAPAVQMGAANEEPITRAESLTWF
LGVPAALIVGTVLLNSVNLVGSQNITVSAFSDAGQTASLRTNVGPECQAAMIDLHGQEAWDAAVAEQVEIDAAGGVAEAT
KLSEEELAQALEQKIANAAPIGTGIATIIVLLGLTLAVGRGVAPSRDAKPLIVGAIGLLLLALIDVIAIGPTTSASATVA
WMLLPVLLALYGCKEAAARCARNDLIRVVFPPLVLIVAVLGSILGGITNPTPAAALGAGGAIMLAAYRRLKDEGQSGNII
IWATFAVILAILTGMNFDLRINQDVVPAESYAAFFFAYSCYLFALFGLLYGIWVLFKGGVMTPIVRETAKVTSMVFTILI
GSQLLNLVVISFGGEHYIQQFLKSFDNELTVFLIVMLVLFILGFVLDFLEIIYIVIPIVGPVIYGGSFDPKWVTIMVAVN
LQTSFLTPPFGFALFYLRGVAPREVTTGHIYRGVLPFVLIQVLGLAILWFFPSIVTIVPSLIPN
>Mature_784_residues
MLFGLDGVEIGLIIVFLCLFGGILSGFPVAFAIGGAGVISFGIIAALDSAGLLIHQAIDTSSQAYRDIVSSGVKPDVISV
FRYPDLPRIAEPVFPQGWEVAMDRNVSFIVNRINERVLAGASIETLLAVLMFVLMGITLERSKIANDLLTTMARVFGPLP
GGLAVSIVVVGAFLAASTGIVGATVVTMGLLALPTMLRNNYSPELATGVIAASGTLGQIIPPSIVIVLLGTLAGDLYSTA
QENRAQEAGCTDALTYLGEPAVVSVGTLFQAALLPGIMLALLYALYAFGYALLNPHKAPAVQMGAANEEPITRAESLTWF
LGVPAALIVGTVLLNSVNLVGSQNITVSAFSDAGQTASLRTNVGPECQAAMIDLHGQEAWDAAVAEQVEIDAAGGVAEAT
KLSEEELAQALEQKIANAAPIGTGIATIIVLLGLTLAVGRGVAPSRDAKPLIVGAIGLLLLALIDVIAIGPTTSASATVA
WMLLPVLLALYGCKEAAARCARNDLIRVVFPPLVLIVAVLGSILGGITNPTPAAALGAGGAIMLAAYRRLKDEGQSGNII
IWATFAVILAILTGMNFDLRINQDVVPAESYAAFFFAYSCYLFALFGLLYGIWVLFKGGVMTPIVRETAKVTSMVFTILI
GSQLLNLVVISFGGEHYIQQFLKSFDNELTVFLIVMLVLFILGFVLDFLEIIYIVIPIVGPVIYGGSFDPKWVTIMVAVN
LQTSFLTPPFGFALFYLRGVAPREVTTGHIYRGVLPFVLIQVLGLAILWFFPSIVTIVPSLIPN

Specific function: Unknown

COG id: COG4664

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, large permease component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 82506; Mature: 82506

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFGLDGVEIGLIIVFLCLFGGILSGFPVAFAIGGAGVISFGIIAALDSAGLLIHQAIDT
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCC
SSQAYRDIVSSGVKPDVISVFRYPDLPRIAEPVFPQGWEVAMDRNVSFIVNRINERVLAG
CHHHHHHHHHCCCCCCHHHHHCCCCCCHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHCC
ASIETLLAVLMFVLMGITLERSKIANDLLTTMARVFGPLPGGLAVSIVVVGAFLAASTGI
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCH
VGATVVTMGLLALPTMLRNNYSPELATGVIAASGTLGQIIPPSIVIVLLGTLAGDLYSTA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QENRAQEAGCTDALTYLGEPAVVSVGTLFQAALLPGIMLALLYALYAFGYALLNPHKAPA
HHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VQMGAANEEPITRAESLTWFLGVPAALIVGTVLLNSVNLVGSQNITVSAFSDAGQTASLR
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEE
TNVGPECQAAMIDLHGQEAWDAAVAEQVEIDAAGGVAEATKLSEEELAQALEQKIANAAP
CCCCCCHHHHHHCCCCCHHHHHHHHHHHEECCCCCHHHHHHCCHHHHHHHHHHHHHCCCC
IGTGIATIIVLLGLTLAVGRGVAPSRDAKPLIVGAIGLLLLALIDVIAIGPTTSASATVA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
WMLLPVLLALYGCKEAAARCARNDLIRVVFPPLVLIVAVLGSILGGITNPTPAAALGAGG
HHHHHHHHHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCH
AIMLAAYRRLKDEGQSGNIIIWATFAVILAILTGMNFDLRINQDVVPAESYAAFFFAYSC
HHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH
YLFALFGLLYGIWVLFKGGVMTPIVRETAKVTSMVFTILIGSQLLNLVVISFGGEHYIQQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FLKSFDNELTVFLIVMLVLFILGFVLDFLEIIYIVIPIVGPVIYGGSFDPKWVTIMVAVN
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
LQTSFLTPPFGFALFYLRGVAPREVTTGHIYRGVLPFVLIQVLGLAILWFFPSIVTIVPS
CCHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPN
HCCC
>Mature Secondary Structure
MLFGLDGVEIGLIIVFLCLFGGILSGFPVAFAIGGAGVISFGIIAALDSAGLLIHQAIDT
CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCC
SSQAYRDIVSSGVKPDVISVFRYPDLPRIAEPVFPQGWEVAMDRNVSFIVNRINERVLAG
CHHHHHHHHHCCCCCCHHHHHCCCCCCHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHCC
ASIETLLAVLMFVLMGITLERSKIANDLLTTMARVFGPLPGGLAVSIVVVGAFLAASTGI
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCH
VGATVVTMGLLALPTMLRNNYSPELATGVIAASGTLGQIIPPSIVIVLLGTLAGDLYSTA
HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
QENRAQEAGCTDALTYLGEPAVVSVGTLFQAALLPGIMLALLYALYAFGYALLNPHKAPA
HHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
VQMGAANEEPITRAESLTWFLGVPAALIVGTVLLNSVNLVGSQNITVSAFSDAGQTASLR
EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEE
TNVGPECQAAMIDLHGQEAWDAAVAEQVEIDAAGGVAEATKLSEEELAQALEQKIANAAP
CCCCCCHHHHHHCCCCCHHHHHHHHHHHEECCCCCHHHHHHCCHHHHHHHHHHHHHCCCC
IGTGIATIIVLLGLTLAVGRGVAPSRDAKPLIVGAIGLLLLALIDVIAIGPTTSASATVA
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
WMLLPVLLALYGCKEAAARCARNDLIRVVFPPLVLIVAVLGSILGGITNPTPAAALGAGG
HHHHHHHHHHHCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCH
AIMLAAYRRLKDEGQSGNIIIWATFAVILAILTGMNFDLRINQDVVPAESYAAFFFAYSC
HHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHH
YLFALFGLLYGIWVLFKGGVMTPIVRETAKVTSMVFTILIGSQLLNLVVISFGGEHYIQQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
FLKSFDNELTVFLIVMLVLFILGFVLDFLEIIYIVIPIVGPVIYGGSFDPKWVTIMVAVN
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEE
LQTSFLTPPFGFALFYLRGVAPREVTTGHIYRGVLPFVLIQVLGLAILWFFPSIVTIVPS
CCHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIPN
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA