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The map label for this gene is 99080720

Identifier: 99080720

GI number: 99080720

Start: 937960

End: 938907

Strand: Direct

Name: 99080720

Synonym: TM1040_0879

Alternate gene names: NA

Gene position: 937960-938907 (Clockwise)

Preceding gene: 99080719

Following gene: 99080721

Centisome position: 29.3

GC content: 56.54

Gene sequence:

>948_bases
ATGCAGGACGACATGAGTATTTCCTTTTTTGGCGCGATTGGTGGCTTCCTTTGGTGGCTCGCCTCAAACGTATTTGGCGC
CTTTTATAACATCGGCTATGCCGTCACCCATCCCGAGCTGTGGCTCGACTGGCTGACATGGGCCGGCACACCAGAGGACA
AGGCATCGGTGATGCGCTTTGTCTACTATGGTGGTTCGGTCGAGTTCTTCTTTGTGGTCTTCACCACACTCCTCGTCCTC
ACGGGGCTCGGCATCTATTACCGTGGCTTCATGTGGGGGATGGTGCGCGGGCTTGAGGGCTTTGCCAACACCTTGGGGCG
CTTCTTTGCCTGGGCCGGTCTCTTGATGGTCCTGCAGCAGATCATCATCGTGTTCATGCAGCGCGTCTTTGCCCGCCCCG
ATATGAGTTTCGGGCTCGGCATCGCGCTGGAAAAGGACATCTCGTGGTTCGCAGAAGAGCTGAAGCTCTATAACGCGCTC
GTGGTGTGTTTCTGTGTCACCTACACCTTTGTGCAGGGCGGCCATGTGCGCGTTGACCTGATCTATGCGGGCATCTCGCA
TCGCGCCAAACGCGTGGTCGACATGGTTGGGTCGCTGATCTTCATGATGCCCATGGCGGTGATCACCTGGATGTACGGAT
GGTACTTCCTGTGGCGTCACCTGATCGTGCCAAAACCCTCCGCCTCCGACCAACTGGATCGTCTGGTCATGAAAGCGCGC
GCCTTGCGCTGGAACGTGGAGACCATCGGCTTCTCGCCCAACGGCTTTAACGGCTATTTCCTCTTCAAGATCCTGCTGGT
CGCATTTGCGGGCCTCGTGTTCCTGCATGCGGTGGCGTTCTTCTACCGCTCTCTCCTCGAATATATCGAAGGCGAAGAGT
CGGAAGGGAAATACCTCGACAAAGATACGCTTGGCGAAGGCGAAGAAGCCTATGAAGGCGCTCATTAA

Upstream 100 bases:

>100_bases
GATGCGGGGGATCTCTTTTGCACTCGCGGTCCAACGAGCGTCGCCGGAGCCTTCCGCGCAAAGACGTGCCCGACCGCCTG
CTTGAACTTCCGGGGGAGCC

Downstream 100 bases:

>100_bases
CTAAGGGACAGCACCCATGCTATTCGGACTTGATGGCGTCGAAATCGGCCTAATCATCGTCTTTCTCTGCCTCTTCGGGG
GCATTCTCTCGGGCTTTCCG

Product: TRAP-type mannitol/chloroaromatic compound transport system small permease component-like

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MQDDMSISFFGAIGGFLWWLASNVFGAFYNIGYAVTHPELWLDWLTWAGTPEDKASVMRFVYYGGSVEFFFVVFTTLLVL
TGLGIYYRGFMWGMVRGLEGFANTLGRFFAWAGLLMVLQQIIIVFMQRVFARPDMSFGLGIALEKDISWFAEELKLYNAL
VVCFCVTYTFVQGGHVRVDLIYAGISHRAKRVVDMVGSLIFMMPMAVITWMYGWYFLWRHLIVPKPSASDQLDRLVMKAR
ALRWNVETIGFSPNGFNGYFLFKILLVAFAGLVFLHAVAFFYRSLLEYIEGEESEGKYLDKDTLGEGEEAYEGAH

Sequences:

>Translated_315_residues
MQDDMSISFFGAIGGFLWWLASNVFGAFYNIGYAVTHPELWLDWLTWAGTPEDKASVMRFVYYGGSVEFFFVVFTTLLVL
TGLGIYYRGFMWGMVRGLEGFANTLGRFFAWAGLLMVLQQIIIVFMQRVFARPDMSFGLGIALEKDISWFAEELKLYNAL
VVCFCVTYTFVQGGHVRVDLIYAGISHRAKRVVDMVGSLIFMMPMAVITWMYGWYFLWRHLIVPKPSASDQLDRLVMKAR
ALRWNVETIGFSPNGFNGYFLFKILLVAFAGLVFLHAVAFFYRSLLEYIEGEESEGKYLDKDTLGEGEEAYEGAH
>Mature_315_residues
MQDDMSISFFGAIGGFLWWLASNVFGAFYNIGYAVTHPELWLDWLTWAGTPEDKASVMRFVYYGGSVEFFFVVFTTLLVL
TGLGIYYRGFMWGMVRGLEGFANTLGRFFAWAGLLMVLQQIIIVFMQRVFARPDMSFGLGIALEKDISWFAEELKLYNAL
VVCFCVTYTFVQGGHVRVDLIYAGISHRAKRVVDMVGSLIFMMPMAVITWMYGWYFLWRHLIVPKPSASDQLDRLVMKAR
ALRWNVETIGFSPNGFNGYFLFKILLVAFAGLVFLHAVAFFYRSLLEYIEGEESEGKYLDKDTLGEGEEAYEGAH

Specific function: Unknown

COG id: COG4665

COG function: function code Q; TRAP-type mannitol/chloroaromatic compound transport system, small permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36003; Mature: 36003

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCCHHHCCCCC
>Mature Secondary Structure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CCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA