Definition | Ruegeria sp. TM1040, complete genome. |
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Accession | NC_008044 |
Length | 3,200,938 |
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The map label for this gene is ilvH [H]
Identifier: 99080715
GI number: 99080715
Start: 931317
End: 931877
Strand: Reverse
Name: ilvH [H]
Synonym: TM1040_0874
Alternate gene names: 99080715
Gene position: 931877-931317 (Counterclockwise)
Preceding gene: 99080716
Following gene: 99080713
Centisome position: 29.11
GC content: 59.71
Gene sequence:
>561_bases ATGTCTGCCCTACACATCAAAAAAGGTGCTACCAAGCACTCCGCCTATAACCTACGCCCGAATTTCTCCGACACGCAGGA GCGCCATACGATCACCGTTCTGGTGGAAAACGAACCTGGCGTGCTGGCGCGCGTCATCGGGCTGTTTTCGGGCCGCGGTT ACAACATCGACAGCCTCACCGTGGCCGAAGTAGACCACACCGGGCATCTGTCGCGCATCACTGTGGTCACCACTGGTACG CCACAGGTGATCGAACAGATCAAAGCGCAGCTTGGTCGCATCGTGCCCGTACATGAGGTCACCGACCTCACCGTGGCCGG CCCCTTTGTGGAGCGTGAACTGGCCATCGTCAAAGTGGTCGGCGAAGGCGAAAAGCGCGTCGAGGCGATGCGCCTTGCGG ATATTTTCCGCGCAAAGGTCGTGGATACGACGCTCAACAGCTTCATCTTTGAAATCACCGGCACGCCCGACAAGATCGAC GCCTTTGCCGATCTGATGCGCCCGCTTGGCATGACCAAGATCGCGCGTACCGGGGTTGCGGCGCTGTTGCGCGGCGAGTG A
Upstream 100 bases:
>100_bases GCGTGATCCAGTCCGGCGGCGCGGTTCTGGTCTGATCATCTGAGGTTTGATTGCAAGGCGTATCGCGCCTTGCCCCGATA TTTCGAGGAAAGGGACTGAC
Downstream 100 bases:
>100_bases CGCGCCTTAGTACCAGCCAGTAACGCCAAAGCGCACCTGCGGGTGCGCTTTTTTGTCTTTGGGTCGGTCTTGAGACATGT CAGGAGGGCTGGGCGGCCCC
Product: acetolactate synthase 3 regulatory subunit
Products: NA
Alternate protein names: Acetohydroxy-acid synthase small subunit; AHAS; ALS [H]
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSALHIKKGATKHSAYNLRPNFSDTQERHTITVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGHLSRITVVTTGT PQVIEQIKAQLGRIVPVHEVTDLTVAGPFVERELAIVKVVGEGEKRVEAMRLADIFRAKVVDTTLNSFIFEITGTPDKID AFADLMRPLGMTKIARTGVAALLRGE
Sequences:
>Translated_186_residues MSALHIKKGATKHSAYNLRPNFSDTQERHTITVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGHLSRITVVTTGT PQVIEQIKAQLGRIVPVHEVTDLTVAGPFVERELAIVKVVGEGEKRVEAMRLADIFRAKVVDTTLNSFIFEITGTPDKID AFADLMRPLGMTKIARTGVAALLRGE >Mature_185_residues SALHIKKGATKHSAYNLRPNFSDTQERHTITVLVENEPGVLARVIGLFSGRGYNIDSLTVAEVDHTGHLSRITVVTTGTP QVIEQIKAQLGRIVPVHEVTDLTVAGPFVERELAIVKVVGEGEKRVEAMRLADIFRAKVVDTTLNSFIFEITGTPDKIDA FADLMRPLGMTKIARTGVAALLRGE
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0440
COG function: function code E; Acetolactate synthase, small (regulatory) subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ACT domain [H]
Homologues:
Organism=Escherichia coli, GI1786266, Length=160, Percent_Identity=45, Blast_Score=127, Evalue=5e-31, Organism=Saccharomyces cerevisiae, GI6319837, Length=208, Percent_Identity=30.7692307692308, Blast_Score=94, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004789 - InterPro: IPR019455 - InterPro: IPR002912 [H]
Pfam domain/function: PF01842 ACT; PF10369 ALS_ss_C [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 20283; Mature: 20152
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALHIKKGATKHSAYNLRPNFSDTQERHTITVLVENEPGVLARVIGLFSGRGYNIDSLT CCCEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCEE VAEVDHTGHLSRITVVTTGTPQVIEQIKAQLGRIVPVHEVTDLTVAGPFVERELAIVKVV EEEECCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCHHCCCEEEECCHHHHCEEEEEEE GEGEKRVEAMRLADIFRAKVVDTTLNSFIFEITGTPDKIDAFADLMRPLGMTKIARTGVA CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHH ALLRGE HHCCCC >Mature Secondary Structure SALHIKKGATKHSAYNLRPNFSDTQERHTITVLVENEPGVLARVIGLFSGRGYNIDSLT CCEECCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCCCCCCEE VAEVDHTGHLSRITVVTTGTPQVIEQIKAQLGRIVPVHEVTDLTVAGPFVERELAIVKVV EEEECCCCCEEEEEEEECCCHHHHHHHHHHHCCCCCCHHCCCEEEECCHHHHCEEEEEEE GEGEKRVEAMRLADIFRAKVVDTTLNSFIFEITGTPDKIDAFADLMRPLGMTKIARTGVA CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHH ALLRGE HHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]