Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080710

Identifier: 99080710

GI number: 99080710

Start: 926009

End: 927346

Strand: Reverse

Name: 99080710

Synonym: TM1040_0869

Alternate gene names: NA

Gene position: 927346-926009 (Counterclockwise)

Preceding gene: 99080713

Following gene: 99080705

Centisome position: 28.97

GC content: 62.86

Gene sequence:

>1338_bases
ATGAAATGCGCCATTGCGCCCGACGGTGCAACGGCGGATGCTGTGGCGATGACCCACGACATTGCATTCACCTTTGAGAC
CCTGCCCGAGGCGGCGCGCCGGCATATTCGCGTGTTTCAGATCCATCAGTTTCTGGACCGCTTTGCCATGGGGCTCACGG
TGGCGGTGGTTGCGCTTGCGCTTACGGATCGGGGTATGGACCTGTTCCAGATCTCGCTGCTTTTTGGGATCTACTCGCTG
ACGACCATGACGACGGAACTTCCGTTTGGCGGCTTGGCCGACAGTATCGGGCGCAAGCCCGTGTTTCTCGGGGCTGTGGG
CGCCAGTTTGATGGCGCTGGCCCTGTTTCTGCTGTCGCGCGATTTTGCTGTGCTGGCGATGTCCTTCGCCTTTGTCGGCG
TGGGGCGGGCCTTGCGGTCTGGCACGCTTGATGCGTGGTTTGTTGAGGGGTTCAGGGCCCATGCCCCCGACGTGGATGTG
CAGCCCGCACTGGCCAAGGCGCAATGGGCCAATGCGATGGGGCTTGCCGTGGGGGCGGTTATGGGTGGTCTGTTGCCGGA
CGCCGTTGGCACCCTTGGCATCAGGTATGGGATCAGCATTTATGATGTGTCCTACGCGGCAAGCTTTGCCGTCATGGTCG
GCGTGTTTGCCTACACGCTTCGCGTCATCATTGAGCCACCGCGCCCACGAGATGCGCGGGCGCTCCAGCAGGGCTTTGTA
CGCGTGCCTGCGGTGATTGCAGAGGCCGGCGCCCTGGCGCTGAAGCATCCGGTGCTCTCGCTGCTGTTGACGGCTTTGGC
GCTGTTCCTGATGGCGACCAACCCGGTCGAGGTGCTCTGGCCGACCTATGCCAAACCAATGCTGGACGCGGACTATGCCA
ACACCCTCATTGGGGCACTGACGGCGGGGTACTTCTTTGCGATCGCCATTGGCGCGGGGATATCGCCCCGGATCAGTCGA
CTGTTCAGGCGGCGCTCTGCGGTCGTGCTGGCCGCGCTTTTTGCCTGTCTTGCGGCTGCGCAGGTCGTCCTTGCGATCCA
AGGCAGTGTCGCTGGTTTTGTCTGCATGTTTCTGATCTACGCGGTCCTGCTGGGCGCAAGCGAGACACCCGCAAGCAGCC
TGTTGCACGCGTGTGTGGCGGACCGTCAGCGCTCCACCATGCTGTCGCTGCGCTCTTTGATCCAGCAGCTTGGGGCGGCG
GTTGGGCTGCTAATGGCTGGAGGCCTTGCTGAGATCTACACGACCTCGCTCGCCTGGATCATTGGGGCGGTGTTCCTGCT
GATTGCGGTGGGGCTGTGCCTGATCTTGGCCAAACGCCTCGCGGGTTCCGGGCGCTAG

Upstream 100 bases:

>100_bases
AGCCTAGGCTGCGGATAACGGTCTGAAAAGACCCTAAAATTCCGCACCTTTTTCATGCGCATCAAGGACAGCGCCCGACA
CCACCCAAGAGCGCCCACGC

Downstream 100 bases:

>100_bases
CGCATCCGCGTCGGGGTGACGTCCAAAACCCGCCCCCAATCCCAGACAAAAAACCCCTGACCAAACGGTCAGGGGCCTTG
TTCAACGAATGATCTTTGTG

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Transporter; Transporter Facilitator Family; Facilitator Superfamily Transporter; Facilitator Superfamily Transporter Permease; Facilitator Superfamily Permease

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MKCAIAPDGATADAVAMTHDIAFTFETLPEAARRHIRVFQIHQFLDRFAMGLTVAVVALALTDRGMDLFQISLLFGIYSL
TTMTTELPFGGLADSIGRKPVFLGAVGASLMALALFLLSRDFAVLAMSFAFVGVGRALRSGTLDAWFVEGFRAHAPDVDV
QPALAKAQWANAMGLAVGAVMGGLLPDAVGTLGIRYGISIYDVSYAASFAVMVGVFAYTLRVIIEPPRPRDARALQQGFV
RVPAVIAEAGALALKHPVLSLLLTALALFLMATNPVEVLWPTYAKPMLDADYANTLIGALTAGYFFAIAIGAGISPRISR
LFRRRSAVVLAALFACLAAAQVVLAIQGSVAGFVCMFLIYAVLLGASETPASSLLHACVADRQRSTMLSLRSLIQQLGAA
VGLLMAGGLAEIYTTSLAWIIGAVFLLIAVGLCLILAKRLAGSGR

Sequences:

>Translated_445_residues
MKCAIAPDGATADAVAMTHDIAFTFETLPEAARRHIRVFQIHQFLDRFAMGLTVAVVALALTDRGMDLFQISLLFGIYSL
TTMTTELPFGGLADSIGRKPVFLGAVGASLMALALFLLSRDFAVLAMSFAFVGVGRALRSGTLDAWFVEGFRAHAPDVDV
QPALAKAQWANAMGLAVGAVMGGLLPDAVGTLGIRYGISIYDVSYAASFAVMVGVFAYTLRVIIEPPRPRDARALQQGFV
RVPAVIAEAGALALKHPVLSLLLTALALFLMATNPVEVLWPTYAKPMLDADYANTLIGALTAGYFFAIAIGAGISPRISR
LFRRRSAVVLAALFACLAAAQVVLAIQGSVAGFVCMFLIYAVLLGASETPASSLLHACVADRQRSTMLSLRSLIQQLGAA
VGLLMAGGLAEIYTTSLAWIIGAVFLLIAVGLCLILAKRLAGSGR
>Mature_445_residues
MKCAIAPDGATADAVAMTHDIAFTFETLPEAARRHIRVFQIHQFLDRFAMGLTVAVVALALTDRGMDLFQISLLFGIYSL
TTMTTELPFGGLADSIGRKPVFLGAVGASLMALALFLLSRDFAVLAMSFAFVGVGRALRSGTLDAWFVEGFRAHAPDVDV
QPALAKAQWANAMGLAVGAVMGGLLPDAVGTLGIRYGISIYDVSYAASFAVMVGVFAYTLRVIIEPPRPRDARALQQGFV
RVPAVIAEAGALALKHPVLSLLLTALALFLMATNPVEVLWPTYAKPMLDADYANTLIGALTAGYFFAIAIGAGISPRISR
LFRRRSAVVLAALFACLAAAQVVLAIQGSVAGFVCMFLIYAVLLGASETPASSLLHACVADRQRSTMLSLRSLIQQLGAA
VGLLMAGGLAEIYTTSLAWIIGAVFLLIAVGLCLILAKRLAGSGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46898; Mature: 46898

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS00079 MULTICOPPER_OXIDASE1 ; PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA