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The map label for this gene is yfgC [H]

Identifier: 99080705

GI number: 99080705

Start: 917929

End: 919350

Strand: Reverse

Name: yfgC [H]

Synonym: TM1040_0864

Alternate gene names: 99080705

Gene position: 919350-917929 (Counterclockwise)

Preceding gene: 99080710

Following gene: 99080704

Centisome position: 28.72

GC content: 64.06

Gene sequence:

>1422_bases
ATGAGTTTTGAGCGCGTATTCTCTCTGGCGTCAATCCCGTGCGCACGTCTGTTTCGTCTTCTGGCCGCAGCGGTGGGCAG
AGGGTGCGGCCGTGGGCCGGTGCTGGCAGCATGTCTTGCCGCCGTGCTGGCCTTTGCGCCGATCGCGGCGCAGGCGCAAT
CCATTCGCCTTCTGCGCGACGCCGATATCGAACACGGGCTGACGGAGCTTGCGCGCCCCATTCTAACCGCCGCCGGTCTG
AGCCCGCGACGGGTGCGCATCCTTGTGGTGAATGACAGCAGTTTCAATGCCTTCGTGATCGACCACCGGGCGATCTTTAT
CAACTACGGTCTGATCCTGAAGGCCGAGAGCCCAGAGATGCTGCAGGCGCTGATCGCCCATGAAGCGGCCCATATCGCCA
ATGGCCACATCGGGCGGCGGGTGCAGAACATGCGCTCTGCGAGCACGGCCGCAGGCCTTGGGGTTGCGCTCGGGCTGCTG
GCATCGGCCGCAGGGGGCGGCAAGGCAGGCGCGGGCGTGGCCTTTGGGGTGCAATCCTCGGCGCTGCGCAATTTCCTGTC
GCACACCCGCGCCGAAGAAGCCTCTGCCGACCGCTCCGCCATCGGGTTCATGACAGCCGCCGGGGTCAATCCCAAGGGCA
TGGTGGAACTGCACAGGATTTTTGCTGGCCAAGAGGTCCTGAGCACAGGTTCGCAAGATCCTTATATGCGCTCGCACCCG
CTGACACGCGACCGGATGCGCGCCGCAGAAGCCTATGTGGCCAGCGCGGGCGCCGCGGCGGCCTCCGACCCTGCCGCCGC
CTATTGGCTGGCGCGGGTGCAGGGCAAGCTTTCTGCCTTTACGCGCGCGCCAAGCTGGACCAAGCGACGGGTCGCCTCCG
AAGGGTATGCGGATGTCAAACGCATGCGTCTTGCGGTGGCGCATCACCGGCAAAACAGTTTCTCCCGCGCGCAAAAGGAA
ATGCAGGCGCTTTTGGCCACACGCCCGAAGGACGCCTATTACCACGAGCTCTGGGGTCAGATCCTCTATGAAAACCGCCG
CTGGGGCGCTGCAGTCTCGGCCTTTGGCACAGCCGCCAGCCTCTCCCCAAACGAGCCTTTGATCCTCGCAAGCCTCGGGC
GCGCGCAGCTGGCAGCGGGCAATCCCCGCGCCGCCCTCAAGACGATGGAAAAGGCCCGAGGCCTTGATTTTCGCAATGCA
ACCCTCTTGCGCGATATGTCGCTGGCCTATGCGCAAACCAATCAGACCGGCATGGCTGCGCTTGTGACCGCCGAGCGCTA
TGCGCTTCAGGGGCGTCTCAAGGATGCAGGACCACATGCCAAACGCGCAACCGGCCTTCTGGCCAAAGGGTCCCCGGCCT
GGCGCCGGGCCCAGGATGTTCTAATTGCCTTTGAACAAGACGAGAAAAGGAACCAAAAATGA

Upstream 100 bases:

>100_bases
CTCTTCCGCCTTGCGGGCGGCCTCCATCACATCCATCACAATGAAGGGATCGACCTTGGACCGGCTTGAGTTTCGCATGT
TGATCTCCCATGGTGCGGCC

Downstream 100 bases:

>100_bases
TTGCCCCGACACGCATGGCCCTGATCGCGGCCTGCGCGCTCTCTCTCTCTGCTCCGGCAGCGCGGGCGCTTGACCTCAAC
GACATGTCCGACAGCGAAAA

Product: peptidase M48, Ste24p

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 473; Mature: 472

Protein sequence:

>473_residues
MSFERVFSLASIPCARLFRLLAAAVGRGCGRGPVLAACLAAVLAFAPIAAQAQSIRLLRDADIEHGLTELARPILTAAGL
SPRRVRILVVNDSSFNAFVIDHRAIFINYGLILKAESPEMLQALIAHEAAHIANGHIGRRVQNMRSASTAAGLGVALGLL
ASAAGGGKAGAGVAFGVQSSALRNFLSHTRAEEASADRSAIGFMTAAGVNPKGMVELHRIFAGQEVLSTGSQDPYMRSHP
LTRDRMRAAEAYVASAGAAAASDPAAAYWLARVQGKLSAFTRAPSWTKRRVASEGYADVKRMRLAVAHHRQNSFSRAQKE
MQALLATRPKDAYYHELWGQILYENRRWGAAVSAFGTAASLSPNEPLILASLGRAQLAAGNPRAALKTMEKARGLDFRNA
TLLRDMSLAYAQTNQTGMAALVTAERYALQGRLKDAGPHAKRATGLLAKGSPAWRRAQDVLIAFEQDEKRNQK

Sequences:

>Translated_473_residues
MSFERVFSLASIPCARLFRLLAAAVGRGCGRGPVLAACLAAVLAFAPIAAQAQSIRLLRDADIEHGLTELARPILTAAGL
SPRRVRILVVNDSSFNAFVIDHRAIFINYGLILKAESPEMLQALIAHEAAHIANGHIGRRVQNMRSASTAAGLGVALGLL
ASAAGGGKAGAGVAFGVQSSALRNFLSHTRAEEASADRSAIGFMTAAGVNPKGMVELHRIFAGQEVLSTGSQDPYMRSHP
LTRDRMRAAEAYVASAGAAAASDPAAAYWLARVQGKLSAFTRAPSWTKRRVASEGYADVKRMRLAVAHHRQNSFSRAQKE
MQALLATRPKDAYYHELWGQILYENRRWGAAVSAFGTAASLSPNEPLILASLGRAQLAAGNPRAALKTMEKARGLDFRNA
TLLRDMSLAYAQTNQTGMAALVTAERYALQGRLKDAGPHAKRATGLLAKGSPAWRRAQDVLIAFEQDEKRNQK
>Mature_472_residues
SFERVFSLASIPCARLFRLLAAAVGRGCGRGPVLAACLAAVLAFAPIAAQAQSIRLLRDADIEHGLTELARPILTAAGLS
PRRVRILVVNDSSFNAFVIDHRAIFINYGLILKAESPEMLQALIAHEAAHIANGHIGRRVQNMRSASTAAGLGVALGLLA
SAAGGGKAGAGVAFGVQSSALRNFLSHTRAEEASADRSAIGFMTAAGVNPKGMVELHRIFAGQEVLSTGSQDPYMRSHPL
TRDRMRAAEAYVASAGAAAASDPAAAYWLARVQGKLSAFTRAPSWTKRRVASEGYADVKRMRLAVAHHRQNSFSRAQKEM
QALLATRPKDAYYHELWGQILYENRRWGAAVSAFGTAASLSPNEPLILASLGRAQLAAGNPRAALKTMEKARGLDFRNAT
LLRDMSLAYAQTNQTGMAALVTAERYALQGRLKDAGPHAKRATGLLAKGSPAWRRAQDVLIAFEQDEKRNQK

Specific function: Unknown

COG id: COG4783

COG function: function code R; Putative Zn-dependent protease, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 TPR repeats [H]

Homologues:

Organism=Escherichia coli, GI1788840, Length=386, Percent_Identity=22.020725388601, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001915
- InterPro:   IPR011990 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 50610; Mature: 50478

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFERVFSLASIPCARLFRLLAAAVGRGCGRGPVLAACLAAVLAFAPIAAQAQSIRLLRD
CCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADIEHGLTELARPILTAAGLSPRRVRILVVNDSSFNAFVIDHRAIFINYGLILKAESPEM
CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECEEEEEEEEEEEECCCHHH
LQALIAHEAAHIANGHIGRRVQNMRSASTAAGLGVALGLLASAAGGGKAGAGVAFGVQSS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHH
ALRNFLSHTRAEEASADRSAIGFMTAAGVNPKGMVELHRIFAGQEVLSTGSQDPYMRSHP
HHHHHHHHHHHHHHCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LTRDRMRAAEAYVASAGAAAASDPAAAYWLARVQGKLSAFTRAPSWTKRRVASEGYADVK
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHH
RMRLAVAHHRQNSFSRAQKEMQALLATRPKDAYYHELWGQILYENRRWGAAVSAFGTAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC
LSPNEPLILASLGRAQLAAGNPRAALKTMEKARGLDFRNATLLRDMSLAYAQTNQTGMAA
CCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEE
LVTAERYALQGRLKDAGPHAKRATGLLAKGSPAWRRAQDVLIAFEQDEKRNQK
HHHHHHHHHHCCCCCCCCCHHHHHCCEECCCHHHHHHHHHEEEEECCCCCCCC
>Mature Secondary Structure 
SFERVFSLASIPCARLFRLLAAAVGRGCGRGPVLAACLAAVLAFAPIAAQAQSIRLLRD
CHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADIEHGLTELARPILTAAGLSPRRVRILVVNDSSFNAFVIDHRAIFINYGLILKAESPEM
CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEECEEEEEEEEEEEECCCHHH
LQALIAHEAAHIANGHIGRRVQNMRSASTAAGLGVALGLLASAAGGGKAGAGVAFGVQSS
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHH
ALRNFLSHTRAEEASADRSAIGFMTAAGVNPKGMVELHRIFAGQEVLSTGSQDPYMRSHP
HHHHHHHHHHHHHHCCCHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LTRDRMRAAEAYVASAGAAAASDPAAAYWLARVQGKLSAFTRAPSWTKRRVASEGYADVK
CCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHH
RMRLAVAHHRQNSFSRAQKEMQALLATRPKDAYYHELWGQILYENRRWGAAVSAFGTAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC
LSPNEPLILASLGRAQLAAGNPRAALKTMEKARGLDFRNATLLRDMSLAYAQTNQTGMAA
CCCCCCEEEEECCCHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCEE
LVTAERYALQGRLKDAGPHAKRATGLLAKGSPAWRRAQDVLIAFEQDEKRNQK
HHHHHHHHHHCCCCCCCCCHHHHHCCEECCCHHHHHHHHHEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]