| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080681
Identifier: 99080681
GI number: 99080681
Start: 887215
End: 887457
Strand: Reverse
Name: 99080681
Synonym: TM1040_0840
Alternate gene names: NA
Gene position: 887457-887215 (Counterclockwise)
Preceding gene: 99080685
Following gene: 99080679
Centisome position: 27.72
GC content: 49.38
Gene sequence:
>243_bases TTGACTTCCATAGGCCTGCGCTTCGAGGTTCCTATGATCAGTGAATTTCCTCGCACCAATGGGCCCAAGGTGAGCATTAA AGATCGCATCATGGTTCGAAAACACCATGTGTGTCGCTGGCGGCCCAATGACGCGAGGATAGGCTTACGTATTCCTCGTG TCTTGTTCTCAAAGAAAATCGCGAAAAGTATCAGCATCCGGCACTTGGAGTATCTGGTTGGTTCACCTGAAGTGACGCAA TGA
Upstream 100 bases:
>100_bases GGACAATTCTTAGAAAGAAATCTTTGGTCGATTCTCTGGTGTCTACCGCGCACCTCTTGCAGCGGCTCAGCTTCGCGACC CAGACGATGCCCCAACACCT
Downstream 100 bases:
>100_bases TGCAGAGTTTTGAACGATGGGCATCACGTTGCCCGTCTGCGCCAAGTCACCTCGCGCTGAGGCGCTGTTGCATCACATTC CTCAAACTTTGATCAGCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MTSIGLRFEVPMISEFPRTNGPKVSIKDRIMVRKHHVCRWRPNDARIGLRIPRVLFSKKIAKSISIRHLEYLVGSPEVTQ
Sequences:
>Translated_80_residues MTSIGLRFEVPMISEFPRTNGPKVSIKDRIMVRKHHVCRWRPNDARIGLRIPRVLFSKKIAKSISIRHLEYLVGSPEVTQ >Mature_79_residues TSIGLRFEVPMISEFPRTNGPKVSIKDRIMVRKHHVCRWRPNDARIGLRIPRVLFSKKIAKSISIRHLEYLVGSPEVTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9295; Mature: 9164
Theoretical pI: Translated: 11.78; Mature: 11.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSIGLRFEVPMISEFPRTNGPKVSIKDRIMVRKHHVCRWRPNDARIGLRIPRVLFSKKI CCCCCCEEECCCCCCCCCCCCCEEEECCEEEEECCCEEEECCCCCEEEEECHHHHHHHHH AKSISIRHLEYLVGSPEVTQ HHHHHHHHHEECCCCCCCCC >Mature Secondary Structure TSIGLRFEVPMISEFPRTNGPKVSIKDRIMVRKHHVCRWRPNDARIGLRIPRVLFSKKI CCCCCEEECCCCCCCCCCCCCEEEECCEEEEECCCEEEECCCCCEEEEECHHHHHHHHH AKSISIRHLEYLVGSPEVTQ HHHHHHHHHEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA