Definition | Ruegeria sp. TM1040, complete genome. |
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Accession | NC_008044 |
Length | 3,200,938 |
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The map label for this gene is 99080670
Identifier: 99080670
GI number: 99080670
Start: 870157
End: 870582
Strand: Reverse
Name: 99080670
Synonym: TM1040_0829
Alternate gene names: NA
Gene position: 870582-870157 (Counterclockwise)
Preceding gene: 99080671
Following gene: 99080669
Centisome position: 27.2
GC content: 50.23
Gene sequence:
>426_bases ATGAGCACTTCATCTCCCATTGGCTCGATAATGCTCATCGACGATAACGAGATTGACCATCGCATGTGCAAACGAGTGGT CGAACGCTCAGGGTTGGTCGGGGAATTTATAACGTTTCTTTCAGCGGAAGAGGCGCTTGACCACTTGAGGCAGGCAGGCG ACAGACCGGTAGTGGATGCAATCCTGCTAGACGTTAACATGCCCCGCATGGATGGGTTCGAGTTTTTGGAAACCGCGACA GCGGAATTGGGTGAACGCTTCGCACGTGTCGTCGTCATGATGCTCACAACCTCGCTCAACCCAAGAGACAAAGAACGTGC GCAACAATTCTCTGTAGTGAGAGACTACTGCAACAAACCGCTCATCATAGAATATCTACAACGATTGGCAGATATTTTGG CGAATGATCCTGAGACGGCCAAATGA
Upstream 100 bases:
>100_bases TTTGCCGTCGCGTGGCGCTAAACCATGGTGGGGATATTCAAGTCTCCTCGAAGCTTGGCCAAGGAACAACTTTCACCGTA TCTTTTCCGGAGCGAAACAC
Downstream 100 bases:
>100_bases AATAGACAACTCCCAAAATACGAGATGAAACGACTCCTAAATCAGCGCACGATCAAGAGCGGATCAACAAGCCAAAAAGC TCGAGAGTTTGAATGACTAA
Product: response regulator receiver protein
Products: NA
Alternate protein names: Response Regulator Receiver; Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator; Response Regulator; Two-Component System Signal Receiver; Receiver Component Of A Two-Component Response Regulator; Response Regulator Of Ato Ornithine Decarboxylase Antizyme; Two-Component Response Regulator CheY-Like; Receiver Protein Of A Two-Component Response Regulator
Number of amino acids: Translated: 141; Mature: 140
Protein sequence:
>141_residues MSTSSPIGSIMLIDDNEIDHRMCKRVVERSGLVGEFITFLSAEEALDHLRQAGDRPVVDAILLDVNMPRMDGFEFLETAT AELGERFARVVVMMLTTSLNPRDKERAQQFSVVRDYCNKPLIIEYLQRLADILANDPETAK
Sequences:
>Translated_141_residues MSTSSPIGSIMLIDDNEIDHRMCKRVVERSGLVGEFITFLSAEEALDHLRQAGDRPVVDAILLDVNMPRMDGFEFLETAT AELGERFARVVVMMLTTSLNPRDKERAQQFSVVRDYCNKPLIIEYLQRLADILANDPETAK >Mature_140_residues STSSPIGSIMLIDDNEIDHRMCKRVVERSGLVGEFITFLSAEEALDHLRQAGDRPVVDAILLDVNMPRMDGFEFLETATA ELGERFARVVVMMLTTSLNPRDKERAQQFSVVRDYCNKPLIIEYLQRLADILANDPETAK
Specific function: Unknown
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15945; Mature: 15813
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSSPIGSIMLIDDNEIDHRMCKRVVERSGLVGEFITFLSAEEALDHLRQAGDRPVVDA CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH ILLDVNMPRMDGFEFLETATAELGERFARVVVMMLTTSLNPRDKERAQQFSVVRDYCNKP HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC LIIEYLQRLADILANDPETAK HHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure STSSPIGSIMLIDDNEIDHRMCKRVVERSGLVGEFITFLSAEEALDHLRQAGDRPVVDA CCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH ILLDVNMPRMDGFEFLETATAELGERFARVVVMMLTTSLNPRDKERAQQFSVVRDYCNKP HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC LIIEYLQRLADILANDPETAK HHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA