Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080670

Identifier: 99080670

GI number: 99080670

Start: 870157

End: 870582

Strand: Reverse

Name: 99080670

Synonym: TM1040_0829

Alternate gene names: NA

Gene position: 870582-870157 (Counterclockwise)

Preceding gene: 99080671

Following gene: 99080669

Centisome position: 27.2

GC content: 50.23

Gene sequence:

>426_bases
ATGAGCACTTCATCTCCCATTGGCTCGATAATGCTCATCGACGATAACGAGATTGACCATCGCATGTGCAAACGAGTGGT
CGAACGCTCAGGGTTGGTCGGGGAATTTATAACGTTTCTTTCAGCGGAAGAGGCGCTTGACCACTTGAGGCAGGCAGGCG
ACAGACCGGTAGTGGATGCAATCCTGCTAGACGTTAACATGCCCCGCATGGATGGGTTCGAGTTTTTGGAAACCGCGACA
GCGGAATTGGGTGAACGCTTCGCACGTGTCGTCGTCATGATGCTCACAACCTCGCTCAACCCAAGAGACAAAGAACGTGC
GCAACAATTCTCTGTAGTGAGAGACTACTGCAACAAACCGCTCATCATAGAATATCTACAACGATTGGCAGATATTTTGG
CGAATGATCCTGAGACGGCCAAATGA

Upstream 100 bases:

>100_bases
TTTGCCGTCGCGTGGCGCTAAACCATGGTGGGGATATTCAAGTCTCCTCGAAGCTTGGCCAAGGAACAACTTTCACCGTA
TCTTTTCCGGAGCGAAACAC

Downstream 100 bases:

>100_bases
AATAGACAACTCCCAAAATACGAGATGAAACGACTCCTAAATCAGCGCACGATCAAGAGCGGATCAACAAGCCAAAAAGC
TCGAGAGTTTGAATGACTAA

Product: response regulator receiver protein

Products: NA

Alternate protein names: Response Regulator Receiver; Response Regulator Receiver Domain-Containing Protein; Two-Component Response Regulator; Response Regulator; Two-Component System Signal Receiver; Receiver Component Of A Two-Component Response Regulator; Response Regulator Of Ato Ornithine Decarboxylase Antizyme; Two-Component Response Regulator CheY-Like; Receiver Protein Of A Two-Component Response Regulator

Number of amino acids: Translated: 141; Mature: 140

Protein sequence:

>141_residues
MSTSSPIGSIMLIDDNEIDHRMCKRVVERSGLVGEFITFLSAEEALDHLRQAGDRPVVDAILLDVNMPRMDGFEFLETAT
AELGERFARVVVMMLTTSLNPRDKERAQQFSVVRDYCNKPLIIEYLQRLADILANDPETAK

Sequences:

>Translated_141_residues
MSTSSPIGSIMLIDDNEIDHRMCKRVVERSGLVGEFITFLSAEEALDHLRQAGDRPVVDAILLDVNMPRMDGFEFLETAT
AELGERFARVVVMMLTTSLNPRDKERAQQFSVVRDYCNKPLIIEYLQRLADILANDPETAK
>Mature_140_residues
STSSPIGSIMLIDDNEIDHRMCKRVVERSGLVGEFITFLSAEEALDHLRQAGDRPVVDAILLDVNMPRMDGFEFLETATA
ELGERFARVVVMMLTTSLNPRDKERAQQFSVVRDYCNKPLIIEYLQRLADILANDPETAK

Specific function: Unknown

COG id: COG0784

COG function: function code T; FOG: CheY-like receiver

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15945; Mature: 15813

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSSPIGSIMLIDDNEIDHRMCKRVVERSGLVGEFITFLSAEEALDHLRQAGDRPVVDA
CCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ILLDVNMPRMDGFEFLETATAELGERFARVVVMMLTTSLNPRDKERAQQFSVVRDYCNKP
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
LIIEYLQRLADILANDPETAK
HHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
STSSPIGSIMLIDDNEIDHRMCKRVVERSGLVGEFITFLSAEEALDHLRQAGDRPVVDA
CCCCCCCEEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
ILLDVNMPRMDGFEFLETATAELGERFARVVVMMLTTSLNPRDKERAQQFSVVRDYCNKP
HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCC
LIIEYLQRLADILANDPETAK
HHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA