Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080629

Identifier: 99080629

GI number: 99080629

Start: 840662

End: 841195

Strand: Reverse

Name: 99080629

Synonym: TM1040_0788

Alternate gene names: NA

Gene position: 841195-840662 (Counterclockwise)

Preceding gene: 99080630

Following gene: 99080628

Centisome position: 26.28

GC content: 51.12

Gene sequence:

>534_bases
TTGCCCATCCAGTATTCGCTCGCGGATCGAATTTTTCAAACCTCAAAAGACTTATTGCCTCCATTTGAGTGGAAACCAAC
GACCAATGGAAGCGGCCATGAGCACCGTCGAGGCATAGAATGTCGGGTCAGGATCGGTGGGTCCATGCCGAGAGGCGTGT
TCTTTCGAATTGCATTGTTTCCTCGCTTTCGACTGCGTGCGACATTCCAACTCGAGTGCGAAAGAGATTCTGGCCGCGCT
CACATACCCCTGTATCGGCTAGATGTTGATCCAGCATCAGCCCATCAAAATAAGCTCTTCGGGCCTCCAGAGGTTCATGG
AATATTTTTGCCTCAAGGTAAGAACCATGAGCACATATTCTATGACAGCCTGCGAGAGGATGGCGGGCTAAGGTTGCACG
GCGCAGTGCAAGCAAGACCGGTGGAGGCGGACTTTACAGAATTTTCTGAGGCGCTTGCTTATGTCTGTGATACACTCAAA
ATCAATAACCGAGGCGATCTTCCTCCTCCTGGCGATCAAGGCGTTCTGCTGTGA

Upstream 100 bases:

>100_bases
ACATGTGGAACGTGCGCCTAAAGTGGGCCGCCCGCGTGCGACTGCACTGGCCTGCGGAGTTTGCGAGGAAGAAATAGACC
TTTAAGAGAAGAGATTAAGT

Downstream 100 bases:

>100_bases
ATGTGATCAAAGCTGACGAAATCCTAACTGCCCGCACAATCGAGGCAATCAACCGCTTGAGCAGCGTAACTCAGGAGGCT
GACAAGGTACTCGCACACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MPIQYSLADRIFQTSKDLLPPFEWKPTTNGSGHEHRRGIECRVRIGGSMPRGVFFRIALFPRFRLRATFQLECERDSGRA
HIPLYRLDVDPASAHQNKLFGPPEVHGIFLPQGKNHEHIFYDSLREDGGLRLHGAVQARPVEADFTEFSEALAYVCDTLK
INNRGDLPPPGDQGVLL

Sequences:

>Translated_177_residues
MPIQYSLADRIFQTSKDLLPPFEWKPTTNGSGHEHRRGIECRVRIGGSMPRGVFFRIALFPRFRLRATFQLECERDSGRA
HIPLYRLDVDPASAHQNKLFGPPEVHGIFLPQGKNHEHIFYDSLREDGGLRLHGAVQARPVEADFTEFSEALAYVCDTLK
INNRGDLPPPGDQGVLL
>Mature_176_residues
PIQYSLADRIFQTSKDLLPPFEWKPTTNGSGHEHRRGIECRVRIGGSMPRGVFFRIALFPRFRLRATFQLECERDSGRAH
IPLYRLDVDPASAHQNKLFGPPEVHGIFLPQGKNHEHIFYDSLREDGGLRLHGAVQARPVEADFTEFSEALAYVCDTLKI
NNRGDLPPPGDQGVLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20045; Mature: 19914

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIQYSLADRIFQTSKDLLPPFEWKPTTNGSGHEHRRGIECRVRIGGSMPRGVFFRIALF
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEC
PRFRLRATFQLECERDSGRAHIPLYRLDVDPASAHQNKLFGPPEVHGIFLPQGKNHEHIF
CCEEEEEEEEEEEECCCCCEECEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE
YDSLREDGGLRLHGAVQARPVEADFTEFSEALAYVCDTLKINNRGDLPPPGDQGVLL
EECCCCCCCEEEEECEEECCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIQYSLADRIFQTSKDLLPPFEWKPTTNGSGHEHRRGIECRVRIGGSMPRGVFFRIALF
CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEC
PRFRLRATFQLECERDSGRAHIPLYRLDVDPASAHQNKLFGPPEVHGIFLPQGKNHEHIF
CCEEEEEEEEEEEECCCCCEECEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE
YDSLREDGGLRLHGAVQARPVEADFTEFSEALAYVCDTLKINNRGDLPPPGDQGVLL
EECCCCCCCEEEEECEEECCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA