Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080628

Identifier: 99080628

GI number: 99080628

Start: 839907

End: 840665

Strand: Reverse

Name: 99080628

Synonym: TM1040_0787

Alternate gene names: NA

Gene position: 840665-839907 (Counterclockwise)

Preceding gene: 99080629

Following gene: 99080627

Centisome position: 26.26

GC content: 51.91

Gene sequence:

>759_bases
GTGAATGTGATCAAAGCTGACGAAATCCTAACTGCCCGCACAATCGAGGCAATCAACCGCTTGAGCAGCGTAACTCAGGA
GGCTGACAAGGTACTCGCACACGTTCCGGTAGCTTACCCCAGCGGAGCGCTCGCTTGCGTCGAGCTGCAAAGGCACGCTG
AACACTGCTGGGTTTCAGATATGGGCCGTGGTCTAGTTGAAGCTGAATTTATGAACGCAGATAGCTACTTCCCAAGTATC
GCTAGGACATTGGCGAAGGACAATGGCGTTGACTATGATGGGCATGCGATATTCGCCATAAAAGTGCCACTAGCTCATCT
CGAGGCTGCTATTGTTACCGTGGCAAACACATCGTCCCAAGCCGCGGCAGAAGCCGTTCGCAGATCAATTGAATCCAAGG
CCGCTGACACACACGCCGAAGTTTTCGAGCGGATTGTCAAAGTGTTTGGAGCTCATAACGTTGCACGAAAAGCAGAGGTG
TCAGGTCGCCACTCAAGTTGGGAGGCACACAACGTTGTCTCTCTCCCATCGCGCAGGCTAGCGATTTTCGAACACATCAC
CGCGCACCCGCACTCTATCTCTAGCAAATTCCTCATGTTCTCTGACATCCGCCGCGCTGAACAAGGACATTCGCTCAACG
CAGTAATCAATTCGATTAGTTCACTAAGCGACCGTGGGCAGATCATCAGTGACGTTGCCAATGTTGTTGAAATTGGTGAG
ACCGATGATGCTTTTAGGGAGCTAGCTCGAGTAGCGTAG

Upstream 100 bases:

>100_bases
ACTTTACAGAATTTTCTGAGGCGCTTGCTTATGTCTGTGATACACTCAAAATCAATAACCGAGGCGATCTTCCTCCTCCT
GGCGATCAAGGCGTTCTGCT

Downstream 100 bases:

>100_bases
CGCTGAGGCTGCCTGTGCTTCTGCCGATTGTAGAACCCCGCTCCGGCGGGGTTTTTCTTTGCGCGCACGGTGCTTTGAGT
TCTGCGCCGGGAACGGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MNVIKADEILTARTIEAINRLSSVTQEADKVLAHVPVAYPSGALACVELQRHAEHCWVSDMGRGLVEAEFMNADSYFPSI
ARTLAKDNGVDYDGHAIFAIKVPLAHLEAAIVTVANTSSQAAAEAVRRSIESKAADTHAEVFERIVKVFGAHNVARKAEV
SGRHSSWEAHNVVSLPSRRLAIFEHITAHPHSISSKFLMFSDIRRAEQGHSLNAVINSISSLSDRGQIISDVANVVEIGE
TDDAFRELARVA

Sequences:

>Translated_252_residues
MNVIKADEILTARTIEAINRLSSVTQEADKVLAHVPVAYPSGALACVELQRHAEHCWVSDMGRGLVEAEFMNADSYFPSI
ARTLAKDNGVDYDGHAIFAIKVPLAHLEAAIVTVANTSSQAAAEAVRRSIESKAADTHAEVFERIVKVFGAHNVARKAEV
SGRHSSWEAHNVVSLPSRRLAIFEHITAHPHSISSKFLMFSDIRRAEQGHSLNAVINSISSLSDRGQIISDVANVVEIGE
TDDAFRELARVA
>Mature_252_residues
MNVIKADEILTARTIEAINRLSSVTQEADKVLAHVPVAYPSGALACVELQRHAEHCWVSDMGRGLVEAEFMNADSYFPSI
ARTLAKDNGVDYDGHAIFAIKVPLAHLEAAIVTVANTSSQAAAEAVRRSIESKAADTHAEVFERIVKVFGAHNVARKAEV
SGRHSSWEAHNVVSLPSRRLAIFEHITAHPHSISSKFLMFSDIRRAEQGHSLNAVINSISSLSDRGQIISDVANVVEIGE
TDDAFRELARVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27397; Mature: 27397

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVIKADEILTARTIEAINRLSSVTQEADKVLAHVPVAYPSGALACVELQRHAEHCWVSD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHH
MGRGLVEAEFMNADSYFPSIARTLAKDNGVDYDGHAIFAIKVPLAHLEAAIVTVANTSSQ
HCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHEEECCCHH
AAAEAVRRSIESKAADTHAEVFERIVKVFGAHNVARKAEVSGRHSSWEAHNVVSLPSRRL
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
AIFEHITAHPHSISSKFLMFSDIRRAEQGHSLNAVINSISSLSDRGQIISDVANVVEIGE
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TDDAFRELARVA
CHHHHHHHHHCC
>Mature Secondary Structure
MNVIKADEILTARTIEAINRLSSVTQEADKVLAHVPVAYPSGALACVELQRHAEHCWVSD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHH
MGRGLVEAEFMNADSYFPSIARTLAKDNGVDYDGHAIFAIKVPLAHLEAAIVTVANTSSQ
HCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHEEECCCHH
AAAEAVRRSIESKAADTHAEVFERIVKVFGAHNVARKAEVSGRHSSWEAHNVVSLPSRRL
HHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHH
AIFEHITAHPHSISSKFLMFSDIRRAEQGHSLNAVINSISSLSDRGQIISDVANVVEIGE
HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
TDDAFRELARVA
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA