Definition | Ruegeria sp. TM1040, complete genome. |
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Accession | NC_008044 |
Length | 3,200,938 |
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The map label for this gene is 99080626
Identifier: 99080626
GI number: 99080626
Start: 838781
End: 839026
Strand: Reverse
Name: 99080626
Synonym: TM1040_0785
Alternate gene names: NA
Gene position: 839026-838781 (Counterclockwise)
Preceding gene: 99080627
Following gene: 99080625
Centisome position: 26.21
GC content: 64.63
Gene sequence:
>246_bases ATGAGCCACCTTTCCAACGTCACCCCCATTCGCACCCCGGCGGCAAAGTCCACCACTCACGCGACGCACACGCGCCGCCG GGGCAGTCACGATTGGAGCGCGGGGCCGTGGAAGCACCCAGCCCCCACCAATGGCGGCCCTGATCGCAAGAACTGGACGC TCACGCTGACGTTCTGGGCGCTGATGATCTTCGTCGCAATCCTGACCGCAGTGTCAGTCGGCGCCAGCCTTTCTAATCCC CTCTGA
Upstream 100 bases:
>100_bases ACATCGCCCGGACCTCCAGCTGTCGCAGAAGCGCGGAGAGAGCCCGCTTGGTTCTGGCACAGGTAGGAGATCCCTACCCT CTCGACCGGGAGGGCGCGGC
Downstream 100 bases:
>100_bases ACCTCCCTGTCGGGCGCATCACTGCGCGTCCGCAACTTCCCCGGCGGTGAGGGTTTCCTCCTCCCTATCCCGAAACCGCC GGGGCCTTCTATTCCAAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MSHLSNVTPIRTPAAKSTTHATHTRRRGSHDWSAGPWKHPAPTNGGPDRKNWTLTLTFWALMIFVAILTAVSVGASLSNP L
Sequences:
>Translated_81_residues MSHLSNVTPIRTPAAKSTTHATHTRRRGSHDWSAGPWKHPAPTNGGPDRKNWTLTLTFWALMIFVAILTAVSVGASLSNP L >Mature_80_residues SHLSNVTPIRTPAAKSTTHATHTRRRGSHDWSAGPWKHPAPTNGGPDRKNWTLTLTFWALMIFVAILTAVSVGASLSNPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8799; Mature: 8668
Theoretical pI: Translated: 12.35; Mature: 12.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHLSNVTPIRTPAAKSTTHATHTRRRGSHDWSAGPWKHPAPTNGGPDRKNWTLTLTFWA CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHH LMIFVAILTAVSVGASLSNPL HHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SHLSNVTPIRTPAAKSTTHATHTRRRGSHDWSAGPWKHPAPTNGGPDRKNWTLTLTFWA CCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHH LMIFVAILTAVSVGASLSNPL HHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA