Definition | Ruegeria sp. TM1040, complete genome. |
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Accession | NC_008044 |
Length | 3,200,938 |
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The map label for this gene is 99080562
Identifier: 99080562
GI number: 99080562
Start: 778374
End: 778766
Strand: Reverse
Name: 99080562
Synonym: TM1040_0721
Alternate gene names: NA
Gene position: 778766-778374 (Counterclockwise)
Preceding gene: 99080563
Following gene: 99080561
Centisome position: 24.33
GC content: 58.27
Gene sequence:
>393_bases ATGTACAAACCCTTTGCGCTTACTGCTGCCATGATCGCAACCGTCTTTGGCTTCTCCACCCCCACCCATGCAGGAAACCC CGGAAAGGTGTCGTCAGAGACGCCCCGGGTCCTGCGCATTTCCAAGGGTATTTGCGAAACATCCCGGCAGGATATGATCG GCTGGGCGCGCAGGATAGAAGGCGTTGGATCCTATGCTGTGCCCCGCTATCCGGCAGGCCAGCAGGTGAAATGCGACGGC TCAGACTCGGTTCTGCCGATTGGATATTCCTGGGGTTATGACACGCAAGCAGAGGCAGACGCTGCTGCGATGGCAGCCTG CACCGCACGGCTTCCAAGTGGGTTTGACAGATGCGTGGTGATTGGCCAGAGCTTCGATCGGACTTCTCGTTAG
Upstream 100 bases:
>100_bases ATGATATTTGAAATACTTACCTACGCGATAAGTCCCTCGAGCCACCGATGGATTCGCACTTTTGAAGAATTCGAATTCTT CATGTCGTTAGGAGGTAAAT
Downstream 100 bases:
>100_bases CCGCTTTGGTGCCGAAGGTGATCCCAATGTGACCAGGGGGTGGGGATTCGCGCGCCCTTGTGCAATCCCCTGCCAAGCAT TCGGCGCAAAATCGCCGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MYKPFALTAAMIATVFGFSTPTHAGNPGKVSSETPRVLRISKGICETSRQDMIGWARRIEGVGSYAVPRYPAGQQVKCDG SDSVLPIGYSWGYDTQAEADAAAMAACTARLPSGFDRCVVIGQSFDRTSR
Sequences:
>Translated_130_residues MYKPFALTAAMIATVFGFSTPTHAGNPGKVSSETPRVLRISKGICETSRQDMIGWARRIEGVGSYAVPRYPAGQQVKCDG SDSVLPIGYSWGYDTQAEADAAAMAACTARLPSGFDRCVVIGQSFDRTSR >Mature_130_residues MYKPFALTAAMIATVFGFSTPTHAGNPGKVSSETPRVLRISKGICETSRQDMIGWARRIEGVGSYAVPRYPAGQQVKCDG SDSVLPIGYSWGYDTQAEADAAAMAACTARLPSGFDRCVVIGQSFDRTSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13916; Mature: 13916
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKPFALTAAMIATVFGFSTPTHAGNPGKVSSETPRVLRISKGICETSRQDMIGWARRIE CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH GVGSYAVPRYPAGQQVKCDGSDSVLPIGYSWGYDTQAEADAAAMAACTARLPSGFDRCVV CCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE IGQSFDRTSR ECCCCCCCCC >Mature Secondary Structure MYKPFALTAAMIATVFGFSTPTHAGNPGKVSSETPRVLRISKGICETSRQDMIGWARRIE CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHH GVGSYAVPRYPAGQQVKCDGSDSVLPIGYSWGYDTQAEADAAAMAACTARLPSGFDRCVV CCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE IGQSFDRTSR ECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA