Definition Deinococcus geothermalis DSM 11300, complete genome.
Accession NC_008025
Length 2,467,205

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The map label for this gene is 94985905

Identifier: 94985905

GI number: 94985905

Start: 1921902

End: 1922774

Strand: Reverse

Name: 94985905

Synonym: Dgeo_1805

Alternate gene names: NA

Gene position: 1922774-1921902 (Counterclockwise)

Preceding gene: 94985906

Following gene: 94985904

Centisome position: 77.93

GC content: 65.18

Gene sequence:

>873_bases
GTGACGACCCCCCCCACCCCCGCGCCTGACCCGGCGCGCACCACGCCCGGCACCCTCGCGCACCAGATTCGCGCGGCCTG
GGCCTTTGTGTTCCGCGACTACCACCTCACCCGGCGCTACTGGTCCTGGGTGCTGGTCTTTACCTTCTACGACATGGTGT
CGGCGGCCAGCATCATGCTGATCGGCGTGGCGGCGCACAATCCTCGCCTGACCCTCACCCTGCTGCTGGGCGCCGTGATG
TGGTCCTTCCTGGGCCGCCTCTTCGGGGAGATCGCCAACAGCATCAGCTACGAACGCTGGGAAGGCACCATCGAGTACAC
CTTTATGGCCCCGGTCAGCCGCTTGACGCATCTGGTCGGTGTGAGCCTCTTTGCGGGGGCCTACGCGCTGCTGCGCGGGG
TGCTGGTGTTCCTGTTTATGAGCCTTTTCGTGGACATTGGGGCCAGCTTTACCCAGGTGCTGGAGTGCCTGGTGGTGTTT
ATGGTGGCCAGCCTGGGCTTTATGGGAATCGGCCTGATGGCGGCGGTGCTGCCGGTCATGAGCACCGAGAACGGCGCGCA
GGCCACCAACATCATTCAGGCCGTGTTCCTGCTGATCTCCGGTGTGTACTACCCGGTCAGCGTCCTGCCCGCCTGGCTCC
AGCCGATCAGCGCCCTCTCTCCGGCCACCTATGCCCTGAACGCCTGCCGCAAGATTCTGGGCGTCAACGGCACGGGGACC
GCCATCCAGCCCGGCGTGTCCCTGGCGGGTGTGTTGCCGGAACTGGGCATCCTGCTGCTGTTCGGCCTGATCACCATCCC
GCTGGGTCTATTCGTATTTGGGCGGGCCGAAAGCTGGGCCAAACGCACTGGAAAGCTGAAGCGGGTGGGATGA

Upstream 100 bases:

>100_bases
CGGACGAGCTGCGCGCCCTCGCTGGGCCAGGCAAGAGCCTGGAGGACGCCTTTATCGAACTGACCGGTGAGGATCTGGCC
AAGCAAGGCGAGGAGGAACT

Downstream 100 bases:

>100_bases
GCCTCTGGGAGAGTGCCGGGTGCGAGTTAAGCTTTTGCACTCTGCCCGCTTCCCCCAGCGCTCTGCCAGAATTCCCCCAT
GTTGACCCGCGCCGACCTGG

Product: ABC-2 type transporter

Products: NA

Alternate protein names: ABC-Type Multidrug Transport System Permease Component; ABC Transporter Permease Protein

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTTPPTPAPDPARTTPGTLAHQIRAAWAFVFRDYHLTRRYWSWVLVFTFYDMVSAASIMLIGVAAHNPRLTLTLLLGAVM
WSFLGRLFGEIANSISYERWEGTIEYTFMAPVSRLTHLVGVSLFAGAYALLRGVLVFLFMSLFVDIGASFTQVLECLVVF
MVASLGFMGIGLMAAVLPVMSTENGAQATNIIQAVFLLISGVYYPVSVLPAWLQPISALSPATYALNACRKILGVNGTGT
AIQPGVSLAGVLPELGILLLFGLITIPLGLFVFGRAESWAKRTGKLKRVG

Sequences:

>Translated_290_residues
MTTPPTPAPDPARTTPGTLAHQIRAAWAFVFRDYHLTRRYWSWVLVFTFYDMVSAASIMLIGVAAHNPRLTLTLLLGAVM
WSFLGRLFGEIANSISYERWEGTIEYTFMAPVSRLTHLVGVSLFAGAYALLRGVLVFLFMSLFVDIGASFTQVLECLVVF
MVASLGFMGIGLMAAVLPVMSTENGAQATNIIQAVFLLISGVYYPVSVLPAWLQPISALSPATYALNACRKILGVNGTGT
AIQPGVSLAGVLPELGILLLFGLITIPLGLFVFGRAESWAKRTGKLKRVG
>Mature_289_residues
TTPPTPAPDPARTTPGTLAHQIRAAWAFVFRDYHLTRRYWSWVLVFTFYDMVSAASIMLIGVAAHNPRLTLTLLLGAVMW
SFLGRLFGEIANSISYERWEGTIEYTFMAPVSRLTHLVGVSLFAGAYALLRGVLVFLFMSLFVDIGASFTQVLECLVVFM
VASLGFMGIGLMAAVLPVMSTENGAQATNIIQAVFLLISGVYYPVSVLPAWLQPISALSPATYALNACRKILGVNGTGTA
IQPGVSLAGVLPELGILLLFGLITIPLGLFVFGRAESWAKRTGKLKRVG

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31395; Mature: 31263

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TTPPTPAPDPARTTPGTLAHQIRAAWAFVFRDYHLTRRYWSWVLVFTFYDMVSAASIML
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IGVAAHNPRLTLTLLLGAVMWSFLGRLFGEIANSISYERWEGTIEYTFMAPVSRLTHLVG
HEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEEHHHHHHHHHHHH
VSLFAGAYALLRGVLVFLFMSLFVDIGASFTQVLECLVVFMVASLGFMGIGLMAAVLPVM
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STENGAQATNIIQAVFLLISGVYYPVSVLPAWLQPISALSPATYALNACRKILGVNGTGT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
AIQPGVSLAGVLPELGILLLFGLITIPLGLFVFGRAESWAKRTGKLKRVG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA