| Definition | Deinococcus geothermalis DSM 11300, complete genome. |
|---|---|
| Accession | NC_008025 |
| Length | 2,467,205 |
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The map label for this gene is 94985659
Identifier: 94985659
GI number: 94985659
Start: 1658516
End: 1659010
Strand: Reverse
Name: 94985659
Synonym: Dgeo_1559
Alternate gene names: NA
Gene position: 1659010-1658516 (Counterclockwise)
Preceding gene: 94985665
Following gene: 94985658
Centisome position: 67.24
GC content: 68.08
Gene sequence:
>495_bases GTGGCCCTGGGGACGGGGCCGAGTGCACCCAACCGGTTCGTCCCGTTTTCCTATAGCCGTCCAGCTCGGCCCCTACCGCC ACCCCAACCTGGCGAGCCGGTGCTGTTGACACTGGAAGGCCCCACTCGTACCCAGGTGTTTACACGGGCGCAGCTGCTGT CTCTCCCAACCGTGCGCTACACGACCGAGCACGCCCAGCTCCACCGCACCTTCACCTATGAGGGCGTGCCGCTGCGGGAC CTGGCGGTGCTGGGGGGCTTTGTGGGGCGCGATATGCGGCTGTACGCCAGCAACGGTTTCGTGACCACCATCCGGGCCCG CGATTACCTGGAGGCGCCGATCATGCTTGCGCACACCGCCAATGGGCGCCCGATTCCGGTGCTCGAGAAGGGACCGCTGA CGGTGGTGTTGCCCCCTGATCCGCAGCGCTTCCCGGCGCGGCTGTATGGAGCCGCCTGGGTGTGGTACGTCGAGCGCATC ACCCCGGCGCCGTGA
Upstream 100 bases:
>100_bases CTGACTTTGCCCGCTTGAGGCGCTTCGCCGTTCCACTCTACAGTGAAGCGTGCCCCCGAAAGTTCGTGTGCTGCTGTCAC TGCTGGCCCTGGGGTCCGGT
Downstream 100 bases:
>100_bases CGTCCGTGCCCCCGGTGTCTTGGTGGATCCGGCTGCGCGAGGTGGTGCTGGCCGCGTTGCCCGCCGTGCTCACCGTCGTG CTGCTGCTGCTTGCGACGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MALGTGPSAPNRFVPFSYSRPARPLPPPQPGEPVLLTLEGPTRTQVFTRAQLLSLPTVRYTTEHAQLHRTFTYEGVPLRD LAVLGGFVGRDMRLYASNGFVTTIRARDYLEAPIMLAHTANGRPIPVLEKGPLTVVLPPDPQRFPARLYGAAWVWYVERI TPAP
Sequences:
>Translated_164_residues MALGTGPSAPNRFVPFSYSRPARPLPPPQPGEPVLLTLEGPTRTQVFTRAQLLSLPTVRYTTEHAQLHRTFTYEGVPLRD LAVLGGFVGRDMRLYASNGFVTTIRARDYLEAPIMLAHTANGRPIPVLEKGPLTVVLPPDPQRFPARLYGAAWVWYVERI TPAP >Mature_163_residues ALGTGPSAPNRFVPFSYSRPARPLPPPQPGEPVLLTLEGPTRTQVFTRAQLLSLPTVRYTTEHAQLHRTFTYEGVPLRDL AVLGGFVGRDMRLYASNGFVTTIRARDYLEAPIMLAHTANGRPIPVLEKGPLTVVLPPDPQRFPARLYGAAWVWYVERIT PAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18170; Mature: 18039
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGTGPSAPNRFVPFSYSRPARPLPPPQPGEPVLLTLEGPTRTQVFTRAQLLSLPTVRY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEE TTEHAQLHRTFTYEGVPLRDLAVLGGFVGRDMRLYASNGFVTTIRARDYLEAPIMLAHTA ECCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCCEEEEECC NGRPIPVLEKGPLTVVLPPDPQRFPARLYGAAWVWYVERITPAP CCCCCEEECCCCEEEEECCCCCCCCHHHHHHEEEEEEEECCCCC >Mature Secondary Structure ALGTGPSAPNRFVPFSYSRPARPLPPPQPGEPVLLTLEGPTRTQVFTRAQLLSLPTVRY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCEEEE TTEHAQLHRTFTYEGVPLRDLAVLGGFVGRDMRLYASNGFVTTIRARDYLEAPIMLAHTA ECCCCEEEEEEEECCCCHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCCEEEEECC NGRPIPVLEKGPLTVVLPPDPQRFPARLYGAAWVWYVERITPAP CCCCCEEECCCCEEEEECCCCCCCCHHHHHHEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA