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The map label for this gene is yhbH [C]

Identifier: 94985484

GI number: 94985484

Start: 1465514

End: 1466074

Strand: Reverse

Name: yhbH [C]

Synonym: Dgeo_1384

Alternate gene names: 94985484

Gene position: 1466074-1465514 (Counterclockwise)

Preceding gene: 94985486

Following gene: 94985483

Centisome position: 59.42

GC content: 62.57

Gene sequence:

>561_bases
GTGCATATCTATCAGCTGTCAGGCCGAAACGTGGACGTCACCGATGCAATGCGCGATTACGTGGAGGAAAAGCTCACGCG
CCTGGACCGCTTTAGCGACCAGATCACCGACGCGCGTGTGGTGCTGACCGTCCGTGATGTGCGCGATGCCGGGCGGCGTA
ACCGCGTGGAGGTCCAGCTCAATGTGCCTAACGGCATCATCCGCGCCGAGGAACACCACGCTGACATGTACGCCGCAATC
GACCGCGCCTCCGACGTGTTGGAGCGCCAGCTGCGCAAATTCAAGACGAAATACCTGCGGCATCGTCAGGAAGCTGCGCC
GCCGCCCCAGCCCGGCCTGGCCGAGGCCGACGTGAACGCGGGCCTCGACGACACGGAGTTTCGCCCCGAGATTGTGCGCA
CCAAGCGCTTTGATCTGCGTCCGATGAGTCCTGAGGATGCCGTCACGCAGATGGAGGCGCTGGGCCATGACTTCTACGTT
TTCAAGAACATGGATACCGGCGGCTGTGCCGTGGTGTACCGCCGCCGCGATGGACATTACGGGTTGATTGAGCCGAGCTG
A

Upstream 100 bases:

>100_bases
TTCGCCTGACTTTTGGCGGGCAGGGCGCCTAGAGTGAACTCCCGGGGTCCAGCACTTCCTGGCTCCTGGCCACCCGGGAG
AAACAGAAAGAGGTGAAGCC

Downstream 100 bases:

>100_bases
TCGGGAATGAGGGGAGGAGCTGAGCGAAGCTCTTCCTCTCATTTTCCTCATTGCCGGGACGCTTGCCCTTTGGCATCTGC
TACCCTGGGGCGTTCATGAT

Product: sigma 54 modulation protein/ribosomal protein S30EA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MHIYQLSGRNVDVTDAMRDYVEEKLTRLDRFSDQITDARVVLTVRDVRDAGRRNRVEVQLNVPNGIIRAEEHHADMYAAI
DRASDVLERQLRKFKTKYLRHRQEAAPPPQPGLAEADVNAGLDDTEFRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYV
FKNMDTGGCAVVYRRRDGHYGLIEPS

Sequences:

>Translated_186_residues
MHIYQLSGRNVDVTDAMRDYVEEKLTRLDRFSDQITDARVVLTVRDVRDAGRRNRVEVQLNVPNGIIRAEEHHADMYAAI
DRASDVLERQLRKFKTKYLRHRQEAAPPPQPGLAEADVNAGLDDTEFRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYV
FKNMDTGGCAVVYRRRDGHYGLIEPS
>Mature_186_residues
MHIYQLSGRNVDVTDAMRDYVEEKLTRLDRFSDQITDARVVLTVRDVRDAGRRNRVEVQLNVPNGIIRAEEHHADMYAAI
DRASDVLERQLRKFKTKYLRHRQEAAPPPQPGLAEADVNAGLDDTEFRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYV
FKNMDTGGCAVVYRRRDGHYGLIEPS

Specific function: Probably Modulates The Activity Of Sigma(54) (Rpon). [C]

COG id: COG1544

COG function: function code J; Ribosome-associated protein Y (PSrp-1)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S30Ae family [H]

Homologues:

Organism=Escherichia coli, GI1789595, Length=96, Percent_Identity=38.5416666666667, Blast_Score=63, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003489 [H]

Pfam domain/function: PF02482 Ribosomal_S30AE [H]

EC number: NA

Molecular weight: Translated: 21440; Mature: 21440

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIYQLSGRNVDVTDAMRDYVEEKLTRLDRFSDQITDARVVLTVRDVRDAGRRNRVEVQL
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECHHCCCCCCEEEEEE
NVPNGIIRAEEHHADMYAAIDRASDVLERQLRKFKTKYLRHRQEAAPPPQPGLAEADVNA
ECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GLDDTEFRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYVFKNMDTGGCAVVYRRRDGHY
CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCE
GLIEPS
ECCCCC
>Mature Secondary Structure
MHIYQLSGRNVDVTDAMRDYVEEKLTRLDRFSDQITDARVVLTVRDVRDAGRRNRVEVQL
CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECHHCCCCCCEEEEEE
NVPNGIIRAEEHHADMYAAIDRASDVLERQLRKFKTKYLRHRQEAAPPPQPGLAEADVNA
ECCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GLDDTEFRPEIVRTKRFDLRPMSPEDAVTQMEALGHDFYVFKNMDTGGCAVVYRRRDGHY
CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCEEEEEEECCCCE
GLIEPS
ECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10567266 [H]