Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

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The map label for this gene is 94972259

Identifier: 94972259

GI number: 94972259

Start: 230938

End: 232029

Strand: Direct

Name: 94972259

Synonym: Dgeo_2793

Alternate gene names: NA

Gene position: 230938-232029 (Clockwise)

Preceding gene: 94972261

Following gene: 94972258

Centisome position: 40.22

GC content: 63.74

Gene sequence:

>1092_bases
GTGTATGACCTCAAGCTTCGCGGGGAGCGCGCGTCCATTCTGGCAGACGCGCTGCTCTCTGTCCCCACCAGCCCTTACCA
GAAGCGCAGCCTGGAGGCTGCGCTGGGCCTCTTTCTCGACCTGAAGACGAAAAAAGCGTTGCACTGGGCACACACGGTCA
GTGCCAGTGCGCTGAGTCGCCTGCTGAACGTGGATGAGTGGGACACGTCCGCCTGCTGGGCGACCCTGGTCCAGGCCCAA
TGGGACGCCCTGCTCCTCGCGGCACGGCGCAACCATCATCCTCGTTTGCGTCTGTGCGTGGACCTGACCAGCATCCCGAA
AACGGGACGCGAGCTGCCCTTCGTTCGCGTCTATCACGAGGTCTACGGGATTCATCTGGTGGTGCTGTACGCGGTGTACG
GGGACCTGAAGTTTCCTGTGGGCTACCGAGTGTACCGGGGGAAGGGGACCCCTTCCCCCGTCCGGCTCGCCCTGGAACTG
CTGGCCAGCGTGCCCGCCGAGGTGAGCCGCCGCTTCGACGTCTGGGTGTTGGCGGACAGCGGCTTCGAATCGTCAGCCTT
CCTGCAAGGCGTGCGGGACCTAGGCTTCGAGTTCGTGGTCGGGGTCCGTTCAACTCGCCGCACTGACCATCCCGGTCACG
TCACGGTGGAGGACTGCGAACACGGGAGCTGGGTGAATCTCGCCAACTGGCCCTGGGACACCCTGACGCTGGCCCGGATT
CACCGAGGAGAGCGCACCTTTTTCTCGGTGGCATCACAACTGCTCCCGGGCGACCTCGTCGCCCGGGAGGGAGCACGGCG
CTGGGCTATTGAGTCGTTTTTCAAGGAGGCCAAGCATGGCTTCGGGTTGAATCGGTTCGCGTTGCGAACCGCTCAAGGGC
TGGACCGCTGGGTGCTGCTGGTCTTCGCTGCCTTTACCTTGTCCATGCTCTGCCGAACCGATGCCTTGTCCCTGGAACAG
GCAGCGGAAGTTGCGGCTCGGGTGGCTCTGCCACTGCTGGTCGTTCAGCGACTCGCGGTCCAGGTCTGGCGAGAGGAAGA
ATTCCTGCGCCAGCACGGCTATTCACTGACCCTATCCAGGTGCAAGACCTAA

Upstream 100 bases:

>100_bases
CGCTCAGTATTAGGAAGGCGGAGAAAACGAGTTGAGCCGCTCTCATCTCTTGCACCTGAAGAGGTAGCGAGAAGGCGCTC
CCAGCCGCGAGAAAGAGGGT

Downstream 100 bases:

>100_bases
GCTTAATGCTTTCTTAATCTTAAACTCATCTTCCTAGGAGGATAGCATCTTGGAAAAATTTCGCTATGAGAAGCAGTAAA
ATCAGGATATGCAGGCAAAA

Product: transposase, IS4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MYDLKLRGERASILADALLSVPTSPYQKRSLEAALGLFLDLKTKKALHWAHTVSASALSRLLNVDEWDTSACWATLVQAQ
WDALLLAARRNHHPRLRLCVDLTSIPKTGRELPFVRVYHEVYGIHLVVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALEL
LASVPAEVSRRFDVWVLADSGFESSAFLQGVRDLGFEFVVGVRSTRRTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARI
HRGERTFFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRFALRTAQGLDRWVLLVFAAFTLSMLCRTDALSLEQ
AAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSRCKT

Sequences:

>Translated_363_residues
MYDLKLRGERASILADALLSVPTSPYQKRSLEAALGLFLDLKTKKALHWAHTVSASALSRLLNVDEWDTSACWATLVQAQ
WDALLLAARRNHHPRLRLCVDLTSIPKTGRELPFVRVYHEVYGIHLVVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALEL
LASVPAEVSRRFDVWVLADSGFESSAFLQGVRDLGFEFVVGVRSTRRTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARI
HRGERTFFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRFALRTAQGLDRWVLLVFAAFTLSMLCRTDALSLEQ
AAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSRCKT
>Mature_363_residues
MYDLKLRGERASILADALLSVPTSPYQKRSLEAALGLFLDLKTKKALHWAHTVSASALSRLLNVDEWDTSACWATLVQAQ
WDALLLAARRNHHPRLRLCVDLTSIPKTGRELPFVRVYHEVYGIHLVVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALEL
LASVPAEVSRRFDVWVLADSGFESSAFLQGVRDLGFEFVVGVRSTRRTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARI
HRGERTFFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRFALRTAQGLDRWVLLVFAAFTLSMLCRTDALSLEQ
AAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSRCKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40962; Mature: 40962

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYDLKLRGERASILADALLSVPTSPYQKRSLEAALGLFLDLKTKKALHWAHTVSASALSR
CCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLNVDEWDTSACWATLVQAQWDALLLAARRNHHPRLRLCVDLTSIPKTGRELPFVRVYHE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHCCCCCCCCCHHHHHHH
VYGIHLVVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALELLASVPAEVSRRFDVWVLADS
HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCEEEEEECC
GFESSAFLQGVRDLGFEFVVGVRSTRRTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARI
CCCHHHHHHHHHHCCHHEEEECHHCCCCCCCCCEEEECCCCCCEECCCCCCCHHHHHHHH
HRGERTFFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRFALRTAQGLDRWVLL
HCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VFAAFTLSMLCRTDALSLEQAAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHC
CKT
CCC
>Mature Secondary Structure
MYDLKLRGERASILADALLSVPTSPYQKRSLEAALGLFLDLKTKKALHWAHTVSASALSR
CCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLNVDEWDTSACWATLVQAQWDALLLAARRNHHPRLRLCVDLTSIPKTGRELPFVRVYHE
HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHCCCCCCCCCHHHHHHH
VYGIHLVVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALELLASVPAEVSRRFDVWVLADS
HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCEEEEEECC
GFESSAFLQGVRDLGFEFVVGVRSTRRTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARI
CCCHHHHHHHHHHCCHHEEEECHHCCCCCCCCCEEEECCCCCCEECCCCCCCHHHHHHHH
HRGERTFFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRFALRTAQGLDRWVLL
HCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
VFAAFTLSMLCRTDALSLEQAAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHC
CKT
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA