| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972259
Identifier: 94972259
GI number: 94972259
Start: 230938
End: 232029
Strand: Direct
Name: 94972259
Synonym: Dgeo_2793
Alternate gene names: NA
Gene position: 230938-232029 (Clockwise)
Preceding gene: 94972261
Following gene: 94972258
Centisome position: 40.22
GC content: 63.74
Gene sequence:
>1092_bases GTGTATGACCTCAAGCTTCGCGGGGAGCGCGCGTCCATTCTGGCAGACGCGCTGCTCTCTGTCCCCACCAGCCCTTACCA GAAGCGCAGCCTGGAGGCTGCGCTGGGCCTCTTTCTCGACCTGAAGACGAAAAAAGCGTTGCACTGGGCACACACGGTCA GTGCCAGTGCGCTGAGTCGCCTGCTGAACGTGGATGAGTGGGACACGTCCGCCTGCTGGGCGACCCTGGTCCAGGCCCAA TGGGACGCCCTGCTCCTCGCGGCACGGCGCAACCATCATCCTCGTTTGCGTCTGTGCGTGGACCTGACCAGCATCCCGAA AACGGGACGCGAGCTGCCCTTCGTTCGCGTCTATCACGAGGTCTACGGGATTCATCTGGTGGTGCTGTACGCGGTGTACG GGGACCTGAAGTTTCCTGTGGGCTACCGAGTGTACCGGGGGAAGGGGACCCCTTCCCCCGTCCGGCTCGCCCTGGAACTG CTGGCCAGCGTGCCCGCCGAGGTGAGCCGCCGCTTCGACGTCTGGGTGTTGGCGGACAGCGGCTTCGAATCGTCAGCCTT CCTGCAAGGCGTGCGGGACCTAGGCTTCGAGTTCGTGGTCGGGGTCCGTTCAACTCGCCGCACTGACCATCCCGGTCACG TCACGGTGGAGGACTGCGAACACGGGAGCTGGGTGAATCTCGCCAACTGGCCCTGGGACACCCTGACGCTGGCCCGGATT CACCGAGGAGAGCGCACCTTTTTCTCGGTGGCATCACAACTGCTCCCGGGCGACCTCGTCGCCCGGGAGGGAGCACGGCG CTGGGCTATTGAGTCGTTTTTCAAGGAGGCCAAGCATGGCTTCGGGTTGAATCGGTTCGCGTTGCGAACCGCTCAAGGGC TGGACCGCTGGGTGCTGCTGGTCTTCGCTGCCTTTACCTTGTCCATGCTCTGCCGAACCGATGCCTTGTCCCTGGAACAG GCAGCGGAAGTTGCGGCTCGGGTGGCTCTGCCACTGCTGGTCGTTCAGCGACTCGCGGTCCAGGTCTGGCGAGAGGAAGA ATTCCTGCGCCAGCACGGCTATTCACTGACCCTATCCAGGTGCAAGACCTAA
Upstream 100 bases:
>100_bases CGCTCAGTATTAGGAAGGCGGAGAAAACGAGTTGAGCCGCTCTCATCTCTTGCACCTGAAGAGGTAGCGAGAAGGCGCTC CCAGCCGCGAGAAAGAGGGT
Downstream 100 bases:
>100_bases GCTTAATGCTTTCTTAATCTTAAACTCATCTTCCTAGGAGGATAGCATCTTGGAAAAATTTCGCTATGAGAAGCAGTAAA ATCAGGATATGCAGGCAAAA
Product: transposase, IS4
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 363; Mature: 363
Protein sequence:
>363_residues MYDLKLRGERASILADALLSVPTSPYQKRSLEAALGLFLDLKTKKALHWAHTVSASALSRLLNVDEWDTSACWATLVQAQ WDALLLAARRNHHPRLRLCVDLTSIPKTGRELPFVRVYHEVYGIHLVVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALEL LASVPAEVSRRFDVWVLADSGFESSAFLQGVRDLGFEFVVGVRSTRRTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARI HRGERTFFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRFALRTAQGLDRWVLLVFAAFTLSMLCRTDALSLEQ AAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSRCKT
Sequences:
>Translated_363_residues MYDLKLRGERASILADALLSVPTSPYQKRSLEAALGLFLDLKTKKALHWAHTVSASALSRLLNVDEWDTSACWATLVQAQ WDALLLAARRNHHPRLRLCVDLTSIPKTGRELPFVRVYHEVYGIHLVVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALEL LASVPAEVSRRFDVWVLADSGFESSAFLQGVRDLGFEFVVGVRSTRRTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARI HRGERTFFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRFALRTAQGLDRWVLLVFAAFTLSMLCRTDALSLEQ AAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSRCKT >Mature_363_residues MYDLKLRGERASILADALLSVPTSPYQKRSLEAALGLFLDLKTKKALHWAHTVSASALSRLLNVDEWDTSACWATLVQAQ WDALLLAARRNHHPRLRLCVDLTSIPKTGRELPFVRVYHEVYGIHLVVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALEL LASVPAEVSRRFDVWVLADSGFESSAFLQGVRDLGFEFVVGVRSTRRTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARI HRGERTFFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRFALRTAQGLDRWVLLVFAAFTLSMLCRTDALSLEQ AAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSRCKT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40962; Mature: 40962
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYDLKLRGERASILADALLSVPTSPYQKRSLEAALGLFLDLKTKKALHWAHTVSASALSR CCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNVDEWDTSACWATLVQAQWDALLLAARRNHHPRLRLCVDLTSIPKTGRELPFVRVYHE HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHCCCCCCCCCHHHHHHH VYGIHLVVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALELLASVPAEVSRRFDVWVLADS HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCEEEEEECC GFESSAFLQGVRDLGFEFVVGVRSTRRTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARI CCCHHHHHHHHHHCCHHEEEECHHCCCCCCCCCEEEECCCCCCEECCCCCCCHHHHHHHH HRGERTFFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRFALRTAQGLDRWVLL HCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VFAAFTLSMLCRTDALSLEQAAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHC CKT CCC >Mature Secondary Structure MYDLKLRGERASILADALLSVPTSPYQKRSLEAALGLFLDLKTKKALHWAHTVSASALSR CCCCEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLNVDEWDTSACWATLVQAQWDALLLAARRNHHPRLRLCVDLTSIPKTGRELPFVRVYHE HHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEHHCCCCCCCCCHHHHHHH VYGIHLVVLYAVYGDLKFPVGYRVYRGKGTPSPVRLALELLASVPAEVSRRFDVWVLADS HHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCEEEEEECC GFESSAFLQGVRDLGFEFVVGVRSTRRTDHPGHVTVEDCEHGSWVNLANWPWDTLTLARI CCCHHHHHHHHHHCCHHEEEECHHCCCCCCCCCEEEECCCCCCEECCCCCCCHHHHHHHH HRGERTFFSVASQLLPGDLVAREGARRWAIESFFKEAKHGFGLNRFALRTAQGLDRWVLL HCCCHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VFAAFTLSMLCRTDALSLEQAAEVAARVALPLLVVQRLAVQVWREEEFLRQHGYSLTLSR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHC CKT CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA