| Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
|---|---|
| Accession | NC_008010 |
| Length | 574,127 |
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The map label for this gene is 94972258
Identifier: 94972258
GI number: 94972258
Start: 232199
End: 233083
Strand: Direct
Name: 94972258
Synonym: Dgeo_2792
Alternate gene names: NA
Gene position: 232199-233083 (Clockwise)
Preceding gene: 94972259
Following gene: 94972256
Centisome position: 40.44
GC content: 41.36
Gene sequence:
>885_bases TTGGCCCAGGCGCTCACATCGCTTTCATTCAAAGGGACAATTAGTACGGAAGTCTTGACAGATACAAGCGCCCTCATTGT CAAGTATTCCAGGGGAATAAACAACATATGCGAAGTCGCTCTACCTACCCTTAAGAGTATAAGATGCTTGTCGGTTATGG ATAACCGCAATCTTATAGTAGACAGCAATAGGATGGGCACTGCTGTAATTATGAATGGATCATCTGGCATGCTGGTATGG CGCTCCGGCAAGCCAGCAAGAAGACTACCACTAATTTATGATTGGACAAGAATAAGTGATGACGGTAATTCTTTTCTACA TAGCGGCTTGAAGACCTTAGAGCAACGCTCGATCAACGGAATCCTGATAAAAGCAATTCCGATTGGCCTTATGGGCACGA TCTCAAGAGGGGCACAAATATTTGACTACTCTCTTAGTAATGGAAGCATCTATGTGAGCAATTTAAACGGCTTATATATT TTCAATGATAAAGGCGGTACACGGGAATTCAAAACTACTCAACCATTGAGATCTTTCAAAATTTCCAGAGGATTAGTCGT AGCGGTTAGTAATAGTTTTCTCAAGATTATATCTATGAAAGAGAACAGCCTAAGAGATAAGGCATCTATTAAAATCTCAA GACAGGCTCTTTTAGGTCAGTCCACGTTCGATATTTGTGGAAACTACATTCTTACAACCCTTGACGGCCAATCAATAAGT CTTCTAGATTTTTCTCTGACAACAAAGAGGAGATTTGTGATTCCTGAAAAATTTACTGTTGCGAGTCTATCTTGCACAAA AAACGGCGCCATCGGCCTTGTCCTATTACAGAAAACCCCTCTAACAGAGGATGAGGTGCGTCTACAGGTTTTGCAGCTCA GATAA
Upstream 100 bases:
>100_bases GAAGCAGTAAAATCAGGATATGCAGGCAAAAATTAATAGTAGCCCCTGGTGGCTCGCCACTAAAGTACTTTAGTACACTG CCCTGCTTCTGAGTAGTGCC
Downstream 100 bases:
>100_bases CTAGCCTACGAGTACTGGATTAGGTATCCTGTCCACATATAATCACCCCTCAAAGCACGAGGCGCAGTAACTGGCTCTAG TTGACCGCGATACTCTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MAQALTSLSFKGTISTEVLTDTSALIVKYSRGINNICEVALPTLKSIRCLSVMDNRNLIVDSNRMGTAVIMNGSSGMLVW RSGKPARRLPLIYDWTRISDDGNSFLHSGLKTLEQRSINGILIKAIPIGLMGTISRGAQIFDYSLSNGSIYVSNLNGLYI FNDKGGTREFKTTQPLRSFKISRGLVVAVSNSFLKIISMKENSLRDKASIKISRQALLGQSTFDICGNYILTTLDGQSIS LLDFSLTTKRRFVIPEKFTVASLSCTKNGAIGLVLLQKTPLTEDEVRLQVLQLR
Sequences:
>Translated_294_residues MAQALTSLSFKGTISTEVLTDTSALIVKYSRGINNICEVALPTLKSIRCLSVMDNRNLIVDSNRMGTAVIMNGSSGMLVW RSGKPARRLPLIYDWTRISDDGNSFLHSGLKTLEQRSINGILIKAIPIGLMGTISRGAQIFDYSLSNGSIYVSNLNGLYI FNDKGGTREFKTTQPLRSFKISRGLVVAVSNSFLKIISMKENSLRDKASIKISRQALLGQSTFDICGNYILTTLDGQSIS LLDFSLTTKRRFVIPEKFTVASLSCTKNGAIGLVLLQKTPLTEDEVRLQVLQLR >Mature_293_residues AQALTSLSFKGTISTEVLTDTSALIVKYSRGINNICEVALPTLKSIRCLSVMDNRNLIVDSNRMGTAVIMNGSSGMLVWR SGKPARRLPLIYDWTRISDDGNSFLHSGLKTLEQRSINGILIKAIPIGLMGTISRGAQIFDYSLSNGSIYVSNLNGLYIF NDKGGTREFKTTQPLRSFKISRGLVVAVSNSFLKIISMKENSLRDKASIKISRQALLGQSTFDICGNYILTTLDGQSISL LDFSLTTKRRFVIPEKFTVASLSCTKNGAIGLVLLQKTPLTEDEVRLQVLQLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32338; Mature: 32207
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQALTSLSFKGTISTEVLTDTSALIVKYSRGINNICEVALPTLKSIRCLSVMDNRNLIV CCCCCCCEEECCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHEEEEEEECCCCEEE DSNRMGTAVIMNGSSGMLVWRSGKPARRLPLIYDWTRISDDGNSFLHSGLKTLEQRSING ECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCE ILIKAIPIGLMGTISRGAQIFDYSLSNGSIYVSNLNGLYIFNDKGGTREFKTTQPLRSFK EEEEEECCCEEEHHCCCCEEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCCCCHHHHC ISRGLVVAVSNSFLKIISMKENSLRDKASIKISRQALLGQSTFDICGNYILTTLDGQSIS CCCCEEEEECCCEEEEEEECCCCCCCCCEEEEEHHHHCCCCHHHHCCCEEEEEECCCEEE LLDFSLTTKRRFVIPEKFTVASLSCTKNGAIGLVLLQKTPLTEDEVRLQVLQLR EEEEEECCCEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCHHEEEEEEEEC >Mature Secondary Structure AQALTSLSFKGTISTEVLTDTSALIVKYSRGINNICEVALPTLKSIRCLSVMDNRNLIV CCCCCCEEECCEEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHEEEEEEECCCCEEE DSNRMGTAVIMNGSSGMLVWRSGKPARRLPLIYDWTRISDDGNSFLHSGLKTLEQRSING ECCCCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCE ILIKAIPIGLMGTISRGAQIFDYSLSNGSIYVSNLNGLYIFNDKGGTREFKTTQPLRSFK EEEEEECCCEEEHHCCCCEEEEEEECCCEEEEEECCEEEEECCCCCCCCCCCCCCHHHHC ISRGLVVAVSNSFLKIISMKENSLRDKASIKISRQALLGQSTFDICGNYILTTLDGQSIS CCCCEEEEECCCEEEEEEECCCCCCCCCEEEEEHHHHCCCCHHHHCCCEEEEEECCCEEE LLDFSLTTKRRFVIPEKFTVASLSCTKNGAIGLVLLQKTPLTEDEVRLQVLQLR EEEEEECCCEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCCHHEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA