Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
---|---|
Accession | NC_008010 |
Length | 574,127 |
Click here to switch to the map view.
The map label for this gene is 94972233
Identifier: 94972233
GI number: 94972233
Start: 258907
End: 259314
Strand: Direct
Name: 94972233
Synonym: Dgeo_2766
Alternate gene names: NA
Gene position: 258907-259314 (Clockwise)
Preceding gene: 94972244
Following gene: 94972232
Centisome position: 45.1
GC content: 67.4
Gene sequence:
>408_bases ATGCCCACGGCTGCCCAGGAAGGCACAACACTCCACCGCACGTTCATCCGCGATGCTTATGGCGAGACCTGGACCGACGA ATTGGAGGGACGCCCCGTTCACAACGGCGCGCTGCTGGAGTTGCTGGTGCGGGGCCGCTGGGTGCCTGTGCTGTACCTGC GGGACTCCTACACATCGGGGGAAGGCCCGCGAGCGTCCTTGCACTACCGGAAGTCGAAGCGGAGCGTGCCCCTCGTGCTC GACGGGATGCACCTGCGCTGGCCGCCTCCTGCCCCTCCCAAGCCTGTCCTCCCGTATTATACGTGGTGGGGGGACCTCCC CGAGGGGTGGGTCACCAAGACCGCCCTACACGCTGAGGGCTTGAAGCCCGGGGGCGAGCCGGTGGCGACGATCCGTTATG GCCGCTGA
Upstream 100 bases:
>100_bases GGGATAGTCCCTATCTATAACAAATTAGGTCGTTTTTCCGCTTCTCCACGCTCTTTTCTTTTTGCGAACCTGTGTTACCT GTGGGTGTGAGGAGGGACCC
Downstream 100 bases:
>100_bases GGACACTACCAGGAGACCGTGGTGTACGACCGCGCGCAGGCTGTGCCGAGGAAGGCGGTCACGCCTGCTCAGCTCGCGGC GTTGGAGAAAGCCCAGGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MPTAAQEGTTLHRTFIRDAYGETWTDELEGRPVHNGALLELLVRGRWVPVLYLRDSYTSGEGPRASLHYRKSKRSVPLVL DGMHLRWPPPAPPKPVLPYYTWWGDLPEGWVTKTALHAEGLKPGGEPVATIRYGR
Sequences:
>Translated_135_residues MPTAAQEGTTLHRTFIRDAYGETWTDELEGRPVHNGALLELLVRGRWVPVLYLRDSYTSGEGPRASLHYRKSKRSVPLVL DGMHLRWPPPAPPKPVLPYYTWWGDLPEGWVTKTALHAEGLKPGGEPVATIRYGR >Mature_134_residues PTAAQEGTTLHRTFIRDAYGETWTDELEGRPVHNGALLELLVRGRWVPVLYLRDSYTSGEGPRASLHYRKSKRSVPLVLD GMHLRWPPPAPPKPVLPYYTWWGDLPEGWVTKTALHAEGLKPGGEPVATIRYGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15240; Mature: 15108
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTAAQEGTTLHRTFIRDAYGETWTDELEGRPVHNGALLELLVRGRWVPVLYLRDSYTSG CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCC EGPRASLHYRKSKRSVPLVLDGMHLRWPPPAPPKPVLPYYTWWGDLPEGWVTKTALHAEG CCCCCEEEECCCCCCCCEEECCCEEECCCCCCCCCCCCCEECCCCCCCCHHHHHHHCCCC LKPGGEPVATIRYGR CCCCCCEEEEEEECC >Mature Secondary Structure PTAAQEGTTLHRTFIRDAYGETWTDELEGRPVHNGALLELLVRGRWVPVLYLRDSYTSG CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCEEEEEEECCCCCC EGPRASLHYRKSKRSVPLVLDGMHLRWPPPAPPKPVLPYYTWWGDLPEGWVTKTALHAEG CCCCCEEEECCCCCCCCEEECCCEEECCCCCCCCCCCCCEECCCCCCCCHHHHHHHCCCC LKPGGEPVATIRYGR CCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA