Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
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Accession | NC_008010 |
Length | 574,127 |
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The map label for this gene is 94972231
Identifier: 94972231
GI number: 94972231
Start: 259720
End: 260082
Strand: Direct
Name: 94972231
Synonym: Dgeo_2764
Alternate gene names: NA
Gene position: 259720-260082 (Clockwise)
Preceding gene: 94972232
Following gene: 94972230
Centisome position: 45.24
GC content: 67.22
Gene sequence:
>363_bases TTGAGCGGGGCGCCGAGCTGGCCTGAGGTGTACGCGCAGCTCGTGTCGCTCCTGGAGGGCCGTGAGCTGGTGGCCTGGAA CGCCGCCTTTGACTGTCGGGTGCTGCGGCGGTCGAGCGCCTTGCACGGCCTGGCCTTCCCAGAGCTGACCTGGCACTGCG CGATGACGTGGGGCGCCCCGATCTGGGGCGAGTATTCGGAGTATCACGGTGATTTCCGGTGGGTGAGTCTGGACGAGGCG TGCTGGAGCGAGGGTGTGTGCCTGGACGCTCGGCACCACCGGGCTGCGGGTGATGGCTGCCGTTTGAGTGCGTTGATGAA CGCGGTGGCACAGGCGGCAACGCAAAAGGGCAACCTCTCCTGA
Upstream 100 bases:
>100_bases GGTCTCCCCCATTGGCGAGGTCCTGTTCGAGTCGCTGGTGCGCCCGCTCGGCCCGGTGAGTGAGTGAGCGCGGGCGGTCC ACGGCATCACGGACGAAGAG
Downstream 100 bases:
>100_bases AAAAGAAGTTGCCTCATCCTTGGGACTATCGGGCGTACTTGGTCGCAGTCACTCAGAACTTGCACCTGAAGAGGTAGCCA AAAAGCGCTCCCAGACGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Transposase; Orf81 Bacteriophage
Number of amino acids: Translated: 120; Mature: 119
Protein sequence:
>120_residues MSGAPSWPEVYAQLVSLLEGRELVAWNAAFDCRVLRRSSALHGLAFPELTWHCAMTWGAPIWGEYSEYHGDFRWVSLDEA CWSEGVCLDARHHRAAGDGCRLSALMNAVAQAATQKGNLS
Sequences:
>Translated_120_residues MSGAPSWPEVYAQLVSLLEGRELVAWNAAFDCRVLRRSSALHGLAFPELTWHCAMTWGAPIWGEYSEYHGDFRWVSLDEA CWSEGVCLDARHHRAAGDGCRLSALMNAVAQAATQKGNLS >Mature_119_residues SGAPSWPEVYAQLVSLLEGRELVAWNAAFDCRVLRRSSALHGLAFPELTWHCAMTWGAPIWGEYSEYHGDFRWVSLDEAC WSEGVCLDARHHRAAGDGCRLSALMNAVAQAATQKGNLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13251; Mature: 13120
Theoretical pI: Translated: 5.97; Mature: 5.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGAPSWPEVYAQLVSLLEGRELVAWNAAFDCRVLRRSSALHGLAFPELTWHCAMTWGAP CCCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC IWGEYSEYHGDFRWVSLDEACWSEGVCLDARHHRAAGDGCRLSALMNAVAQAATQKGNLS CCCCHHHHCCCEEEEEECHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SGAPSWPEVYAQLVSLLEGRELVAWNAAFDCRVLRRSSALHGLAFPELTWHCAMTWGAP CCCCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCCCCCCCCEEEEEECCCCC IWGEYSEYHGDFRWVSLDEACWSEGVCLDARHHRAAGDGCRLSALMNAVAQAATQKGNLS CCCCHHHHCCCEEEEEECHHHCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA