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The map label for this gene is ugpB [H]

Identifier: 94972193

GI number: 94972193

Start: 301262

End: 302575

Strand: Direct

Name: ugpB [H]

Synonym: Dgeo_2726

Alternate gene names: 94972193

Gene position: 301262-302575 (Clockwise)

Preceding gene: 94972194

Following gene: 94972192

Centisome position: 52.47

GC content: 64.16

Gene sequence:

>1314_bases
ATGCCCCGCTCTCTTTGCCGGACTGCCCTGCTGGCCCTGCTCGCCCTGGGAGGCGCGGGTGCCCAGACCTACACCGGGCC
CAAGGTCACCCTCACCTTCCTGCATGGCTTTACTGGCCCCGACCGGCCCGTGATGGAAGGGCTGATCAAGAAGTTCAACG
ACACACACCCCAATATCCAGGTGCGTGCGCAGGCGCAGCCCTGGGGGACCACCTGGCAGCAATTGCCCTCGCTGGTCGCC
TCGGGCCGCGCGCCGGATGTGGTGGTGATCAACGAAGACCAGATCACCGGCTTTATCGCCCGCGGGGCGGTGTCGCCCCT
CAGCCCCAGCGAGCTGAAAGCCGCCGGAATTGACCGGAGCCGCTTTTTCGGCCCGCTGTTCGCCACCGCCGACTACAAGG
GTCAGTCGTACGGCGTGCCGGTATCGAGCGTGGCGTATGTGATGTTCTACAACAAGGATCTGATGAAAAAGGTCGGCCTG
GATCCCAACAAGCCGCCCCGCACCCGCGCCGATTTCCTGGCGGCAGTGCAGAAATGCACGGTGGACAAAACCGGCAAGAA
CGCGACCCAGGCGGGCTTTGATCCCAAGAACCTCGACACCTGGGGTGTCAGCCTCTACAACAACTGGGTGGGCGCGCGCG
CGGCCTACGCCGCCATCCTGCAAAACGGCGGAGCGATGGTGGATCAGAAGGAAAATGCGGCCTTCAATTCACCGCAGGCG
ATCAGCGCGGTGCAGTTTCTGGTGGACCTGGTGCAAAAGGACCATGTCGCGCGACCCAACAGCACCGAGGAGGCCGAGCT
GGCAGCCTTTAGCCAGGGCAAAGTCTGCTTCTTCCCCAGCGGGCAGTGGTATCTCGACCGCTTCAAGGGACAGAAGCTGA
ATTTCGGCGTGACCTTTCTGCCGCGGATCGGCGGCAACGTGCGCGATGCGGCCTGGGGTGGATCGAGCCACCTCACCCTG
CCCAAGCAGCGCGCCGGCTACGACGCCAACAAGCGTCAGGCCGCCCTGGTCTTCATGTCGTGGCTGACGCAGCCCGCGCA
GAACCTCACCTGGACCAGCACCGGCAGCCTGCCGACGCAGCCCGCGGTGGCGAAAAACCCGCAGTTTGCCAACAACCCGA
TCAGCGGCGTCTTCGACCGCCTGAGCAGCGTCTACGCGACCAGCGGCTACCCCTGGGTCGGGCAGGTGATGTCGCCCTTT
GATCAGGCTTGGGAAGCCGCCTACTTGGGCAAAAAGACCGTCGCGCAGGCACTGAATGACGGTGTACGCGAGGCGAACAA
GCAGATCGAGCAGGCCCGCAAGAACTTCCAGTAA

Upstream 100 bases:

>100_bases
CACCTCTGTCTAGACCGCTGTACCGTTCGCTCGCCGGTTGTCCAGCCCTGCTTGTCCGCCGCCGCGGCTTCGGGCCGTCT
CTCCCACTCAGGAGGTTCTC

Downstream 100 bases:

>100_bases
GTCTGCCGAGCGGCCTGGCCCCCACTCCAGCCAGGGGTGAACGCGGGGCTGGGCCAGCTTCCCTTCTCCCCTGCCTGCGC
GAGGTATCCCGCATGACCGT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MPRSLCRTALLALLALGGAGAQTYTGPKVTLTFLHGFTGPDRPVMEGLIKKFNDTHPNIQVRAQAQPWGTTWQQLPSLVA
SGRAPDVVVINEDQITGFIARGAVSPLSPSELKAAGIDRSRFFGPLFATADYKGQSYGVPVSSVAYVMFYNKDLMKKVGL
DPNKPPRTRADFLAAVQKCTVDKTGKNATQAGFDPKNLDTWGVSLYNNWVGARAAYAAILQNGGAMVDQKENAAFNSPQA
ISAVQFLVDLVQKDHVARPNSTEEAELAAFSQGKVCFFPSGQWYLDRFKGQKLNFGVTFLPRIGGNVRDAAWGGSSHLTL
PKQRAGYDANKRQAALVFMSWLTQPAQNLTWTSTGSLPTQPAVAKNPQFANNPISGVFDRLSSVYATSGYPWVGQVMSPF
DQAWEAAYLGKKTVAQALNDGVREANKQIEQARKNFQ

Sequences:

>Translated_437_residues
MPRSLCRTALLALLALGGAGAQTYTGPKVTLTFLHGFTGPDRPVMEGLIKKFNDTHPNIQVRAQAQPWGTTWQQLPSLVA
SGRAPDVVVINEDQITGFIARGAVSPLSPSELKAAGIDRSRFFGPLFATADYKGQSYGVPVSSVAYVMFYNKDLMKKVGL
DPNKPPRTRADFLAAVQKCTVDKTGKNATQAGFDPKNLDTWGVSLYNNWVGARAAYAAILQNGGAMVDQKENAAFNSPQA
ISAVQFLVDLVQKDHVARPNSTEEAELAAFSQGKVCFFPSGQWYLDRFKGQKLNFGVTFLPRIGGNVRDAAWGGSSHLTL
PKQRAGYDANKRQAALVFMSWLTQPAQNLTWTSTGSLPTQPAVAKNPQFANNPISGVFDRLSSVYATSGYPWVGQVMSPF
DQAWEAAYLGKKTVAQALNDGVREANKQIEQARKNFQ
>Mature_436_residues
PRSLCRTALLALLALGGAGAQTYTGPKVTLTFLHGFTGPDRPVMEGLIKKFNDTHPNIQVRAQAQPWGTTWQQLPSLVAS
GRAPDVVVINEDQITGFIARGAVSPLSPSELKAAGIDRSRFFGPLFATADYKGQSYGVPVSSVAYVMFYNKDLMKKVGLD
PNKPPRTRADFLAAVQKCTVDKTGKNATQAGFDPKNLDTWGVSLYNNWVGARAAYAAILQNGGAMVDQKENAAFNSPQAI
SAVQFLVDLVQKDHVARPNSTEEAELAAFSQGKVCFFPSGQWYLDRFKGQKLNFGVTFLPRIGGNVRDAAWGGSSHLTLP
KQRAGYDANKRQAALVFMSWLTQPAQNLTWTSTGSLPTQPAVAKNPQFANNPISGVFDRLSSVYATSGYPWVGQVMSPFD
QAWEAAYLGKKTVAQALNDGVREANKQIEQARKNFQ

Specific function: sn-glycerol-3-phosphate and glycerophosphoryl diester- binding protein interacts with the binding protein-dependent transport system ugpACE [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=447, Percent_Identity=23.489932885906, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059
- InterPro:   IPR006061 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47471; Mature: 47340

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS01037 SBP_BACTERIAL_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSLCRTALLALLALGGAGAQTYTGPKVTLTFLHGFTGPDRPVMEGLIKKFNDTHPNIQ
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEE
VRAQAQPWGTTWQQLPSLVASGRAPDVVVINEDQITGFIARGAVSPLSPSELKAAGIDRS
EEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCHHHHHHHCCCHH
RFFGPLFATADYKGQSYGVPVSSVAYVMFYNKDLMKKVGLDPNKPPRTRADFLAAVQKCT
HHCCCHHEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
VDKTGKNATQAGFDPKNLDTWGVSLYNNWVGARAAYAAILQNGGAMVDQKENAAFNSPQA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHH
ISAVQFLVDLVQKDHVARPNSTEEAELAAFSQGKVCFFPSGQWYLDRFKGQKLNFGVTFL
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEECCCCHHHHHHCCCEECCCEEEC
PRIGGNVRDAAWGGSSHLTLPKQRAGYDANKRQAALVFMSWLTQPAQNLTWTSTGSLPTQ
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCHHHCCEEECCCCCCCC
PAVAKNPQFANNPISGVFDRLSSVYATSGYPWVGQVMSPFDQAWEAAYLGKKTVAQALND
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVREANKQIEQARKNFQ
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PRSLCRTALLALLALGGAGAQTYTGPKVTLTFLHGFTGPDRPVMEGLIKKFNDTHPNIQ
CHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCEE
VRAQAQPWGTTWQQLPSLVASGRAPDVVVINEDQITGFIARGAVSPLSPSELKAAGIDRS
EEEECCCCCCHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHCCCCCCCHHHHHHHCCCHH
RFFGPLFATADYKGQSYGVPVSSVAYVMFYNKDLMKKVGLDPNKPPRTRADFLAAVQKCT
HHCCCHHEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHC
VDKTGKNATQAGFDPKNLDTWGVSLYNNWVGARAAYAAILQNGGAMVDQKENAAFNSPQA
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHH
ISAVQFLVDLVQKDHVARPNSTEEAELAAFSQGKVCFFPSGQWYLDRFKGQKLNFGVTFL
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCEEEECCCCHHHHHHCCCEECCCEEEC
PRIGGNVRDAAWGGSSHLTLPKQRAGYDANKRQAALVFMSWLTQPAQNLTWTSTGSLPTQ
CCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHCCHHHCCEEECCCCCCCC
PAVAKNPQFANNPISGVFDRLSSVYATSGYPWVGQVMSPFDQAWEAAYLGKKTVAQALND
CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVREANKQIEQARKNFQ
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA