Definition | Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence. |
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Accession | NC_008010 |
Length | 574,127 |
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The map label for this gene is nasC [H]
Identifier: 94971859
GI number: 94971859
Start: 99901
End: 102030
Strand: Direct
Name: nasC [H]
Synonym: Dgeo_2390
Alternate gene names: 94971859
Gene position: 99901-102030 (Clockwise)
Preceding gene: 94971864
Following gene: 94971858
Centisome position: 17.4
GC content: 66.67
Gene sequence:
>2130_bases ATGCCGAGCACCCCCACTCCCCGGCGCGCGTCAGCCACACGCGTGGTGCGGACAACTTGTCCATATTGCGCAGTCCAGTG CAACTTCGACCTACAGATCGAGGACAACCTGCCCGTCAAGGCGACACCGACCAAGGAATGCCCCGTGGCCCACGGCACCG TCTGTAAGAAGGGGCTCTCCGCCCTGAATGACCTGCGTCACCCTGACCGCCTGACTCAGCCCCTGCTCCGCGAGAATGGC GAACTTGTGCCTGTGAGCTGGACTGAGGCGTTGGCCTACGTGTCGGACGCGCTGGGGCCCCTCCTCGCTACGCAGCCAAC TGCGGTGGGCGTATTGGGCAGCGGCGCGCTGACAAACGAAAAAACTTACCTGCTAGGTAAGTTCGCCCGCCTGGCGCTGA GAACGGCAAATATTGACTACAACGGGCGCTATTGCATGTCCTCGGCTGCCACAGCGCTGAACCGCACGGTGGGCTATGAC CGGGGCCTGGGCTTTCCGCTGGAGGAGATCAGTACAAGTGACCTGATCCTGCTCGTGGGCGCGAACATCGCCGAGACGCT GCCGCCGGTGATGCAGTACCTCAAGCGGGCGCGAGACCGGGGCGCGACCGTGTACGCCATCGATCCGCGTGCTACCCCGA CGGCGAAGGTGGCCGGGCATCACCTTGCTGTCCGCCCCGGCACCGACGGCATCCTTGCGCTTGGCCTGCTGCACCTGATG AAGGCGTGGGGGCGCATTCGCCCGACTGCCCCCGCCCACGGCATGCCGGAGGTGCTGTGGCAGGCCGACGACTACCCGCC CGCCTCTGTGGCCAGCGCGTGCGGTGTCGCAGAAGACGAGCTGATGACCCTAGCGAAGCTCTACGCCAACGCTCATAAGC CGCTGATCCTGACTGGACGCGGTCCCGAACAGCATGCCTACGGCACCGATACCGTCCAGGCTTACCTGAATCTCGCTTTC CTGACCGGGCACTTCGGCAAGCCGGGCGGCGGCTACGGCACGCTCACCGGGCAGGGCAACGGCCAGGGGGGGCGTGAGCA CGGGCAGAAGGCGGACCAGCTTCCCGGCGCGCGCAGCCTGCGCAATCCCAAACACCGCAGGGAGATCGCCGCCCTGTGGG GGTGCTTACCCGAGGACCTGCCTCAACCCGGCCTGAGCGCCCAAGAGTTGCTCAATGCCTGCGGTGAGGCGGGCGGCATT GAAGCTTTGATTGTGCTGGGATCGAACCCCATCGTCAGCGCGCCCGGAGCCCTGCAGGTTCGTCAACGCCTCAGTGCCCT CAAGCACCTCATCGTCATTGACGTTCTGCCCAGTGAGACCGCACAGCTTGCCACACTCGTCCTCCCCGGCTCCATGTGGT GCGAGGAGGAGGGCACAACCACCAACCTCGAAGGCCGGGTACAGCGCCGGCGCCAGGCAATCACTCCCCCCGCTGCGGCC CGTGAAGACTGGCGCATCCTCTGCGACCTGGCCGCAGCGATTGGGCGCCCTCAGGGATTCACCTACGCCACCTTCCGTGA GCTTCAGGATGAATTCTTCCGTGCAACAGGGGGCGGCGTGGCTGACTACAGCGGCCTCAGCGCTGAACGCCTCGATCGGG CAAGCGCCCAGTGGCCCGTTCGCAGTGCCGACGGTCCCGACACTCCCTACGCCTACGCGCCGAAGTACCCGACACCGGAC GGCCTCGCCAGGCTACACGTCCCGAGCTTTCCGCCGCTCCCTTTGTCCCACCACCTGCTCCTCACGACTGGGCGGCTGGG CAACCAATACCAGAGTGGCACCCAGACCCGCCGCAATCCCGCTCTGCGGGCCACCCTCGAACTCCAGGTTCACCCAGAGA CGGCCCGTGAGCGCAGCCTGAAACCCGGCGACCTCGCCCGCGTGACCACCTCGCACGGCACACTCGACCTGCCCGTCGCG CTCAACCCCGGCCTGCGTCCCGACACCTTGTTCATGCCCTTCCACTGGGAAGCAAGCGCGAACCTGCTGACCAGCCCTGA TCGCCTCGATCCCCACTCGCGGATGCCCGCCTTCAAGGCGACGCCCGCCACCCTCATGCCCGTTCCCGTCTCCGTTCCTG AAGCGCAGCCCGCCCGAATCGCCCCGCTGGAGGGGGGAGTGCCTATCTGA
Upstream 100 bases:
>100_bases TCGGATATTTGTGGCCTATACTTGCAACTTGTCTAAAAATTTGGAAACAAATTGCATTTTTGGCCTTGACGACCCTGTCG ATCCCTGCCAAGGTGCGCGC
Downstream 100 bases:
>100_bases CCGCTTCCCCTCCTGCCCCCAGGCCCTCACTCCTTCCCCCGAGGTTCCCCCATGACCCAGCCTGCCAACATCCCGCTTCC CGCTCCCGCCCTCACCGCCG
Product: molybdopterin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 709; Mature: 708
Protein sequence:
>709_residues MPSTPTPRRASATRVVRTTCPYCAVQCNFDLQIEDNLPVKATPTKECPVAHGTVCKKGLSALNDLRHPDRLTQPLLRENG ELVPVSWTEALAYVSDALGPLLATQPTAVGVLGSGALTNEKTYLLGKFARLALRTANIDYNGRYCMSSAATALNRTVGYD RGLGFPLEEISTSDLILLVGANIAETLPPVMQYLKRARDRGATVYAIDPRATPTAKVAGHHLAVRPGTDGILALGLLHLM KAWGRIRPTAPAHGMPEVLWQADDYPPASVASACGVAEDELMTLAKLYANAHKPLILTGRGPEQHAYGTDTVQAYLNLAF LTGHFGKPGGGYGTLTGQGNGQGGREHGQKADQLPGARSLRNPKHRREIAALWGCLPEDLPQPGLSAQELLNACGEAGGI EALIVLGSNPIVSAPGALQVRQRLSALKHLIVIDVLPSETAQLATLVLPGSMWCEEEGTTTNLEGRVQRRRQAITPPAAA REDWRILCDLAAAIGRPQGFTYATFRELQDEFFRATGGGVADYSGLSAERLDRASAQWPVRSADGPDTPYAYAPKYPTPD GLARLHVPSFPPLPLSHHLLLTTGRLGNQYQSGTQTRRNPALRATLELQVHPETARERSLKPGDLARVTTSHGTLDLPVA LNPGLRPDTLFMPFHWEASANLLTSPDRLDPHSRMPAFKATPATLMPVPVSVPEAQPARIAPLEGGVPI
Sequences:
>Translated_709_residues MPSTPTPRRASATRVVRTTCPYCAVQCNFDLQIEDNLPVKATPTKECPVAHGTVCKKGLSALNDLRHPDRLTQPLLRENG ELVPVSWTEALAYVSDALGPLLATQPTAVGVLGSGALTNEKTYLLGKFARLALRTANIDYNGRYCMSSAATALNRTVGYD RGLGFPLEEISTSDLILLVGANIAETLPPVMQYLKRARDRGATVYAIDPRATPTAKVAGHHLAVRPGTDGILALGLLHLM KAWGRIRPTAPAHGMPEVLWQADDYPPASVASACGVAEDELMTLAKLYANAHKPLILTGRGPEQHAYGTDTVQAYLNLAF LTGHFGKPGGGYGTLTGQGNGQGGREHGQKADQLPGARSLRNPKHRREIAALWGCLPEDLPQPGLSAQELLNACGEAGGI EALIVLGSNPIVSAPGALQVRQRLSALKHLIVIDVLPSETAQLATLVLPGSMWCEEEGTTTNLEGRVQRRRQAITPPAAA REDWRILCDLAAAIGRPQGFTYATFRELQDEFFRATGGGVADYSGLSAERLDRASAQWPVRSADGPDTPYAYAPKYPTPD GLARLHVPSFPPLPLSHHLLLTTGRLGNQYQSGTQTRRNPALRATLELQVHPETARERSLKPGDLARVTTSHGTLDLPVA LNPGLRPDTLFMPFHWEASANLLTSPDRLDPHSRMPAFKATPATLMPVPVSVPEAQPARIAPLEGGVPI >Mature_708_residues PSTPTPRRASATRVVRTTCPYCAVQCNFDLQIEDNLPVKATPTKECPVAHGTVCKKGLSALNDLRHPDRLTQPLLRENGE LVPVSWTEALAYVSDALGPLLATQPTAVGVLGSGALTNEKTYLLGKFARLALRTANIDYNGRYCMSSAATALNRTVGYDR GLGFPLEEISTSDLILLVGANIAETLPPVMQYLKRARDRGATVYAIDPRATPTAKVAGHHLAVRPGTDGILALGLLHLMK AWGRIRPTAPAHGMPEVLWQADDYPPASVASACGVAEDELMTLAKLYANAHKPLILTGRGPEQHAYGTDTVQAYLNLAFL TGHFGKPGGGYGTLTGQGNGQGGREHGQKADQLPGARSLRNPKHRREIAALWGCLPEDLPQPGLSAQELLNACGEAGGIE ALIVLGSNPIVSAPGALQVRQRLSALKHLIVIDVLPSETAQLATLVLPGSMWCEEEGTTTNLEGRVQRRRQAITPPAAAR EDWRILCDLAAAIGRPQGFTYATFRELQDEFFRATGGGVADYSGLSAERLDRASAQWPVRSADGPDTPYAYAPKYPTPDG LARLHVPSFPPLPLSHHLLLTTGRLGNQYQSGTQTRRNPALRATLELQVHPETARERSLKPGDLARVTTSHGTLDLPVAL NPGLRPDTLFMPFHWEASANLLTSPDRLDPHSRMPAFKATPATLMPVPVSVPEAQPARIAPLEGGVPI
Specific function: Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria [H]
COG id: COG0243
COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI3868721, Length=698, Percent_Identity=28.3667621776504, Blast_Score=280, Evalue=2e-76, Organism=Escherichia coli, GI1788534, Length=799, Percent_Identity=27.2841051314143, Blast_Score=199, Evalue=4e-52, Organism=Escherichia coli, GI1787870, Length=505, Percent_Identity=24.5544554455446, Blast_Score=95, Evalue=2e-20, Organism=Escherichia coli, GI171474008, Length=515, Percent_Identity=25.4368932038835, Blast_Score=92, Evalue=8e-20, Organism=Escherichia coli, GI87081797, Length=751, Percent_Identity=22.9027962716378, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI1787778, Length=388, Percent_Identity=27.0618556701031, Blast_Score=85, Evalue=2e-17, Organism=Escherichia coli, GI3868720, Length=256, Percent_Identity=28.515625, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI3868719, Length=278, Percent_Identity=25.1798561151079, Blast_Score=77, Evalue=5e-15, Organism=Escherichia coli, GI87081994, Length=513, Percent_Identity=23.0019493177388, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009010 - InterPro: IPR006657 - InterPro: IPR006656 - InterPro: IPR006963 - InterPro: IPR006655 [H]
Pfam domain/function: PF04879 Molybdop_Fe4S4; PF00384 Molybdopterin; PF01568 Molydop_binding [H]
EC number: =1.7.99.4 [H]
Molecular weight: Translated: 76057; Mature: 75925
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: PS00551 MOLYBDOPTERIN_PROK_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSTPTPRRASATRVVRTTCPYCAVQCNFDLQIEDNLPVKATPTKECPVAHGTVCKKGLS CCCCCCCCCCCHHHHHEECCCEEEEEECEEEEECCCCCEECCCCCCCCCCCHHHHHHHHH ALNDLRHPDRLTQPLLRENGELVPVSWTEALAYVSDALGPLLATQPTAVGVLGSGALTNE HHHHCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC KTYLLGKFARLALRTANIDYNGRYCMSSAATALNRTVGYDRGLGFPLEEISTSDLILLVG CHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEC ANIAETLPPVMQYLKRARDRGATVYAIDPRATPTAKVAGHHLAVRPGTDGILALGLLHLM CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCEEEECCCCCHHHHHHHHHHH KAWGRIRPTAPAHGMPEVLWQADDYPPASVASACGVAEDELMTLAKLYANAHKPLILTGR HHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECC GPEQHAYGTDTVQAYLNLAFLTGHFGKPGGGYGTLTGQGNGQGGREHGQKADQLPGARSL CCCCCCCCHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCHHHCCHHHHCCCHHHH RNPKHRREIAALWGCLPEDLPQPGLSAQELLNACGEAGGIEALIVLGSNPIVSAPGALQV CCHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHH RQRLSALKHLIVIDVLPSETAQLATLVLPGSMWCEEEGTTTNLEGRVQRRRQAITPPAAA HHHHHHHHHEEEEEECCCCCHHEEEEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCCCC REDWRILCDLAAAIGRPQGFTYATFRELQDEFFRATGGGVADYSGLSAERLDRASAQWPV CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCC RSADGPDTPYAYAPKYPTPDGLARLHVPSFPPLPLSHHLLLTTGRLGNQYQSGTQTRRNP CCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCHHHCCCCHHCCC ALRATLELQVHPETARERSLKPGDLARVTTSHGTLDLPVALNPGLRPDTLFMPFHWEASA CEEEEEEEEECCCHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEECCCC NLLTSPDRLDPHSRMPAFKATPATLMPVPVSVPEAQPARIAPLEGGVPI CEECCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCC >Mature Secondary Structure PSTPTPRRASATRVVRTTCPYCAVQCNFDLQIEDNLPVKATPTKECPVAHGTVCKKGLS CCCCCCCCCCHHHHHEECCCEEEEEECEEEEECCCCCEECCCCCCCCCCCHHHHHHHHH ALNDLRHPDRLTQPLLRENGELVPVSWTEALAYVSDALGPLLATQPTAVGVLGSGALTNE HHHHCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCC KTYLLGKFARLALRTANIDYNGRYCMSSAATALNRTVGYDRGLGFPLEEISTSDLILLVG CHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEEEEC ANIAETLPPVMQYLKRARDRGATVYAIDPRATPTAKVAGHHLAVRPGTDGILALGLLHLM CCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCEEEECCCCCHHHHHHHHHHH KAWGRIRPTAPAHGMPEVLWQADDYPPASVASACGVAEDELMTLAKLYANAHKPLILTGR HHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEECC GPEQHAYGTDTVQAYLNLAFLTGHFGKPGGGYGTLTGQGNGQGGREHGQKADQLPGARSL CCCCCCCCHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCCCCCHHHCCHHHHCCCHHHH RNPKHRREIAALWGCLPEDLPQPGLSAQELLNACGEAGGIEALIVLGSNPIVSAPGALQV CCHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCCHHHH RQRLSALKHLIVIDVLPSETAQLATLVLPGSMWCEEEGTTTNLEGRVQRRRQAITPPAAA HHHHHHHHHEEEEEECCCCCHHEEEEEECCCCEECCCCCCCCHHHHHHHHHHHCCCCCCC REDWRILCDLAAAIGRPQGFTYATFRELQDEFFRATGGGVADYSGLSAERLDRASAQWPV CHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCC RSADGPDTPYAYAPKYPTPDGLARLHVPSFPPLPLSHHLLLTTGRLGNQYQSGTQTRRNP CCCCCCCCCCEECCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCHHHCCCCHHCCC ALRATLELQVHPETARERSLKPGDLARVTTSHGTLDLPVALNPGLRPDTLFMPFHWEASA CEEEEEEEEECCCHHHHCCCCCCCCEEEEECCCCEEEEEEECCCCCCCEEEEEEEECCCC NLLTSPDRLDPHSRMPAFKATPATLMPVPVSVPEAQPARIAPLEGGVPI CEECCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCCCCEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969502; 9384377; 7868621 [H]