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The map label for this gene is yagI [H]

Identifier: 94971850

GI number: 94971850

Start: 109770

End: 110609

Strand: Direct

Name: yagI [H]

Synonym: Dgeo_2381

Alternate gene names: 94971850

Gene position: 109770-110609 (Clockwise)

Preceding gene: 94971852

Following gene: 94971848

Centisome position: 19.12

GC content: 67.98

Gene sequence:

>840_bases
ATGCTGGGGACGTTCGAGAAGGCCAGGGCCATCTTGGATCTGTACACCACGGAACGCTCGGAGTGGGGCGTCAGCGAGGT
GGCACGGCAGTTGGGGATGCCGACCTCGAGCGCGCACGTTCTGCTTGCCTCGCTGGCGGAGCTGGGGGTGCTGCACCGCA
CGGTGGCGGGCCGTTACCGGCTGGGGTTCAAGCTGCTCGCGCTGAGTCAGGTGCTGCTGGCGAACACGCCATGGCGGGAG
GTGGCACAGGAGGAGATGAACCGCCTGGGGCGGGCTTTGGGAGAGACCCTGCACCTGGCGGCCCTGGACGGAAACCAGGT
CGTGCTGGTCGCGGGGGTACCGGGCCATCTCCCCGGCAGCGTTCGCCTGCCCCGGGTGGGGACAGTCCTGTCTGCCTTGA
CCAGCGCGAGTGGCCAGGTCCTGCTGGCGCATCGGCCCCGGGAGGTGGTGGAGGCGGTGCTGGCCGCGACAGAAGACCCG
TTGACCTGGGACATTCTGGTGGAGTTGCTGGAGCAGGTCCGCACGGACGGGTGCGCCCGGGAGATTGGAAAGCCCGCGCT
GGGCCACAGTTCCCTGGCTGCTCCAGTGCGCAACCACAACGGCGAGGTGATCGCCGCGTTGGCCTGCAGCGTGCCCTCTG
ACCGCTTCCGCGACCGGGAAGGGCACCTGCGGGCAGCCCTGGTGCAAGCCTGCACCCAAATTTCTCTGCGCATAGGCTAT
CACCCGGAACTGTCCGGGAAGGGACTGTTGGTGTGGAGCTCGGTGGAGGGACGCGACAAACTGTACCCTGCGGCCCGGCG
CTCGGGTGCAAGACGCCGACCGAAGTCCCAAACTCCTTGA

Upstream 100 bases:

>100_bases
AGTGAGCCTCACTGTGCGGGATCGGGGCGCCGGGTGCAAGGCGGGTATCCCGCTATAGTGGAAGGCGACCTCGATCCGGC
AGGCGGCCAGGAGGACGGAA

Downstream 100 bases:

>100_bases
ACCCTGGGAATCGCTCGTTGATGCGGCAGTGACTGCGGCGACGTCAGGCCCTGACGAGATCCCTCGCTCAACGGCTGGCT
TCGATGCCGAGCACAGCCTC

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MLGTFEKARAILDLYTTERSEWGVSEVARQLGMPTSSAHVLLASLAELGVLHRTVAGRYRLGFKLLALSQVLLANTPWRE
VAQEEMNRLGRALGETLHLAALDGNQVVLVAGVPGHLPGSVRLPRVGTVLSALTSASGQVLLAHRPREVVEAVLAATEDP
LTWDILVELLEQVRTDGCAREIGKPALGHSSLAAPVRNHNGEVIAALACSVPSDRFRDREGHLRAALVQACTQISLRIGY
HPELSGKGLLVWSSVEGRDKLYPAARRSGARRRPKSQTP

Sequences:

>Translated_279_residues
MLGTFEKARAILDLYTTERSEWGVSEVARQLGMPTSSAHVLLASLAELGVLHRTVAGRYRLGFKLLALSQVLLANTPWRE
VAQEEMNRLGRALGETLHLAALDGNQVVLVAGVPGHLPGSVRLPRVGTVLSALTSASGQVLLAHRPREVVEAVLAATEDP
LTWDILVELLEQVRTDGCAREIGKPALGHSSLAAPVRNHNGEVIAALACSVPSDRFRDREGHLRAALVQACTQISLRIGY
HPELSGKGLLVWSSVEGRDKLYPAARRSGARRRPKSQTP
>Mature_279_residues
MLGTFEKARAILDLYTTERSEWGVSEVARQLGMPTSSAHVLLASLAELGVLHRTVAGRYRLGFKLLALSQVLLANTPWRE
VAQEEMNRLGRALGETLHLAALDGNQVVLVAGVPGHLPGSVRLPRVGTVLSALTSASGQVLLAHRPREVVEAVLAATEDP
LTWDILVELLEQVRTDGCAREIGKPALGHSSLAAPVRNHNGEVIAALACSVPSDRFRDREGHLRAALVQACTQISLRIGY
HPELSGKGLLVWSSVEGRDKLYPAARRSGARRRPKSQTP

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 iclR-ED (iclR effector binding) domain [H]

Homologues:

Organism=Escherichia coli, GI1786468, Length=249, Percent_Identity=30.5220883534137, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1788131, Length=234, Percent_Identity=31.1965811965812, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014757
- InterPro:   IPR005471
- InterPro:   IPR011991 [H]

Pfam domain/function: PF09339 HTH_IclR; PF01614 IclR [H]

EC number: NA

Molecular weight: Translated: 30119; Mature: 30119

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGTFEKARAILDLYTTERSEWGVSEVARQLGMPTSSAHVLLASLAELGVLHRTVAGRYR
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGFKLLALSQVLLANTPWREVAQEEMNRLGRALGETLHLAALDGNQVVLVAGVPGHLPGS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCCCCCCC
VRLPRVGTVLSALTSASGQVLLAHRPREVVEAVLAATEDPLTWDILVELLEQVRTDGCAR
CCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHH
EIGKPALGHSSLAAPVRNHNGEVIAALACSVPSDRFRDREGHLRAALVQACTQISLRIGY
HHCCCCCCCCHHHCHHHCCCCCEEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHEECC
HPELSGKGLLVWSSVEGRDKLYPAARRSGARRRPKSQTP
CCCCCCCEEEEEECCCCCHHCCHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MLGTFEKARAILDLYTTERSEWGVSEVARQLGMPTSSAHVLLASLAELGVLHRTVAGRYR
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LGFKLLALSQVLLANTPWREVAQEEMNRLGRALGETLHLAALDGNQVVLVAGVPGHLPGS
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCEEEEEECCCCCCCCC
VRLPRVGTVLSALTSASGQVLLAHRPREVVEAVLAATEDPLTWDILVELLEQVRTDGCAR
CCCCHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHH
EIGKPALGHSSLAAPVRNHNGEVIAALACSVPSDRFRDREGHLRAALVQACTQISLRIGY
HHCCCCCCCCHHHCHHHCCCCCEEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHEECC
HPELSGKGLLVWSSVEGRDKLYPAARRSGARRRPKSQTP
CCCCCCCEEEEEECCCCCHHCCHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]