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The map label for this gene is ydfJ [H]

Identifier: 94971840

GI number: 94971840

Start: 117780

End: 119000

Strand: Direct

Name: ydfJ [H]

Synonym: Dgeo_2371

Alternate gene names: 94971840

Gene position: 117780-119000 (Clockwise)

Preceding gene: 94971842

Following gene: 94971838

Centisome position: 20.51

GC content: 59.05

Gene sequence:

>1221_bases
GTGGCTTCTTTGGCGACCTATGGCGTCGGTTACGTGGCCCGGCCGATTGGGGCCTTTATGCTGGGGCGTTACGGCGATCG
CCACGGGCGCAAGAGCGTGTTGGTGTTGTGCATGCTGTTGATGGGCTTCTCGACCCTGGCGGTCGCCTTCTTGCCCACCT
ACCAGCAGGTTGGGGTCGTGGCCCCGTTGCTGTTGGTGATCTTGCGACTTATCCAGGGCTTTGCGGTTGCTGGTGAAATC
AGCGGCGCCAGCTCAATGATCTCCGAACACGCGCCTTTTGGTCGTCGGGGTTACTTTTCCAGTTTTGCACTCCAAGGAAC
ACAGATCGGACAACTGCTCGCCGCCGCCGTGTTTTTGCCGCTGGCCCACTTTCTGCCTGAGGAGGACTTCAACTCCTGGG
GTTGGCGTATTCCGTTTCTCCTGAGTCTATTGGTGCTGATCGCGGGATACTTCATTCGCCGCAACGTGGATGAGACGCCC
GCCTTTACTCGGGAAGAAGAGACGGGCAGTGTACCCGAGTCACCCATTCGCACGGCCTTCCGCTTGGGCGGGGCCGACAT
CTTCCGGGTGATGTGTATGGCCCTGATGAACGTTATTCCCACCATCACCACTGTGTTTGGGGCTGCCTACGCCACGCAAA
AGGACTACGGGATCGGGTTTTCCAAAGAGGTCTACTTATGGATTCCGGTGGTGGGAAATATCGTCGCCGCCCTGCTTATT
CCCTGGGTTGGCTCGCTCAGTGACCGCATTGGCCGCCGCCCGCCGATCATCTTCGGGGCCTTGGGCTCGGGATTGCTGTC
CTTTGGATATCTGTGGGCCATAGGACAACACAACGTCACGCTGGCCTTTGTCTTTTCGATCCTGATGTGGGGCATCGTCT
ATCAGGGATATAACGCCACGTTCCCCTCCTTTTATCCCGAACTGTTCCCTACCAAAACCCGCGTAACCTCGATGGCGATC
GGCCAGAACATCGGCACCATGCTGACCGCCTTCTTTCCCGTGCTGCTTTCGCAGTACATCGCGCCTCCGGGCAGCGCTGA
TATTCCCATCAAGGTGGGTCTCTTTACCCTCATGGTAACCATGATCTCAGCGGCGGCGGCCTACTCCGCCCGTGAAACTT
ACCGGATCCCCCTGAGCGAACTCGGCAACGCCAACGCCCAGCCTCTTCCCGCGGCTGAATACCTGCGACTGCGGGAAGGG
ACAGGAGGTAGGGCCCCCTGA

Upstream 100 bases:

>100_bases
TTCTTGGCCTTGCCATTCCTGACGCTCTGAACACTTCCGCACGCTGGGCACTCGAGCACCCCACCAGTACATCACGTCTT
CGCAGCCACTACCCGCCATT

Downstream 100 bases:

>100_bases
GCTCATTGCTCGATGCAGGCCGTTAAGGTTGTGCTTCGCAGGCGGCGCGCGCGTTTGCGCCGCTTCTCCGTATATAAGCG
TTCATCGGCCAGTTGTGGCA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MASLATYGVGYVARPIGAFMLGRYGDRHGRKSVLVLCMLLMGFSTLAVAFLPTYQQVGVVAPLLLVILRLIQGFAVAGEI
SGASSMISEHAPFGRRGYFSSFALQGTQIGQLLAAAVFLPLAHFLPEEDFNSWGWRIPFLLSLLVLIAGYFIRRNVDETP
AFTREEETGSVPESPIRTAFRLGGADIFRVMCMALMNVIPTITTVFGAAYATQKDYGIGFSKEVYLWIPVVGNIVAALLI
PWVGSLSDRIGRRPPIIFGALGSGLLSFGYLWAIGQHNVTLAFVFSILMWGIVYQGYNATFPSFYPELFPTKTRVTSMAI
GQNIGTMLTAFFPVLLSQYIAPPGSADIPIKVGLFTLMVTMISAAAAYSARETYRIPLSELGNANAQPLPAAEYLRLREG
TGGRAP

Sequences:

>Translated_406_residues
MASLATYGVGYVARPIGAFMLGRYGDRHGRKSVLVLCMLLMGFSTLAVAFLPTYQQVGVVAPLLLVILRLIQGFAVAGEI
SGASSMISEHAPFGRRGYFSSFALQGTQIGQLLAAAVFLPLAHFLPEEDFNSWGWRIPFLLSLLVLIAGYFIRRNVDETP
AFTREEETGSVPESPIRTAFRLGGADIFRVMCMALMNVIPTITTVFGAAYATQKDYGIGFSKEVYLWIPVVGNIVAALLI
PWVGSLSDRIGRRPPIIFGALGSGLLSFGYLWAIGQHNVTLAFVFSILMWGIVYQGYNATFPSFYPELFPTKTRVTSMAI
GQNIGTMLTAFFPVLLSQYIAPPGSADIPIKVGLFTLMVTMISAAAAYSARETYRIPLSELGNANAQPLPAAEYLRLREG
TGGRAP
>Mature_405_residues
ASLATYGVGYVARPIGAFMLGRYGDRHGRKSVLVLCMLLMGFSTLAVAFLPTYQQVGVVAPLLLVILRLIQGFAVAGEIS
GASSMISEHAPFGRRGYFSSFALQGTQIGQLLAAAVFLPLAHFLPEEDFNSWGWRIPFLLSLLVLIAGYFIRRNVDETPA
FTREEETGSVPESPIRTAFRLGGADIFRVMCMALMNVIPTITTVFGAAYATQKDYGIGFSKEVYLWIPVVGNIVAALLIP
WVGSLSDRIGRRPPIIFGALGSGLLSFGYLWAIGQHNVTLAFVFSILMWGIVYQGYNATFPSFYPELFPTKTRVTSMAIG
QNIGTMLTAFFPVLLSQYIAPPGSADIPIKVGLFTLMVTMISAAAAYSARETYRIPLSELGNANAQPLPAAEYLRLREGT
GGRAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Escherichia coli, GI1788292, Length=382, Percent_Identity=29.5811518324607, Blast_Score=175, Evalue=4e-45,
Organism=Escherichia coli, GI1790550, Length=403, Percent_Identity=27.7915632754342, Blast_Score=173, Evalue=1e-44,
Organism=Escherichia coli, GI1789941, Length=337, Percent_Identity=32.9376854599407, Blast_Score=155, Evalue=3e-39,
Organism=Escherichia coli, GI1788942, Length=259, Percent_Identity=33.5907335907336, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI87082231, Length=168, Percent_Identity=30.3571428571429, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI87082404, Length=324, Percent_Identity=22.8395061728395, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004736
- InterPro:   IPR020846
- InterPro:   IPR016196
- InterPro:   IPR005828 [H]

Pfam domain/function: PF00083 Sugar_tr [H]

EC number: NA

Molecular weight: Translated: 44053; Mature: 43922

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASLATYGVGYVARPIGAFMLGRYGDRHGRKSVLVLCMLLMGFSTLAVAFLPTYQQVGVV
CCCCHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APLLLVILRLIQGFAVAGEISGASSMISEHAPFGRRGYFSSFALQGTQIGQLLAAAVFLP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHH
LAHFLPEEDFNSWGWRIPFLLSLLVLIAGYFIRRNVDETPAFTREEETGSVPESPIRTAF
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
RLGGADIFRVMCMALMNVIPTITTVFGAAYATQKDYGIGFSKEVYLWIPVVGNIVAALLI
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHH
PWVGSLSDRIGRRPPIIFGALGSGLLSFGYLWAIGQHNVTLAFVFSILMWGIVYQGYNAT
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
FPSFYPELFPTKTRVTSMAIGQNIGTMLTAFFPVLLSQYIAPPGSADIPIKVGLFTLMVT
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
MISAAAAYSARETYRIPLSELGNANAQPLPAAEYLRLREGTGGRAP
HHHHHHHHHHHHHEECCHHHCCCCCCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
ASLATYGVGYVARPIGAFMLGRYGDRHGRKSVLVLCMLLMGFSTLAVAFLPTYQQVGVV
CCCHHHCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
APLLLVILRLIQGFAVAGEISGASSMISEHAPFGRRGYFSSFALQGTQIGQLLAAAVFLP
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHH
LAHFLPEEDFNSWGWRIPFLLSLLVLIAGYFIRRNVDETPAFTREEETGSVPESPIRTAF
HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
RLGGADIFRVMCMALMNVIPTITTVFGAAYATQKDYGIGFSKEVYLWIPVVGNIVAALLI
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHH
PWVGSLSDRIGRRPPIIFGALGSGLLSFGYLWAIGQHNVTLAFVFSILMWGIVYQGYNAT
HHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCC
FPSFYPELFPTKTRVTSMAIGQNIGTMLTAFFPVLLSQYIAPPGSADIPIKVGLFTLMVT
CCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
MISAAAAYSARETYRIPLSELGNANAQPLPAAEYLRLREGTGGRAP
HHHHHHHHHHHHHEECCHHHCCCCCCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]