Definition Deinococcus geothermalis DSM 11300 plasmid pDGEO01, complete sequence.
Accession NC_008010
Length 574,127

Click here to switch to the map view.

The map label for this gene is 94971838

Identifier: 94971838

GI number: 94971838

Start: 120471

End: 120710

Strand: Direct

Name: 94971838

Synonym: Dgeo_2369

Alternate gene names: NA

Gene position: 120471-120710 (Clockwise)

Preceding gene: 94971840

Following gene: 94971836

Centisome position: 20.98

GC content: 62.5

Gene sequence:

>240_bases
GTGGCCAAAAGGCGGCTGCCTCATCGGCGCCCTGGTCCATCTGAAGATTTCCCTTTTGTGCAAACCCCGTTGAACACCTT
GAAAACCTTCGCCCAGGCCAGCGCGTGCCGAGCCTCACCTGGTGTCGTCGTGGGTGCGCTGTTCGGGACAACTGGCTTTG
TCCGCATTGCCGCGCTTCACGCTGCGGAACAGGGAGGGAGTGCCGCGGGTCATTTCCGTGTGATGCGCCCCTGCACCTGA

Upstream 100 bases:

>100_bases
TGAGGCCGCCCGCTGAGCTGCTGTGGTCCCGCCAAGGGGAAGTTGCCAAAACTCCGCCTCATCACCCTTGGCGTTCTGAG
TCAACGCCCCTTCCTCAAAT

Downstream 100 bases:

>100_bases
TTGGTCAGGGTGGCGGCATTGGCCTTGAGGTAGGTGACCAGCGCGTCCAGGTCGACCAGGTTGGGCAGTTGCAGGACATT
GGTACCTTGGGTAAAGACGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 79; Mature: 78

Protein sequence:

>79_residues
MAKRRLPHRRPGPSEDFPFVQTPLNTLKTFAQASACRASPGVVVGALFGTTGFVRIAALHAAEQGGSAAGHFRVMRPCT

Sequences:

>Translated_79_residues
MAKRRLPHRRPGPSEDFPFVQTPLNTLKTFAQASACRASPGVVVGALFGTTGFVRIAALHAAEQGGSAAGHFRVMRPCT
>Mature_78_residues
AKRRLPHRRPGPSEDFPFVQTPLNTLKTFAQASACRASPGVVVGALFGTTGFVRIAALHAAEQGGSAAGHFRVMRPCT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8377; Mature: 8246

Theoretical pI: Translated: 12.05; Mature: 12.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRRLPHRRPGPSEDFPFVQTPLNTLKTFAQASACRASPGVVVGALFGTTGFVRIAALH
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHCCCHHHHHHHHH
AAEQGGSAAGHFRVMRPCT
HHCCCCCCCCCEEEECCCC
>Mature Secondary Structure 
AKRRLPHRRPGPSEDFPFVQTPLNTLKTFAQASACRASPGVVVGALFGTTGFVRIAALH
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEHHHCCCHHHHHHHHH
AAEQGGSAAGHFRVMRPCT
HHCCCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA