Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
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Accession | NC_007974 |
Length | 2,580,084 |
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The map label for this gene is 94312818
Identifier: 94312818
GI number: 94312818
Start: 434648
End: 435418
Strand: Direct
Name: 94312818
Synonym: Rmet_3890
Alternate gene names: NA
Gene position: 434648-435418 (Clockwise)
Preceding gene: 94312817
Following gene: 94312821
Centisome position: 16.85
GC content: 64.2
Gene sequence:
>771_bases ATGATCAGGACATGGGTCGGCGCGTGCGCCGCGGTTGCGACGCTATTCGCCTCGACCGTCCAGGCCGAGGACATTCGCGT GATGACATCGGGCGGATTCACGGCCGCCTACAAGATCCTGGGTCCGCAATTCGCCGGGGAGAGCGGCAACACGCTGGAAA CGACGCTTGGGCCGTCGATGGGGCAATCACCGGAAGCCATTCCGAACCGGCTGGCGCGCGGCGAGCAGGCCGACGTGGTG ATCATGGTCGGCTACGCGCTAGACGATCTGATCAAGAAGGGTGTAGTCGATCCGAAGTCGCGCGTCGAACTGGCTGATTC GCGCATCGGCATGGTGGTGCGGCAGGGCGAGGTGGTGCCCGATATCCGTACCGTGGACGCGCTGCGTCGCGCGCTGATGC AGGCGAAGTCGATTGCCTATTCCGATAGCGCCAGCGGCGTTTACGTTCAGCGTGAACTGTTCAAGCGGCTTGGTGAGCCG GAGGTACTGGGCGCCAAGGCGAAGAAGATCGAGAAGACCCCGGTGGCCTCGGTCGTCGCCAATGGCGAGTACGAGATCGG TTTCCAGCAGGTGAGCGAGCTGTTGCCGGTGTCTGGTGTGAGTTTCGCCGGACGCATCCCCGAGGACGTGCAGTCGATCA CGCGTTTCGCCGGCGGGATTCCTGTCAACGCTGCACACCCCGCGCTGGCAAAGGCGTTGCTCGACTACATGGCTGCGCCG GCCGCCCAGACGGTTGTGAAGGAGACGGGCCTCGATTCCGTCCCCCACTAG
Upstream 100 bases:
>100_bases GACGGCTTCACTAATTGTGGCTGGCTGCGCCGCCTGACGATACCTATAGTCCACGCCAGCGCGACTTTCCCCTACCGCGA CGACGATGGAGACATAAAAC
Downstream 100 bases:
>100_bases GTTTTTCGGAGACTGCAGTACTACCCCGGGGCCGGCGTTTGCCGGCCCTTTTTCATTGGGCGCCGATCTGGGCGATCACC ACGAGGATGACCGCCGCATT
Product: putative ABC transporter
Products: NA
Alternate protein names: ABC Transporter Periplasmic Molybdate; ABC Transporter; PROX Protein
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MIRTWVGACAAVATLFASTVQAEDIRVMTSGGFTAAYKILGPQFAGESGNTLETTLGPSMGQSPEAIPNRLARGEQADVV IMVGYALDDLIKKGVVDPKSRVELADSRIGMVVRQGEVVPDIRTVDALRRALMQAKSIAYSDSASGVYVQRELFKRLGEP EVLGAKAKKIEKTPVASVVANGEYEIGFQQVSELLPVSGVSFAGRIPEDVQSITRFAGGIPVNAAHPALAKALLDYMAAP AAQTVVKETGLDSVPH
Sequences:
>Translated_256_residues MIRTWVGACAAVATLFASTVQAEDIRVMTSGGFTAAYKILGPQFAGESGNTLETTLGPSMGQSPEAIPNRLARGEQADVV IMVGYALDDLIKKGVVDPKSRVELADSRIGMVVRQGEVVPDIRTVDALRRALMQAKSIAYSDSASGVYVQRELFKRLGEP EVLGAKAKKIEKTPVASVVANGEYEIGFQQVSELLPVSGVSFAGRIPEDVQSITRFAGGIPVNAAHPALAKALLDYMAAP AAQTVVKETGLDSVPH >Mature_256_residues MIRTWVGACAAVATLFASTVQAEDIRVMTSGGFTAAYKILGPQFAGESGNTLETTLGPSMGQSPEAIPNRLARGEQADVV IMVGYALDDLIKKGVVDPKSRVELADSRIGMVVRQGEVVPDIRTVDALRRALMQAKSIAYSDSASGVYVQRELFKRLGEP EVLGAKAKKIEKTPVASVVANGEYEIGFQQVSELLPVSGVSFAGRIPEDVQSITRFAGGIPVNAAHPALAKALLDYMAAP AAQTVVKETGLDSVPH
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27039; Mature: 27039
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTWVGACAAVATLFASTVQAEDIRVMTSGGFTAAYKILGPQFAGESGNTLETTLGPSM CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCEEEECCCCCC GQSPEAIPNRLARGEQADVVIMVGYALDDLIKKGVVDPKSRVELADSRIGMVVRQGEVVP CCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCEEEECCCCCC DIRTVDALRRALMQAKSIAYSDSASGVYVQRELFKRLGEPEVLGAKAKKIEKTPVASVVA CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHC NGEYEIGFQQVSELLPVSGVSFAGRIPEDVQSITRFAGGIPVNAAHPALAKALLDYMAAP CCCCEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC AAQTVVKETGLDSVPH HHHHHHHHCCCCCCCC >Mature Secondary Structure MIRTWVGACAAVATLFASTVQAEDIRVMTSGGFTAAYKILGPQFAGESGNTLETTLGPSM CCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHCCCCCCCCCCEEEECCCCCC GQSPEAIPNRLARGEQADVVIMVGYALDDLIKKGVVDPKSRVELADSRIGMVVRQGEVVP CCCCHHHHHHHHCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHCEEEECCCCCC DIRTVDALRRALMQAKSIAYSDSASGVYVQRELFKRLGEPEVLGAKAKKIEKTPVASVVA CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHC NGEYEIGFQQVSELLPVSGVSFAGRIPEDVQSITRFAGGIPVNAAHPALAKALLDYMAAP CCCCEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCC AAQTVVKETGLDSVPH HHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA