Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
---|---|
Accession | NC_007974 |
Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is 94312808
Identifier: 94312808
GI number: 94312808
Start: 425261
End: 425590
Strand: Direct
Name: 94312808
Synonym: Rmet_3880
Alternate gene names: NA
Gene position: 425261-425590 (Clockwise)
Preceding gene: 94312807
Following gene: 94312809
Centisome position: 16.48
GC content: 63.64
Gene sequence:
>330_bases ATGATGGCAGTACTTATCTTGTGTATTGTTTCGGCAGGCGCGCATGCACAGAGCCGGTTGATGGCAATGGGGGCGATGGG GGCGATGGGGGCGATGGGCGGTGCCGCGGGCGGCGACCGTATCGAGCATGCCGAAGCGGCGGCACAGCAATTGCAGGCCC GCTTCGCGAACGCGAACACCACGCATGACGGCAAACTGACCCGCGCCCAGGCGGCTGCCGGTATGCCGATGGTGGCGAAG CATTTCGACGAGATCGACACGCAGCGCAGCGGCTATGTGACGCTGCGGCAGATCGAGATTTTCATGGCCCAACGGATGTC GGCTCGCTGA
Upstream 100 bases:
>100_bases TGCCCGCGCACTGGGTCTGACTTGCACCGGTGCGCACCGGTGCGCGCCAGTCCAGATTGATTTCCCAACTTTTGCATCCA CGGAGTAGATCGTGAAGAAG
Downstream 100 bases:
>100_bases ACGCATGGGAGACGCGGCATGGAGCAGGTGAACCGGATAATCGTGCTCGATGACGAGGCGGAGCTGCGCAATATGCTGCA GCGCTTCCTGACCGGGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MMAVLILCIVSAGAHAQSRLMAMGAMGAMGAMGGAAGGDRIEHAEAAAQQLQARFANANTTHDGKLTRAQAAAGMPMVAK HFDEIDTQRSGYVTLRQIEIFMAQRMSAR
Sequences:
>Translated_109_residues MMAVLILCIVSAGAHAQSRLMAMGAMGAMGAMGGAAGGDRIEHAEAAAQQLQARFANANTTHDGKLTRAQAAAGMPMVAK HFDEIDTQRSGYVTLRQIEIFMAQRMSAR >Mature_109_residues MMAVLILCIVSAGAHAQSRLMAMGAMGAMGAMGGAAGGDRIEHAEAAAQQLQARFANANTTHDGKLTRAQAAAGMPMVAK HFDEIDTQRSGYVTLRQIEIFMAQRMSAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11493; Mature: 11493
Theoretical pI: Translated: 9.40; Mature: 9.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 10.1 %Met (Translated Protein) 11.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 10.1 %Met (Mature Protein) 11.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMAVLILCIVSAGAHAQSRLMAMGAMGAMGAMGGAAGGDRIEHAEAAAQQLQARFANANT CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC THDGKLTRAQAAAGMPMVAKHFDEIDTQRSGYVTLRQIEIFMAQRMSAR CCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MMAVLILCIVSAGAHAQSRLMAMGAMGAMGAMGGAAGGDRIEHAEAAAQQLQARFANANT CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC THDGKLTRAQAAAGMPMVAKHFDEIDTQRSGYVTLRQIEIFMAQRMSAR CCCCCHHHHHHHCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA