Definition | Cupriavidus metallidurans CH34 megaplasmid, complete sequence. |
---|---|
Accession | NC_007974 |
Length | 2,580,084 |
Click here to switch to the map view.
The map label for this gene is bugT
Identifier: 94312719
GI number: 94312719
Start: 326744
End: 327724
Strand: Direct
Name: bugT
Synonym: Rmet_3789
Alternate gene names: NA
Gene position: 326744-327724 (Clockwise)
Preceding gene: 94312718
Following gene: 94312723
Centisome position: 12.66
GC content: 62.69
Gene sequence:
>981_bases ATGGGTTTGACCCGCAAACTGCTGGGCGCGTGCGCCCTGACGCTTGCCTTTGCCGGCACTACCGTGCACGCGCAGGACAG CTATCCCTCCAAGCCGATCCGCTTCATCGTGCCGTTCGCGCCCGGTGGTGTGACAGACCTGACCGCGCGTACTTTCGCCA AGTACATGGGCGATGCCCTCAAGCAGCCGCTCGTTACCGAGAACAAGGCGGGCGCTGGCGCTACCATCGGCGCCAATTTC GTTGCCCATGCCGCACCTGACGGCTACACGATGCTGCTGGGTACCAACGTCACCCATGCCATCAACCCGCGCCTGATCGC CGCCACGCCGTATGACCCGCTCAAGGATTTCCAGACTGTCGCGATCTTCGGCCTGAATGGCAATGTGCTGCTAGTGAGCA ATTCGTTCCCGGCGAAGACTTTCGCCGAGTTCCTGGCGTACGTGAAAGCTCGCCCTGGCCGCGTCAACTACGCTTCTGGC AGCGTCGGCAGTTCCGCTCACCTGGCGGCTGAATTGCTCAAGCAGGACGTGAAGGGCCTCGACTATACGCATGTGCCATA TGGCGGTCCGTCCGAAGCCATGAGCGCGCTCATGGGTGGGCACGTCGATTTCCTGTTCGCCAATATTGGCGCAGCGGTCA CTCAGATCCAGTCCGGCAAGGTGAGGGCGCTCGCCGTTACTACCGCCAAGCGCGCGCCGCAGCTTCCCGATGTGCCGACC GTGGCGGAGTCTGGCGTGCCAGGGTTTGAAGTCGTGGGCTGGATGGCGGCATTCGTACCAAAGGGCACGCCGGCGCCTAC CATCGCGCGCCTGAACCAGGTCATCAATCAGGCACAGAAGAACCCCGATTTGCGCAAGACCCTGGATGCTGCAGCGCTGA TCCCCATTGTGGAGAGCCCCGAACAGAGCAGCCGCTTCGTGCGGGAGGAATACGAGAAATGGGGGCGCGTCATCCAAGCC GCCAACATACCGCCGCAGTAG
Upstream 100 bases:
>100_bases GCTACTGGAACGGCAAAGACCGACAAGTAGCCTGAAGTCGCAGCGACACCGGCCATGAAGGTGTCGCGCAAAGCCATCCA AAAAATAGAAGGAGACAATC
Downstream 100 bases:
>100_bases GCGGCGAGCGTCGACTCGGCGCCTTCCCTGCGTGGGGCGAACGGGGGTATCCGTTCAGCCCCCGCAGGAAGGCGCGTTTG GCCGTGGCCTTGTCGCGGCG
Product: extra-cytoplasmic solute receptor protein
Products: NA
Alternate protein names: ORF5 [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MGLTRKLLGACALTLAFAGTTVHAQDSYPSKPIRFIVPFAPGGVTDLTARTFAKYMGDALKQPLVTENKAGAGATIGANF VAHAAPDGYTMLLGTNVTHAINPRLIAATPYDPLKDFQTVAIFGLNGNVLLVSNSFPAKTFAEFLAYVKARPGRVNYASG SVGSSAHLAAELLKQDVKGLDYTHVPYGGPSEAMSALMGGHVDFLFANIGAAVTQIQSGKVRALAVTTAKRAPQLPDVPT VAESGVPGFEVVGWMAAFVPKGTPAPTIARLNQVINQAQKNPDLRKTLDAAALIPIVESPEQSSRFVREEYEKWGRVIQA ANIPPQ
Sequences:
>Translated_326_residues MGLTRKLLGACALTLAFAGTTVHAQDSYPSKPIRFIVPFAPGGVTDLTARTFAKYMGDALKQPLVTENKAGAGATIGANF VAHAAPDGYTMLLGTNVTHAINPRLIAATPYDPLKDFQTVAIFGLNGNVLLVSNSFPAKTFAEFLAYVKARPGRVNYASG SVGSSAHLAAELLKQDVKGLDYTHVPYGGPSEAMSALMGGHVDFLFANIGAAVTQIQSGKVRALAVTTAKRAPQLPDVPT VAESGVPGFEVVGWMAAFVPKGTPAPTIARLNQVINQAQKNPDLRKTLDAAALIPIVESPEQSSRFVREEYEKWGRVIQA ANIPPQ >Mature_325_residues GLTRKLLGACALTLAFAGTTVHAQDSYPSKPIRFIVPFAPGGVTDLTARTFAKYMGDALKQPLVTENKAGAGATIGANFV AHAAPDGYTMLLGTNVTHAINPRLIAATPYDPLKDFQTVAIFGLNGNVLLVSNSFPAKTFAEFLAYVKARPGRVNYASGS VGSSAHLAAELLKQDVKGLDYTHVPYGGPSEAMSALMGGHVDFLFANIGAAVTQIQSGKVRALAVTTAKRAPQLPDVPTV AESGVPGFEVVGWMAAFVPKGTPAPTIARLNQVINQAQKNPDLRKTLDAAALIPIVESPEQSSRFVREEYEKWGRVIQAA NIPPQ
Specific function: Unknown
COG id: COG3181
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0065 (bug) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005064 [H]
Pfam domain/function: PF03401 Bug [H]
EC number: NA
Molecular weight: Translated: 34409; Mature: 34278
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLTRKLLGACALTLAFAGTTVHAQDSYPSKPIRFIVPFAPGGVTDLTARTFAKYMGDAL CCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH KQPLVTENKAGAGATIGANFVAHAAPDGYTMLLGTNVTHAINPRLIAATPYDPLKDFQTV HCCCCCCCCCCCCCCCCCCHHEECCCCCEEEEEECCCCEECCCEEEEECCCCHHHCCCEE AIFGLNGNVLLVSNSFPAKTFAEFLAYVKARPGRVNYASGSVGSSAHLAAELLKQDVKGL EEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCC DYTHVPYGGPSEAMSALMGGHVDFLFANIGAAVTQIQSGKVRALAVTTAKRAPQLPDVPT CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCCCCCCCCC VAESGVPGFEVVGWMAAFVPKGTPAPTIARLNQVINQAQKNPDLRKTLDAAALIPIVESP HHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC EQSSRFVREEYEKWGRVIQAANIPPQ CHHHHHHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure GLTRKLLGACALTLAFAGTTVHAQDSYPSKPIRFIVPFAPGGVTDLTARTFAKYMGDAL CHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHH KQPLVTENKAGAGATIGANFVAHAAPDGYTMLLGTNVTHAINPRLIAATPYDPLKDFQTV HCCCCCCCCCCCCCCCCCCHHEECCCCCEEEEEECCCCEECCCEEEEECCCCHHHCCCEE AIFGLNGNVLLVSNSFPAKTFAEFLAYVKARPGRVNYASGSVGSSAHLAAELLKQDVKGL EEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCC DYTHVPYGGPSEAMSALMGGHVDFLFANIGAAVTQIQSGKVRALAVTTAKRAPQLPDVPT CCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEEHHCCCCCCCCCC VAESGVPGFEVVGWMAAFVPKGTPAPTIARLNQVINQAQKNPDLRKTLDAAALIPIVESP HHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC EQSSRFVREEYEKWGRVIQAANIPPQ CHHHHHHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9583950; 12910271 [H]