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The map label for this gene is flgC [H]

Identifier: 94312667

GI number: 94312667

Start: 278018

End: 278425

Strand: Direct

Name: flgC [H]

Synonym: Rmet_3735

Alternate gene names: 94312667

Gene position: 278018-278425 (Clockwise)

Preceding gene: 94312666

Following gene: 94312668

Centisome position: 10.78

GC content: 63.73

Gene sequence:

>408_bases
GTGGGAACGATGAGCATTTTCGATGTGGCGGGCTCGGCGATGGCCGCGCAGTCGCAACGCATGAACGTGACGGCTTCGAA
CCTGGCCAACGCGGACAGCGCGGTGGCCCCGAACGGGCAGCCGTATCGCGCCAAGCAGGTGATCTTCGAGATGGCGCCCA
CGCCCGGCCAGAGCGATGTTGGCGGCGTGCAGGTGGCTGGGGTGATGGAAGACACCGCGCCGGCGCGCATGGTGCACAAC
CCGAGCCATCCGCTCGCGGACGCCAACGGCTACGTGACGATGCCCAATGTGAATCCGGTGGAAGAGATGGTCAACATGAT
CTCCGCATCGCGTTCGTACCAGGCCAACGTCGAGGTGCTCAACACCGCCAAGAACATGATGCTGAAGACGCTGACCATCG
GTCAGTGA

Upstream 100 bases:

>100_bases
CGTTTGCCGACAACACCGTCCACTACGAAGCGGGCCTCACGGTGATGAGTTCCAAGATCAAGACGATGCTGGCCGCGATC
CAGAGCTGACGGAGACTGCC

Downstream 100 bases:

>100_bases
AGCCCAACCTTCCGAATCTCCAGGACTAGCCGGAACCCACCATGACCACCACTTCCAACGTTGGCAGCAGCACTACTTCG
GCCGTGAACCAGGCGCTGCA

Product: flagellar basal body rod protein FlgC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MGTMSIFDVAGSAMAAQSQRMNVTASNLANADSAVAPNGQPYRAKQVIFEMAPTPGQSDVGGVQVAGVMEDTAPARMVHN
PSHPLADANGYVTMPNVNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLTIGQ

Sequences:

>Translated_135_residues
MGTMSIFDVAGSAMAAQSQRMNVTASNLANADSAVAPNGQPYRAKQVIFEMAPTPGQSDVGGVQVAGVMEDTAPARMVHN
PSHPLADANGYVTMPNVNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLTIGQ
>Mature_134_residues
GTMSIFDVAGSAMAAQSQRMNVTASNLANADSAVAPNGQPYRAKQVIFEMAPTPGQSDVGGVQVAGVMEDTAPARMVHNP
SHPLADANGYVTMPNVNPVEEMVNMISASRSYQANVEVLNTAKNMMLKTLTIGQ

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=135, Percent_Identity=66.6666666666667, Blast_Score=184, Evalue=2e-48,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14198; Mature: 14067

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.9 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.2 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTMSIFDVAGSAMAAQSQRMNVTASNLANADSAVAPNGQPYRAKQVIFEMAPTPGQSDV
CCCCHHHHHCCCHHHHHHHCCCEEHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
GGVQVAGVMEDTAPARMVHNPSHPLADANGYVTMPNVNPVEEMVNMISASRSYQANVEVL
CCEEEEEECCCCCCCCEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCHHHH
NTAKNMMLKTLTIGQ
HHHHHHHHHHEECCC
>Mature Secondary Structure 
GTMSIFDVAGSAMAAQSQRMNVTASNLANADSAVAPNGQPYRAKQVIFEMAPTPGQSDV
CCCHHHHHCCCHHHHHHHCCCEEHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC
GGVQVAGVMEDTAPARMVHNPSHPLADANGYVTMPNVNPVEEMVNMISASRSYQANVEVL
CCEEEEEECCCCCCCCEEECCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCCCCCCHHHH
NTAKNMMLKTLTIGQ
HHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA