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The map label for this gene is flgB [H]

Identifier: 94312666

GI number: 94312666

Start: 277602

End: 278006

Strand: Direct

Name: flgB [H]

Synonym: Rmet_3734

Alternate gene names: 94312666

Gene position: 277602-278006 (Clockwise)

Preceding gene: 291481484

Following gene: 94312667

Centisome position: 10.76

GC content: 64.2

Gene sequence:

>405_bases
ATGGACAAACTTGACGCAGCGTTCCGCTTCCAGCAGGACGCCCTGAGCCTGAGGACACAGCGGCAATCGGTGATTGCCTC
GAACATCGCGCACGCCGACACGCCGGGCTACAAGGCCCGCGACTTCGACTTCGCCAGCACGCTGGCCCAGTCGGTGGAAC
GCGGCCAGCGCAGCGAGGGCACGTCGTTGTCCACCACGTCCGTGCGTCACCTGCCGGGGCAGGCGCCCACGTCCACCGGC
CATGAACTCGACTACCGCATTCCGCTGCAGTCGAGCATCGACGGCAACACGGTTGAAATGGATACCGAGCGCGTGGCGTT
TGCCGACAACACCGTCCACTACGAAGCGGGCCTCACGGTGATGAGTTCCAAGATCAAGACGATGCTGGCCGCGATCCAGA
GCTGA

Upstream 100 bases:

>100_bases
GAAGAAGCCCGACTGCGGCGCCGGACACGTATACCTGGCCACGCGACGGCGTTCTCCCCGCAATGCAGCCATTTGAAGCC
ACGCAGGAAAGGCAGACATC

Downstream 100 bases:

>100_bases
CGGAGACTGCCGTGGGAACGATGAGCATTTTCGATGTGGCGGGCTCGGCGATGGCCGCGCAGTCGCAACGCATGAACGTG
ACGGCTTCGAACCTGGCCAA

Product: flagellar basal body rod protein FlgB

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MDKLDAAFRFQQDALSLRTQRQSVIASNIAHADTPGYKARDFDFASTLAQSVERGQRSEGTSLSTTSVRHLPGQAPTSTG
HELDYRIPLQSSIDGNTVEMDTERVAFADNTVHYEAGLTVMSSKIKTMLAAIQS

Sequences:

>Translated_134_residues
MDKLDAAFRFQQDALSLRTQRQSVIASNIAHADTPGYKARDFDFASTLAQSVERGQRSEGTSLSTTSVRHLPGQAPTSTG
HELDYRIPLQSSIDGNTVEMDTERVAFADNTVHYEAGLTVMSSKIKTMLAAIQS
>Mature_134_residues
MDKLDAAFRFQQDALSLRTQRQSVIASNIAHADTPGYKARDFDFASTLAQSVERGQRSEGTSLSTTSVRHLPGQAPTSTG
HELDYRIPLQSSIDGNTVEMDTERVAFADNTVHYEAGLTVMSSKIKTMLAAIQS

Specific function: Unknown

COG id: COG1815

COG function: function code N; Flagellar basal body protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787313, Length=135, Percent_Identity=55.5555555555556, Blast_Score=157, Evalue=2e-40,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006300 [H]

Pfam domain/function: PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14635; Mature: 14635

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKLDAAFRFQQDALSLRTQRQSVIASNIAHADTPGYKARDFDFASTLAQSVERGQRSEG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
TSLSTTSVRHLPGQAPTSTGHELDYRIPLQSSIDGNTVEMDTERVAFADNTVHYEAGLTV
CCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCEEEECCCEEEECCCHHH
MSSKIKTMLAAIQS
HHHHHHHHHHHHCC
>Mature Secondary Structure
MDKLDAAFRFQQDALSLRTQRQSVIASNIAHADTPGYKARDFDFASTLAQSVERGQRSEG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCC
TSLSTTSVRHLPGQAPTSTGHELDYRIPLQSSIDGNTVEMDTERVAFADNTVHYEAGLTV
CCCCCCHHHHCCCCCCCCCCCCEEEECCCCCCCCCCEEEECCCEEEECCCEEEECCCHHH
MSSKIKTMLAAIQS
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]