Click here to switch to the map view.

The map label for this gene is flhF [H]

Identifier: 94312632

GI number: 94312632

Start: 240649

End: 243126

Strand: Direct

Name: flhF [H]

Synonym: Rmet_3700

Alternate gene names: 94312632

Gene position: 240649-243126 (Clockwise)

Preceding gene: 94312631

Following gene: 94312633

Centisome position: 9.33

GC content: 66.79

Gene sequence:

>2478_bases
ATGAGCGTGGCAAAGTTTGTGGCGGCCAACGGCCGTGAAGCGATGCGCAAGGTGCGCGAGGCGATGGGCCCGGATGCCGT
GGTGCTGTCGAACCGGACCATCGATGGTGGCGTGGAGATCGTCGCCATGCGCGACACCGATCTCGGCGCGGTGAACGCCA
ATGCGCAGCCTTATGTGTCGCCCACGCCGGCCGCATCCCAGATTCTTGAGACCGCCCCGGCGCAGATCGGCCCGATTGCC
ATCGCGGCGGCCAATGCCGTCGACGGGCAGGCTACCCGGACCGACGACGGTGCCATTGGCGATCTGCGTGGCGAGCTTGC
GTCGATGCGTTCGATGCTCGAGCGCCAGTTTGCTGGCCTGTCCAGCGGCGCCGGCAATGTGGCCGTGGGCGATCCGCTGC
GCGAGTCGCTGTTCGAGTGGATGGTGAACGCGGGCTTCTCTGGCCAGTTGTCACGTACGTTGATCTCCCGTCTGCCAGTG
GGTACCGATCGTCCGGCCGCCATGTCGTGGATTCGGCAGGAAATCGCGAAGAAGGTGCCTGTGCTGTCCAACGAGGACGC
TCTGTTCGATCAGGGCGGCGTGCTGGCGCTGATCGGACCGACCGGCGTGGGCAAGACCACCACCACGGCCAAGCTGGCCG
CGCGCTACGTGCTGCGCCACGGCGCCGATCGCCTGGCCTTGCTGACGACCGACCGCTTCCGGATCGGCGCGCACGAGCAG
CTTCGCATCTACGGCGACATTCTGGGCGTGCCGGTGCATGCGGTGAAAGACGCCGCTGACCTGCGTTTCGCGCTATCGGC
GATGAAGGACAAGCATCTGGTCATCATCGACACCGTTGGCATGAGCCAGCGCGATCGCAGCTTGTCCGACCAAATCGCGA
TGCTGGCTGGCGTGCAGGCGCCGATGCAGCGCGTGCTGCTGCTCAACGGCGCCGCGCATGGCGATACGCTCAATGAAGTC
GTGCACGCCTATCGGCACGACGCAGCCGGCGACGCTGGTGGCATCGACGGGTGCATCATCAGCAAGCTCGATGAAGCGAC
CCATCTGGGCTCGGTGCTCGATGTGGTGATCCGCCATCGCCTGCCGGTTTTCTATGCTTCCACTGGCCAGCGCGTGCCGG
AACATCTGGAACTCGCGCAGGCCAGCACACTGGTGGAACGCGCGTTCATGACGCCGCGTCGTGGCTCGCTGTTCAATGAC
GCCGACATGGCACGCCGCCATGCCGTTGCAGCGGACGCTGCAACGCCGCGCCCGGCCGAGCGCAATGGCGCCGATGACAT
GCTGCGTTCGTTGACTGACAGCGCTAATGCCGTAGGCACGTGCGTGGAAGAGTTGAACGCCGCAGGCTACGGCTTCGATG
TCGCGCGCCAGCTCTGGCAACAGCGCGGCGCCGGTGCCGTGGGATTGCGCCAGATGGGCCAGCAGGCACGCATGGCGATG
TGCCGCGACGCCAGCCGGGCCTGCGAGCGCTATGTGCTCGCCGTATCGCAGAATTTCACCCAGCCGGTGCAAGGTCGTCG
CGCGCCGCAGTTGATGCAATGCACCCTGTGGCTTGCCGATCGGGACGGGATGCCGCTGGCCGGTACCACCGCGCCCGTTG
GCCGTACGCGGCAGTCGATGTCAGAAGCGGACGCCGATGCCGAAGCCGAGACCGTGCGCGCCACGCTTTCTGCGGCACGT
ACCGTCGTCAACCTGAATGCTTCGGTGCCATCGGCCGCCGTGATTGCGCGCTGGCATCAGCTCGGTGAGCGCTGGGTGGC
GGGTACGCGTAAAACCGCGCGCGTGATCACTGGTGGCGCGGCCAGCAAGCTCGATGCGATCGCCGACACGCTGACGTTTC
ATGCGATTGGCGACACGACCTGGCGCGACCGCGACGCTGTGCACTGGGTTGGTCACTGTGCCGTGCGGATTCCGGAAGGG
ACGGTTCGTGCGGTTGGACGCGCTCGCGATAACACGGCCGAGACCGGCACCGAAGCGTGCCTCGTTGTCTCCCGCATGGC
GGATCGTGATACCGGCGAAACGCTGGCGGTCGAGTACGTGCTGTGCGACGCGGCGCTGACCGATGACGCCGCGCAGGTCG
CTCGCTGGATGCAATGGGCGAACGCCGCGGACGAGCAGTTCCGCACGCTGCGTCATGCCGCCGAACACTTCGCGCAGGAC
GGCGATGCGTCGGACAGTCAGGGGACCAGCCTGGTGTCGCTCCAGCTCGGGCTGACCACGCTGCGCCTGCAGCACACCCC
CACCGCAACCGCACCGGCGTTCCTGTCACGCCTGGCCGGCCGTGCCGCGACGCGTGCGAATGTGCCGGTGCCAGGCTCCG
TGCTCAACGAGGGCATGGGTCGCCTGCTGGCGCTACTGGATGTGCTGGAGAACTATCCCGGACGTGCCGCCTCGCCTGCG
CTCGTCGGTGATATCACTGCCGACGTGGCAATGCAGGCGACAGTCGGACTGCCGCAGTTGGCAGTCGCGGGGGAATAA

Upstream 100 bases:

>100_bases
CACCCTGCCGCAGTTGAAAGTGCTGTCGCATGCCGAAGTACCGGACAACCGCAATATCCGCATCACCGCCATGATCGGCG
GCGCAGCGTAAGGACTGAAC

Downstream 100 bases:

>100_bases
GCCTTGAACGTCATGGGTTCCGATCAGGCAGAAAGCCTGCGCCGTCTGCTGGCGCCGCGCGTCACCCGGCGCATCGCGGT
GGTTGCCGCCGATGCGGGGG

Product: flagellar biosynthesis regulator FlhF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 825; Mature: 824

Protein sequence:

>825_residues
MSVAKFVAANGREAMRKVREAMGPDAVVLSNRTIDGGVEIVAMRDTDLGAVNANAQPYVSPTPAASQILETAPAQIGPIA
IAAANAVDGQATRTDDGAIGDLRGELASMRSMLERQFAGLSSGAGNVAVGDPLRESLFEWMVNAGFSGQLSRTLISRLPV
GTDRPAAMSWIRQEIAKKVPVLSNEDALFDQGGVLALIGPTGVGKTTTTAKLAARYVLRHGADRLALLTTDRFRIGAHEQ
LRIYGDILGVPVHAVKDAADLRFALSAMKDKHLVIIDTVGMSQRDRSLSDQIAMLAGVQAPMQRVLLLNGAAHGDTLNEV
VHAYRHDAAGDAGGIDGCIISKLDEATHLGSVLDVVIRHRLPVFYASTGQRVPEHLELAQASTLVERAFMTPRRGSLFND
ADMARRHAVAADAATPRPAERNGADDMLRSLTDSANAVGTCVEELNAAGYGFDVARQLWQQRGAGAVGLRQMGQQARMAM
CRDASRACERYVLAVSQNFTQPVQGRRAPQLMQCTLWLADRDGMPLAGTTAPVGRTRQSMSEADADAEAETVRATLSAAR
TVVNLNASVPSAAVIARWHQLGERWVAGTRKTARVITGGAASKLDAIADTLTFHAIGDTTWRDRDAVHWVGHCAVRIPEG
TVRAVGRARDNTAETGTEACLVVSRMADRDTGETLAVEYVLCDAALTDDAAQVARWMQWANAADEQFRTLRHAAEHFAQD
GDASDSQGTSLVSLQLGLTTLRLQHTPTATAPAFLSRLAGRAATRANVPVPGSVLNEGMGRLLALLDVLENYPGRAASPA
LVGDITADVAMQATVGLPQLAVAGE

Sequences:

>Translated_825_residues
MSVAKFVAANGREAMRKVREAMGPDAVVLSNRTIDGGVEIVAMRDTDLGAVNANAQPYVSPTPAASQILETAPAQIGPIA
IAAANAVDGQATRTDDGAIGDLRGELASMRSMLERQFAGLSSGAGNVAVGDPLRESLFEWMVNAGFSGQLSRTLISRLPV
GTDRPAAMSWIRQEIAKKVPVLSNEDALFDQGGVLALIGPTGVGKTTTTAKLAARYVLRHGADRLALLTTDRFRIGAHEQ
LRIYGDILGVPVHAVKDAADLRFALSAMKDKHLVIIDTVGMSQRDRSLSDQIAMLAGVQAPMQRVLLLNGAAHGDTLNEV
VHAYRHDAAGDAGGIDGCIISKLDEATHLGSVLDVVIRHRLPVFYASTGQRVPEHLELAQASTLVERAFMTPRRGSLFND
ADMARRHAVAADAATPRPAERNGADDMLRSLTDSANAVGTCVEELNAAGYGFDVARQLWQQRGAGAVGLRQMGQQARMAM
CRDASRACERYVLAVSQNFTQPVQGRRAPQLMQCTLWLADRDGMPLAGTTAPVGRTRQSMSEADADAEAETVRATLSAAR
TVVNLNASVPSAAVIARWHQLGERWVAGTRKTARVITGGAASKLDAIADTLTFHAIGDTTWRDRDAVHWVGHCAVRIPEG
TVRAVGRARDNTAETGTEACLVVSRMADRDTGETLAVEYVLCDAALTDDAAQVARWMQWANAADEQFRTLRHAAEHFAQD
GDASDSQGTSLVSLQLGLTTLRLQHTPTATAPAFLSRLAGRAATRANVPVPGSVLNEGMGRLLALLDVLENYPGRAASPA
LVGDITADVAMQATVGLPQLAVAGE
>Mature_824_residues
SVAKFVAANGREAMRKVREAMGPDAVVLSNRTIDGGVEIVAMRDTDLGAVNANAQPYVSPTPAASQILETAPAQIGPIAI
AAANAVDGQATRTDDGAIGDLRGELASMRSMLERQFAGLSSGAGNVAVGDPLRESLFEWMVNAGFSGQLSRTLISRLPVG
TDRPAAMSWIRQEIAKKVPVLSNEDALFDQGGVLALIGPTGVGKTTTTAKLAARYVLRHGADRLALLTTDRFRIGAHEQL
RIYGDILGVPVHAVKDAADLRFALSAMKDKHLVIIDTVGMSQRDRSLSDQIAMLAGVQAPMQRVLLLNGAAHGDTLNEVV
HAYRHDAAGDAGGIDGCIISKLDEATHLGSVLDVVIRHRLPVFYASTGQRVPEHLELAQASTLVERAFMTPRRGSLFNDA
DMARRHAVAADAATPRPAERNGADDMLRSLTDSANAVGTCVEELNAAGYGFDVARQLWQQRGAGAVGLRQMGQQARMAMC
RDASRACERYVLAVSQNFTQPVQGRRAPQLMQCTLWLADRDGMPLAGTTAPVGRTRQSMSEADADAEAETVRATLSAART
VVNLNASVPSAAVIARWHQLGERWVAGTRKTARVITGGAASKLDAIADTLTFHAIGDTTWRDRDAVHWVGHCAVRIPEGT
VRAVGRARDNTAETGTEACLVVSRMADRDTGETLAVEYVLCDAALTDDAAQVARWMQWANAADEQFRTLRHAAEHFAQDG
DASDSQGTSLVSLQLGLTTLRLQHTPTATAPAFLSRLAGRAATRANVPVPGSVLNEGMGRLLALLDVLENYPGRAASPAL
VGDITADVAMQATVGLPQLAVAGE

Specific function: Necessary for flagellar biosynthesis. May be involved in translocation of the flagellum [H]

COG id: COG1419

COG function: function code N; Flagellar GTP-binding protein

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Escherichia coli, GI1789874, Length=263, Percent_Identity=25.8555133079848, Blast_Score=70, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR020006 [H]

Pfam domain/function: PF00448 SRP54 [H]

EC number: NA

Molecular weight: Translated: 87547; Mature: 87416

Theoretical pI: Translated: 6.61; Mature: 6.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAKFVAANGREAMRKVREAMGPDAVVLSNRTIDGGVEIVAMRDTDLGAVNANAQPYVS
CCHHHHHHCCCHHHHHHHHHHCCCCEEEEECCEECCCEEEEEEECCCCCEECCCCCCCCC
PTPAASQILETAPAQIGPIAIAAANAVDGQATRTDDGAIGDLRGELASMRSMLERQFAGL
CCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
SSGAGNVAVGDPLRESLFEWMVNAGFSGQLSRTLISRLPVGTDRPAAMSWIRQEIAKKVP
CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
VLSNEDALFDQGGVLALIGPTGVGKTTTTAKLAARYVLRHGADRLALLTTDRFRIGAHEQ
CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCHH
LRIYGDILGVPVHAVKDAADLRFALSAMKDKHLVIIDTVGMSQRDRSLSDQIAMLAGVQA
HEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHCHHHHHHHHHHHHHH
PMQRVLLLNGAAHGDTLNEVVHAYRHDAAGDAGGIDGCIISKLDEATHLGSVLDVVIRHR
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
LPVFYASTGQRVPEHLELAQASTLVERAFMTPRRGSLFNDADMARRHAVAADAATPRPAE
CCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
RNGADDMLRSLTDSANAVGTCVEELNAAGYGFDVARQLWQQRGAGAVGLRQMGQQARMAM
CCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
CRDASRACERYVLAVSQNFTQPVQGRRAPQLMQCTLWLADRDGMPLAGTTAPVGRTRQSM
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCHHHHHH
SEADADAEAETVRATLSAARTVVNLNASVPSAAVIARWHQLGERWVAGTRKTARVITGGA
HHCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEECCC
ASKLDAIADTLTFHAIGDTTWRDRDAVHWVGHCAVRIPEGTVRAVGRARDNTAETGTEAC
HHHHHHHHHHHHEEECCCCCCCCCCCHHEEEEEEEECCCHHHHHHHCCCCCCCCCCHHHH
LVVSRMADRDTGETLAVEYVLCDAALTDDAAQVARWMQWANAADEQFRTLRHAAEHFAQD
HHHHHHHCCCCCCEEEEEEEEECCHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
GDASDSQGTSLVSLQLGLTTLRLQHTPTATAPAFLSRLAGRAATRANVPVPGSVLNEGMG
CCCCCCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
RLLALLDVLENYPGRAASPALVGDITADVAMQATVGLPQLAVAGE
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCC
>Mature Secondary Structure 
SVAKFVAANGREAMRKVREAMGPDAVVLSNRTIDGGVEIVAMRDTDLGAVNANAQPYVS
CHHHHHHCCCHHHHHHHHHHCCCCEEEEECCEECCCEEEEEEECCCCCEECCCCCCCCC
PTPAASQILETAPAQIGPIAIAAANAVDGQATRTDDGAIGDLRGELASMRSMLERQFAGL
CCHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
SSGAGNVAVGDPLRESLFEWMVNAGFSGQLSRTLISRLPVGTDRPAAMSWIRQEIAKKVP
CCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
VLSNEDALFDQGGVLALIGPTGVGKTTTTAKLAARYVLRHGADRLALLTTDRFRIGAHEQ
CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCEECCCCHH
LRIYGDILGVPVHAVKDAADLRFALSAMKDKHLVIIDTVGMSQRDRSLSDQIAMLAGVQA
HEEEHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHCHHHHHHHHHHHHHH
PMQRVLLLNGAAHGDTLNEVVHAYRHDAAGDAGGIDGCIISKLDEATHLGSVLDVVIRHR
HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
LPVFYASTGQRVPEHLELAQASTLVERAFMTPRRGSLFNDADMARRHAVAADAATPRPAE
CCEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
RNGADDMLRSLTDSANAVGTCVEELNAAGYGFDVARQLWQQRGAGAVGLRQMGQQARMAM
CCCHHHHHHHHHHCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
CRDASRACERYVLAVSQNFTQPVQGRRAPQLMQCTLWLADRDGMPLAGTTAPVGRTRQSM
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEEEEECCCCCCCCCCCCCCCHHHHHH
SEADADAEAETVRATLSAARTVVNLNASVPSAAVIARWHQLGERWVAGTRKTARVITGGA
HHCCCCCHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEECCC
ASKLDAIADTLTFHAIGDTTWRDRDAVHWVGHCAVRIPEGTVRAVGRARDNTAETGTEAC
HHHHHHHHHHHHEEECCCCCCCCCCCHHEEEEEEEECCCHHHHHHHCCCCCCCCCCHHHH
LVVSRMADRDTGETLAVEYVLCDAALTDDAAQVARWMQWANAADEQFRTLRHAAEHFAQD
HHHHHHHCCCCCCEEEEEEEEECCHHCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCC
GDASDSQGTSLVSLQLGLTTLRLQHTPTATAPAFLSRLAGRAATRANVPVPGSVLNEGMG
CCCCCCCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
RLLALLDVLENYPGRAASPALVGDITADVAMQATVGLPQLAVAGE
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]