Definition | Cupriavidus metallidurans CH34 chromosome, complete genome. |
---|---|
Accession | NC_007973 |
Length | 3,928,089 |
Click here to switch to the map view.
The map label for this gene is yceG [C]
Identifier: 94310767
GI number: 94310767
Start: 1984549
End: 1985547
Strand: Reverse
Name: yceG [C]
Synonym: Rmet_1829
Alternate gene names: 94310767
Gene position: 1985547-1984549 (Counterclockwise)
Preceding gene: 94310771
Following gene: 94310766
Centisome position: 50.55
GC content: 64.86
Gene sequence:
>999_bases ATGAAACGTCTGTTCCTGCGCCTGGTCGGGGTTCTGGTGGTCTTCGCCATGGCCGCCGCCGGTGGCTTTGCCTGGTGGGC CCACCAGCCACTCGGCCTGACCACATCCCCCATCGAAGTCGTCATCAAGCCGAATTCCGGCGTTCTCAGCGTGGGTCGGC AGATCCAGCGCGGTGGCGTGGGCATGGATCCGCGCCTGTTCCAGATCCTGGTCCGCATCACCGGCCACGGCCCGGACCTC AAGGCCGGGGGCTACCAGTTCGAGACGGGCGCCACGCCGCTGGACGTGATCGGCAAACTGGCCCGGGGCGAGGTCACGCA CTACGTCGTGACCGTCATCGAGGGTTGGGAATTCCGCAAGATGCGCGCGGTCGTGGATGCCAACCCTGCGCTGAAGCACG ACACGGTGGGCATGTCCGACGCCGATTTGATGCACGCGATCGGCGCGGCCGAATCCGCGCCGGAAGGGCTGTTCTTTCCC GATACCTATCTGTTCGCGCGCGGCAGCAGCGATATCGAACTCTACAAGCACGCCTATCGCGCCATGCAGCGGCGGCTGAA CGAGGCCTGGAACGCACGCGCGCCCGACCTGCCGTACAAGACGCCGTATGAGGCGCTGGTGATGGCATCCATCGTTGAGA AGGAGACGGGGCAGGCGGCGGAGCGCCCGATGATCGCGGCCGTGTTCGTCAACCGTCTGCGCAAGAACATGATGCTGCAG ACCGATCCGACCGTGATCTACGGCCTGGGTGAGCAATTCGACGGCAACCTGCGCAAGAGGGATTTGCTGACGGACACCCC GTACAATACGTACACCCGTACGGGCCTGCCGCCGACGCCGATTGCCTTGCCGAGTCTGGCGTCGCTGGCCGCAGCCACGA CGCCGGCGCCATCGGACGCCTTGTATTTCGTGGCACGCGGCGACGGCAGCAGCCATTTCTCCAATTCACTACCCGAACAC AATCGCGCGGTCGACAAGTACCAGCGCGGCAAACCATAA
Upstream 100 bases:
>100_bases GCTCCCGGTATTATATGGGCCTGTCGCCATTCCGGCCGGCTGCCACCATGATCCCGACCCGCCGGCGGGGACATCGCGGC CGGTCTTTGCTTGCTACTAC
Downstream 100 bases:
>100_bases GGTCATGCGCGGAAAATTCATCACCTTCGAGGGCATCGATGGCGCGGGCAAGAGCACCCATATCGAGTGGGTGGCCGAGC GCCTGCGCGCGCGCGCAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MKRLFLRLVGVLVVFAMAAAGGFAWWAHQPLGLTTSPIEVVIKPNSGVLSVGRQIQRGGVGMDPRLFQILVRITGHGPDL KAGGYQFETGATPLDVIGKLARGEVTHYVVTVIEGWEFRKMRAVVDANPALKHDTVGMSDADLMHAIGAAESAPEGLFFP DTYLFARGSSDIELYKHAYRAMQRRLNEAWNARAPDLPYKTPYEALVMASIVEKETGQAAERPMIAAVFVNRLRKNMMLQ TDPTVIYGLGEQFDGNLRKRDLLTDTPYNTYTRTGLPPTPIALPSLASLAAATTPAPSDALYFVARGDGSSHFSNSLPEH NRAVDKYQRGKP
Sequences:
>Translated_332_residues MKRLFLRLVGVLVVFAMAAAGGFAWWAHQPLGLTTSPIEVVIKPNSGVLSVGRQIQRGGVGMDPRLFQILVRITGHGPDL KAGGYQFETGATPLDVIGKLARGEVTHYVVTVIEGWEFRKMRAVVDANPALKHDTVGMSDADLMHAIGAAESAPEGLFFP DTYLFARGSSDIELYKHAYRAMQRRLNEAWNARAPDLPYKTPYEALVMASIVEKETGQAAERPMIAAVFVNRLRKNMMLQ TDPTVIYGLGEQFDGNLRKRDLLTDTPYNTYTRTGLPPTPIALPSLASLAAATTPAPSDALYFVARGDGSSHFSNSLPEH NRAVDKYQRGKP >Mature_332_residues MKRLFLRLVGVLVVFAMAAAGGFAWWAHQPLGLTTSPIEVVIKPNSGVLSVGRQIQRGGVGMDPRLFQILVRITGHGPDL KAGGYQFETGATPLDVIGKLARGEVTHYVVTVIEGWEFRKMRAVVDANPALKHDTVGMSDADLMHAIGAAESAPEGLFFP DTYLFARGSSDIELYKHAYRAMQRRLNEAWNARAPDLPYKTPYEALVMASIVEKETGQAAERPMIAAVFVNRLRKNMMLQ TDPTVIYGLGEQFDGNLRKRDLLTDTPYNTYTRTGLPPTPIALPSLASLAAATTPAPSDALYFVARGDGSSHFSNSLPEH NRAVDKYQRGKP
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=288, Percent_Identity=40.2777777777778, Blast_Score=214, Evalue=5e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 36338; Mature: 36338
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLFLRLVGVLVVFAMAAAGGFAWWAHQPLGLTTSPIEVVIKPNSGVLSVGRQIQRGGV CHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCC GMDPRLFQILVRITGHGPDLKAGGYQFETGATPLDVIGKLARGEVTHYVVTVIEGWEFRK CCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCHHEEEEEECCCCCHHH MRAVVDANPALKHDTVGMSDADLMHAIGAAESAPEGLFFPDTYLFARGSSDIELYKHAYR HHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH AMQRRLNEAWNARAPDLPYKTPYEALVMASIVEKETGQAAERPMIAAVFVNRLRKNMMLQ HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCEEE TDPTVIYGLGEQFDGNLRKRDLLTDTPYNTYTRTGLPPTPIALPSLASLAAATTPAPSDA CCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCE LYFVARGDGSSHFSNSLPEHNRAVDKYQRGKP EEEEEECCCCHHHHCCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKRLFLRLVGVLVVFAMAAAGGFAWWAHQPLGLTTSPIEVVIKPNSGVLSVGRQIQRGGV CHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCC GMDPRLFQILVRITGHGPDLKAGGYQFETGATPLDVIGKLARGEVTHYVVTVIEGWEFRK CCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCHHEEEEEECCCCCHHH MRAVVDANPALKHDTVGMSDADLMHAIGAAESAPEGLFFPDTYLFARGSSDIELYKHAYR HHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHH AMQRRLNEAWNARAPDLPYKTPYEALVMASIVEKETGQAAERPMIAAVFVNRLRKNMMLQ HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHCEEE TDPTVIYGLGEQFDGNLRKRDLLTDTPYNTYTRTGLPPTPIALPSLASLAAATTPAPSDA CCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCE LYFVARGDGSSHFSNSLPEHNRAVDKYQRGKP EEEEEECCCCHHHHCCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]