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The map label for this gene is yfcH [H]

Identifier: 93007285

GI number: 93007285

Start: 3041055

End: 3042017

Strand: Reverse

Name: yfcH [H]

Synonym: Pcryo_2461

Alternate gene names: 93007285

Gene position: 3042017-3041055 (Counterclockwise)

Preceding gene: 93007286

Following gene: 93007284

Centisome position: 99.42

GC content: 44.24

Gene sequence:

>963_bases
ATGAATATTCTAATCAGCGGTGGTTCGGGATTTTTGGGTAGTGCTTTTAGCCAAGAGCTCTTGATGCGCTACCAACAGAT
GGGAAAAGCGTTACAGATTACTTGGTTGACCCGTGATAGTAATCAAGCACATCCTAGTGATATCACAATGATGACCTATG
ATGAACTTACAAAGTCAGATGCATACTTTGATGTGATTTTAAATCTAGCTGGCGCAGGTATTGCTGATGCGCGCTGGAGT
GACGATCGTAAAGAGCAATTGCTAGCCAGTCGAATGAAGCCGACAAAAGATATACTGGCATTTGTTGCCCGCAGTCATGT
AAAGCCAAAATTGCTTGTTAGTGGTTCCGCGATTGGTTGGTATGGCAATCAAGGCGTTAAACCCTTGACCGAGAGCAGTG
GTTTTCAGACAGATTTTGCCCATCAGTTATGTGATGATTGGGAGCAGCTGGCGCTACAAGCAACTGAGTTTGGTGTGCCA
GTGACGCTTGTGCGTACGGGTGTGGTCATCCATCCTACAGGCGGTATGCTTAGCAAGCTCTTAACCCCTTTTAAAATGGG
TGTTGGTGGACAATTAGGTGATGGTCAACAAATCATGAGTTGGATCAGCCGTGATGATTGGGTAGCGGCAGTAACATTTG
TTATAGAGCAGCAGCTTAATGACAGTGCTTTTCAGGTTAACGAGAATACGCTCCATCCAGCAAGCAATAACGACATGAAA
ATTTATAATCTAACCGCGCCAAATCCTGTCACTAATCATACTTTCACCAAAACATTGGGCGCTTGGCTACATCGTCCGAC
CTTTTTTACTTTGCCGGCGTTTTTACTCAAGCTGATATTTGGTGAAATGTCGACACTGCTCATTGATGGACAGAAGGTGC
TGCCGAAAGCATTGCTTGATGGTGGGTTTGAGTTTAAACATCAAACGTTTAAAGAAGCCTTGGAACAACAAGCAGTAAAA
TAG

Upstream 100 bases:

>100_bases
CTTATTACTTAGCCCTAACGTCTACACTTGTCCCCTTGTTTTCATAGTGTGCTTTTTGTCACACTGATGAGAATATAATC
AATAATAAGGATAATAAGTG

Downstream 100 bases:

>100_bases
TACTCATCAAATCTGGCATAATAAATCTATAGTAAGCGCTATAGCTATTTCATAGACTGAAAAAGCGGATTGTTTCACAT
GAAACAATCCGCTTTTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MNILISGGSGFLGSAFSQELLMRYQQMGKALQITWLTRDSNQAHPSDITMMTYDELTKSDAYFDVILNLAGAGIADARWS
DDRKEQLLASRMKPTKDILAFVARSHVKPKLLVSGSAIGWYGNQGVKPLTESSGFQTDFAHQLCDDWEQLALQATEFGVP
VTLVRTGVVIHPTGGMLSKLLTPFKMGVGGQLGDGQQIMSWISRDDWVAAVTFVIEQQLNDSAFQVNENTLHPASNNDMK
IYNLTAPNPVTNHTFTKTLGAWLHRPTFFTLPAFLLKLIFGEMSTLLIDGQKVLPKALLDGGFEFKHQTFKEALEQQAVK

Sequences:

>Translated_320_residues
MNILISGGSGFLGSAFSQELLMRYQQMGKALQITWLTRDSNQAHPSDITMMTYDELTKSDAYFDVILNLAGAGIADARWS
DDRKEQLLASRMKPTKDILAFVARSHVKPKLLVSGSAIGWYGNQGVKPLTESSGFQTDFAHQLCDDWEQLALQATEFGVP
VTLVRTGVVIHPTGGMLSKLLTPFKMGVGGQLGDGQQIMSWISRDDWVAAVTFVIEQQLNDSAFQVNENTLHPASNNDMK
IYNLTAPNPVTNHTFTKTLGAWLHRPTFFTLPAFLLKLIFGEMSTLLIDGQKVLPKALLDGGFEFKHQTFKEALEQQAVK
>Mature_320_residues
MNILISGGSGFLGSAFSQELLMRYQQMGKALQITWLTRDSNQAHPSDITMMTYDELTKSDAYFDVILNLAGAGIADARWS
DDRKEQLLASRMKPTKDILAFVARSHVKPKLLVSGSAIGWYGNQGVKPLTESSGFQTDFAHQLCDDWEQLALQATEFGVP
VTLVRTGVVIHPTGGMLSKLLTPFKMGVGGQLGDGQQIMSWISRDDWVAAVTFVIEQQLNDSAFQVNENTLHPASNNDMK
IYNLTAPNPVTNHTFTKTLGAWLHRPTFFTLPAFLLKLIFGEMSTLLIDGQKVLPKALLDGGFEFKHQTFKEALEQQAVK

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=321, Percent_Identity=28.6604361370716, Blast_Score=133, Evalue=3e-31,
Organism=Escherichia coli, GI1788642, Length=317, Percent_Identity=35.6466876971609, Blast_Score=208, Evalue=4e-55,
Organism=Drosophila melanogaster, GI28573846, Length=323, Percent_Identity=29.4117647058824, Blast_Score=139, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 35412; Mature: 35412

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILISGGSGFLGSAFSQELLMRYQQMGKALQITWLTRDSNQAHPSDITMMTYDELTKSD
CEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCEEEEEHHHHHCCC
AYFDVILNLAGAGIADARWSDDRKEQLLASRMKPTKDILAFVARSHVKPKLLVSGSAIGW
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCEEEE
YGNQGVKPLTESSGFQTDFAHQLCDDWEQLALQATEFGVPVTLVRTGVVIHPTGGMLSKL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCHHHHHH
LTPFKMGVGGQLGDGQQIMSWISRDDWVAAVTFVIEQQLNDSAFQVNENTLHPASNNDMK
HHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCEECCCCCCCEE
IYNLTAPNPVTNHTFTKTLGAWLHRPTFFTLPAFLLKLIFGEMSTLLIDGQKVLPKALLD
EEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHC
GGFEFKHQTFKEALEQQAVK
CCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNILISGGSGFLGSAFSQELLMRYQQMGKALQITWLTRDSNQAHPSDITMMTYDELTKSD
CEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCEEEEEHHHHHCCC
AYFDVILNLAGAGIADARWSDDRKEQLLASRMKPTKDILAFVARSHVKPKLLVSGSAIGW
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEECCEEEE
YGNQGVKPLTESSGFQTDFAHQLCDDWEQLALQATEFGVPVTLVRTGVVIHPTGGMLSKL
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCEEEECCCHHHHHH
LTPFKMGVGGQLGDGQQIMSWISRDDWVAAVTFVIEQQLNDSAFQVNENTLHPASNNDMK
HHHHHCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEECCCEECCCCCCCEE
IYNLTAPNPVTNHTFTKTLGAWLHRPTFFTLPAFLLKLIFGEMSTLLIDGQKVLPKALLD
EEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHC
GGFEFKHQTFKEALEQQAVK
CCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]