Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is aroK [H]
Identifier: 93006992
GI number: 93006992
Start: 2660563
End: 2661123
Strand: Reverse
Name: aroK [H]
Synonym: Pcryo_2168
Alternate gene names: 93006992
Gene position: 2661123-2660563 (Counterclockwise)
Preceding gene: 93006993
Following gene: 93006991
Centisome position: 86.97
GC content: 47.59
Gene sequence:
>561_bases ATGGTTGAGGAATTACCGTCGGTATTTTTGGTAGGGCCGATGGGAGCAGGGAAGACCACAATCGGCAGATTACTGGCAAA GCAGCTCGGGCGCTCGTTTGTAGACAGCGATTGGTATATCGAATCGCAGACCGGTGCCGATATCGCTTGGATATTTGCCA AAGAAGGTGAAGCGGGCTTTCGAGAACGGGAAACGCGTGCAATCGATGAGCTAACACAGCAACCGCAAATTGTTTTAGCG ACTGGCGGCGGTGCTGTGATGGCAGCTGAAAATCGTGAGTATTTAAAGCAGCGCGGTATCGTTATTTATCTCAACGCGCC TGTCGATGTACAAATGGCTCGTACTGCGAAAGACAAATCGCGTCCTTTATTACAGCAGCCAAACCCCAGAAAAATACTGC AAGGTTTATATAGCGCGCGTGATCCATTGTACAGGGAAGTAGCGCATATTATTATGCCAACAGGACATACGTATCCACGG CACATGGTCAATCAATTATTACAGCAGCTTAACTCATTTTGTATCTCTACGTCTGTCGATTCAGAGCCTGAAAAAGACTG A
Upstream 100 bases:
>100_bases TTTTTAGGCTGGCAAGGATTTTACTAACAATAATCACAGCTCATTACTAGCCAGAATATCAATGACGTTGTATCATACCT AATTTAGCTGAGTGAGTACT
Downstream 100 bases:
>100_bases TGTCAAAAAATGACTAGTATGACCAATATTATCGAATACCTATTTAGTTAAATTTTACTCGTAAGAATTAAGGAGATTTT CATGGCAACGCCACTGTTTC
Product: shikimate kinase
Products: NA
Alternate protein names: SK [H]
Number of amino acids: Translated: 186; Mature: 186
Protein sequence:
>186_residues MVEELPSVFLVGPMGAGKTTIGRLLAKQLGRSFVDSDWYIESQTGADIAWIFAKEGEAGFRERETRAIDELTQQPQIVLA TGGGAVMAAENREYLKQRGIVIYLNAPVDVQMARTAKDKSRPLLQQPNPRKILQGLYSARDPLYREVAHIIMPTGHTYPR HMVNQLLQQLNSFCISTSVDSEPEKD
Sequences:
>Translated_186_residues MVEELPSVFLVGPMGAGKTTIGRLLAKQLGRSFVDSDWYIESQTGADIAWIFAKEGEAGFRERETRAIDELTQQPQIVLA TGGGAVMAAENREYLKQRGIVIYLNAPVDVQMARTAKDKSRPLLQQPNPRKILQGLYSARDPLYREVAHIIMPTGHTYPR HMVNQLLQQLNSFCISTSVDSEPEKD >Mature_186_residues MVEELPSVFLVGPMGAGKTTIGRLLAKQLGRSFVDSDWYIESQTGADIAWIFAKEGEAGFRERETRAIDELTQQPQIVLA TGGGAVMAAENREYLKQRGIVIYLNAPVDVQMARTAKDKSRPLLQQPNPRKILQGLYSARDPLYREVAHIIMPTGHTYPR HMVNQLLQQLNSFCISTSVDSEPEKD
Specific function: Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate [H]
COG id: COG0703
COG function: function code E; Shikimate kinase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate kinase family [H]
Homologues:
Organism=Escherichia coli, GI87082255, Length=170, Percent_Identity=50, Blast_Score=178, Evalue=2e-46, Organism=Escherichia coli, GI1786587, Length=148, Percent_Identity=44.5945945945946, Blast_Score=124, Evalue=5e-30, Organism=Saccharomyces cerevisiae, GI6320332, Length=152, Percent_Identity=30.9210526315789, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 200 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000623 - InterPro: IPR023000 [H]
Pfam domain/function: PF01202 SKI [H]
EC number: =2.7.1.71 [H]
Molecular weight: Translated: 20771; Mature: 20771
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS01128 SHIKIMATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEELPSVFLVGPMGAGKTTIGRLLAKQLGRSFVDSDWYIESQTGADIAWIFAKEGEAGF CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCCH RERETRAIDELTQQPQIVLATGGGAVMAAENREYLKQRGIVIYLNAPVDVQMARTAKDKS HHHHHHHHHHHHCCCEEEEEECCCEEEEECCHHHHHHCCEEEEEECCCCCHHHHHHCHHC RPLLQQPNPRKILQGLYSARDPLYREVAHIIMPTGHTYPRHMVNQLLQQLNSFCISTSVD CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC SEPEKD CCCCCC >Mature Secondary Structure MVEELPSVFLVGPMGAGKTTIGRLLAKQLGRSFVDSDWYIESQTGADIAWIFAKEGEAGF CCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEEECCCCCH RERETRAIDELTQQPQIVLATGGGAVMAAENREYLKQRGIVIYLNAPVDVQMARTAKDKS HHHHHHHHHHHHCCCEEEEEECCCEEEEECCHHHHHHCCEEEEEECCCCCHHHHHHCHHC RPLLQQPNPRKILQGLYSARDPLYREVAHIIMPTGHTYPRHMVNQLLQQLNSFCISTSVD CCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCC SEPEKD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA