Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is 93006967
Identifier: 93006967
GI number: 93006967
Start: 2626007
End: 2626564
Strand: Reverse
Name: 93006967
Synonym: Pcryo_2143
Alternate gene names: NA
Gene position: 2626564-2626007 (Counterclockwise)
Preceding gene: 93006968
Following gene: 93006966
Centisome position: 85.84
GC content: 43.73
Gene sequence:
>558_bases ATGACCAACCAACTTAGTTTCGATGAACTACTCGATTATTTAGACAACGAAGAAAGCGCATTTGTACTTGATAGTGTTGC TACTCATGGTTTTTTGACTGCGACGGTTATTGGGCGTCCACTGCCTAATTGGTTAGAAGCACTGTTCGAAGATAATGTGA GCGAGATTCCAGCAAACGTGATTGATGGTATTCAGCGCTGGCGCGACTCTATCATCGCTGAGCTAAAAAACGAGACTCCT ATTGAGCTACCGTTTGGTGAAGATGCGGGCAATGAAGAAGTGGCGGTCGATTTTTCTGATGATTCAGATATCGTTGCTTG GTCGATTGGCTTTGTGGATGCAATGTATGGTGATGAAGCCAGTGATTGGATGGAAAACGAAGAGACTGCAGAAGATGTGG CTGTTTTGACCTTGCCGATGATTGTGCTGAGTGGTATCGATGATGAAGACCCTGAGCTTGCTGAGATGCGTAAAGACCAA GATAAAATGGTACAAATGGTAAACAGCATCGAAGGCAACTTAACTGAGCTGTTTTTGTTGTTCCATACTAACGACTAA
Upstream 100 bases:
>100_bases GACTTATTCAAGATAATCGTCATCTTTATACCTCTCGTTATTTTATATAACCCTTATTTATTGCGCATGACGCAATCCAT CTTTCAAGGACAACGACACC
Downstream 100 bases:
>100_bases AGAGTTTGCTCAATATAAATTATTTGAGCAATGTGCTTTTTAATGCGTTTTAAAATATCGTGCTTTTATCTTGAACGGGC GATATGTTTTTTATGATTCT
Product: YgfB and YecA
Products: NA
Alternate protein names: YgfB/YecA Family Protein
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTNQLSFDELLDYLDNEESAFVLDSVATHGFLTATVIGRPLPNWLEALFEDNVSEIPANVIDGIQRWRDSIIAELKNETP IELPFGEDAGNEEVAVDFSDDSDIVAWSIGFVDAMYGDEASDWMENEETAEDVAVLTLPMIVLSGIDDEDPELAEMRKDQ DKMVQMVNSIEGNLTELFLLFHTND
Sequences:
>Translated_185_residues MTNQLSFDELLDYLDNEESAFVLDSVATHGFLTATVIGRPLPNWLEALFEDNVSEIPANVIDGIQRWRDSIIAELKNETP IELPFGEDAGNEEVAVDFSDDSDIVAWSIGFVDAMYGDEASDWMENEETAEDVAVLTLPMIVLSGIDDEDPELAEMRKDQ DKMVQMVNSIEGNLTELFLLFHTND >Mature_184_residues TNQLSFDELLDYLDNEESAFVLDSVATHGFLTATVIGRPLPNWLEALFEDNVSEIPANVIDGIQRWRDSIIAELKNETPI ELPFGEDAGNEEVAVDFSDDSDIVAWSIGFVDAMYGDEASDWMENEETAEDVAVLTLPMIVLSGIDDEDPELAEMRKDQD KMVQMVNSIEGNLTELFLLFHTND
Specific function: Unknown
COG id: COG3318
COG function: function code R; Predicted metal-binding protein related to the C-terminal domain of SecA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20708; Mature: 20577
Theoretical pI: Translated: 3.44; Mature: 3.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNQLSFDELLDYLDNEESAFVLDSVATHGFLTATVIGRPLPNWLEALFEDNVSEIPANV CCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCHHH IDGIQRWRDSIIAELKNETPIELPFGEDAGNEEVAVDFSDDSDIVAWSIGFVDAMYGDEA HHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHCCCCH SDWMENEETAEDVAVLTLPMIVLSGIDDEDPELAEMRKDQDKMVQMVNSIEGNLTELFLL HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCHHHEEEE FHTND EECCC >Mature Secondary Structure TNQLSFDELLDYLDNEESAFVLDSVATHGFLTATVIGRPLPNWLEALFEDNVSEIPANV CCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHCCHHH IDGIQRWRDSIIAELKNETPIELPFGEDAGNEEVAVDFSDDSDIVAWSIGFVDAMYGDEA HHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEEEEECCCCCEEEEEHHHHHHHCCCCH SDWMENEETAEDVAVLTLPMIVLSGIDDEDPELAEMRKDQDKMVQMVNSIEGNLTELFLL HHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHCCCHHHEEEE FHTND EECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA