Definition | Psychrobacter cryohalolentis K5 chromosome, complete genome. |
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Accession | NC_007969 |
Length | 3,059,876 |
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The map label for this gene is ybjQ [C]
Identifier: 93006966
GI number: 93006966
Start: 2625390
End: 2625866
Strand: Reverse
Name: ybjQ [C]
Synonym: Pcryo_2142
Alternate gene names: 93006966
Gene position: 2625866-2625390 (Counterclockwise)
Preceding gene: 93006967
Following gene: 93006965
Centisome position: 85.82
GC content: 46.96
Gene sequence:
>477_bases ATGACTGTCCAACTCTCCAATCTTGAGCACTTGCCCAACTATCAGATTACTGAGCGCTTGGATGTGGTATACGGCAGTAC CGTGCGCTCAAAGCATGTTGGTAAAGATTTATTTGCGGGTCTAAAAAACATCGTAGGCGGTGAACTCACCGCCTATACGG AGCTGTTAGAAGAATCGCGTCAAGAGGCGATTGATCGTATGATCGTCAAAGCTGAGGCGTTGGGCGCTGATGCAGTGGTT GGACTGCGTTTCTCGACCTCTAGTATTGCACAAGGTGCCTCTGAGCTATTTGTTTATGGTACAGCGGTCAAAGCCGTACG GATGCCACAACAGCCTGTCTATCAATCAACGAATCAACCGCCGAATCAGTCATCAAATCATCATTCTCAATATGAAGAGC CTGTGGCGTCAGTTGCTCAGCCTTCAACAGTAAAGTCACCTGATGATTTACCACGCTTTAATCCTTTTGGTGAATAA
Upstream 100 bases:
>100_bases TAATGCGTTTTAAAATATCGTGCTTTTATCTTGAACGGGCGATATGTTTTTTATGATTCTGTAAGTCATTAATTCTGTAG ATTACCAATAAGGCTGTACT
Downstream 100 bases:
>100_bases GACTACGCTCAAGTACTGACTGGTAGCCTTTTTGATGATAAGAGACGTTCCATGAATCAATCGTTCAGCCAAATGTTGAT GAACTATGCGCCGCTGCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MTVQLSNLEHLPNYQITERLDVVYGSTVRSKHVGKDLFAGLKNIVGGELTAYTELLEESRQEAIDRMIVKAEALGADAVV GLRFSTSSIAQGASELFVYGTAVKAVRMPQQPVYQSTNQPPNQSSNHHSQYEEPVASVAQPSTVKSPDDLPRFNPFGE
Sequences:
>Translated_158_residues MTVQLSNLEHLPNYQITERLDVVYGSTVRSKHVGKDLFAGLKNIVGGELTAYTELLEESRQEAIDRMIVKAEALGADAVV GLRFSTSSIAQGASELFVYGTAVKAVRMPQQPVYQSTNQPPNQSSNHHSQYEEPVASVAQPSTVKSPDDLPRFNPFGE >Mature_157_residues TVQLSNLEHLPNYQITERLDVVYGSTVRSKHVGKDLFAGLKNIVGGELTAYTELLEESRQEAIDRMIVKAEALGADAVVG LRFSTSSIAQGASELFVYGTAVKAVRMPQQPVYQSTNQPPNQSSNHHSQYEEPVASVAQPSTVKSPDDLPRFNPFGE
Specific function: Unknown
COG id: COG0393
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0145 family [H]
Homologues:
Organism=Escherichia coli, GI1787091, Length=107, Percent_Identity=38.3177570093458, Blast_Score=68, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002765 [H]
Pfam domain/function: PF01906 DUF74 [H]
EC number: NA
Molecular weight: Translated: 17291; Mature: 17159
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVQLSNLEHLPNYQITERLDVVYGSTVRSKHVGKDLFAGLKNIVGGELTAYTELLEESR CEEECCCCCCCCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH QEAIDRMIVKAEALGADAVVGLRFSTSSIAQGASELFVYGTAVKAVRMPQQPVYQSTNQP HHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHCCCCC PNQSSNHHSQYEEPVASVAQPSTVKSPDDLPRFNPFGE CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TVQLSNLEHLPNYQITERLDVVYGSTVRSKHVGKDLFAGLKNIVGGELTAYTELLEESR EEECCCCCCCCCCHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHH QEAIDRMIVKAEALGADAVVGLRFSTSSIAQGASELFVYGTAVKAVRMPQQPVYQSTNQP HHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCHHHHHHHHHHHHHHHCCCCCHHHCCCCC PNQSSNHHSQYEEPVASVAQPSTVKSPDDLPRFNPFGE CCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA